Gene detail

Detailed information of KAG7255683.1 in Coryphaenoides rupestris Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
KAG7255683.1	IONOTROPIC GLUTAMATE RECEPTOR	PIJE02003456.1	25873	30588	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAG7255683.1

ATGGAGGAGCTGGAGGCCCAGTGGCTGACGGGGATCTGCCACAACGAGAAGAACGAGGTGATGTCCAGCCAGCTGGACGTGGACAACATGGCGGGCGTCTTCTACATGCTGGCCACCGCCATGGGCCTGTCCCTCATCACCTTCGTGTCCGAGCACCTGTTCTACTGGCGGCTGCGCTACTGCTTCTCCGGCGTGTGCACAGGCCAGCCGGGCCTGCTCTTCTCCATCAGCAGGGGAATCTGGAGTTGCATTCATGGCGTCCACATCGACATGAAGAAGAAGACGGACCTGGACTTCAGCCCGCAGGCCAACATGCTGAAGCTGATCAAGTCGGCCAAGCAGATGACCAACATGTCCACCCTGGGCGGCTCCCGCATCAACTCGCCCAAGCGGGAGTTCATGCACTCCGCCGGGCCCATGATCATGGACATGATGGCGGAGAAGGGCAACTTCATCTACGCCGACAACCGCAGCTACGCACCCAAGGACGTGATCTACGGCGACACGGGGGACCTGCAGTCGTACCTCTCCAACCGCCACAAGGACCACCTCAACAACTACATCTTCCAGGGAGGCCAGCACCCGCTGACCCTGAACGACGCCAATCCCAACACGGTGGAGGTGGCGGTGAGCGCTGACGCCGCACAGACCGCCAACGCCAAGCCGCCCCGGGCGCTGTGGAAGAAGTCGGTGGACACACTGCGCGCGGGGCCGCCGGGCGCCGGCCAGCCGATGCCCGACATGCTGATGCCCGACCCGCGAATGTCGATGAAGACGCAGCGCTACCTCCCCGAGGACGCGGCCCACTCCGACATCTCCGAGTGCTCCAGCCGGGCTGCCTCCTACAAGGACCCAGATAACAACAAGCACCTGAAGTCCAAGGACAACTTAAAAAAAAGATCTGTGACGTCGAAATACCCCAGGGATTGCAGCGAGGTGGAATTGTCCTACTTAAAGACTAAGCAGGTCGGTGGCGGAGCCAACCAAGCCGGGAGAGGAGGAGGAGGAGTAGGAGTAGGAGGAGAAAAAATATACACCATCGACTCTGACCGAGAGCTCAGTCTGCACTCAGATCCCGCCCTGTACCGCGAGAGCCGGGGCCTGGCTGCAGATGACTTGGACTATCCAGAGATGTACTCAGACCACAACGACAACTACAGGAAGTGTGACCAGCCAATCATACACCTTAACTCTTCCCCCCTGCACCACACAGACTCTGACCTCCTGCCGGACAACGCCTACCCCAAACACTATAACTTGAAAGAGAAAAACCTTTCCCTGTCCCCGCACGAGTCCAACGATCGCTACAAACAGACCCACTGTCGCTCCTGCTTGTCCAAAGTGATGCCCGGCTACCCCGGAGGAGTGCCGTACACGCCCGCCACCGCCTCCACCTCGGCCGCCGCCAACACCCGCTCCCCGTACAACCGCTGTGAGGCCTGCCTGCACACGGCCAACCTCTACGACATCAGCGAGGACCAGCTCCTCGCCGACGCCCTCATCAATCCCAGCATGCACCACCAGCAGCTGCAGCAGCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCGCTGGACGAGATGTTTGGGCTGTACTGGCCCCAGACGGATGGGCCTCACGTCCAGAAACGGAACCGTCTGAGGCTGAGCCGGCAGCACTCCTTCGACAACATCATGCTGGAGAAGCCCAAGGACGTGGACCTGGGCCGGCCGGCGCGCAGCGTCAGCCTGAAGGAGAAGGACCGTTTCCTGGACTCTGCGTCCGACACCCCCTACGCCAACCTCTTCGGCGTGCGGCCCTACTCCGGCAGGCTGTTTGGCACCGGCTCCAGGTCCATGATGTTCAACCACACGCTGGAGGAGAGCAAGCGGAGCAAGTCCCTGTACCCGGACCATGGCTCGGACAACCCTTTCCTCAGCCACTCACTGCGGGAGGACCCCAGCAGCAGACTGATCCACGGACGCAGCTCCTCTGATATTTACAAACAGCTGGCCGCCTCCTCGTCGGTCGCCGCCCTGGGCGTGGCACCCGCCAAAACGCGCAACGACGCGAACAATCTGCGCTCCTCCGTCAAATCCACGACCTCATACTGCTCACGAGACGGGCGGATAGCCAACGACATGTACACTGCAGAGCATGCAATGCCTTATTCTGCCAATAAGACTGGCGCTTACCCGGCCACGCGAGGCGTCCTAAACTCAGCCCAGTTCAGTAATAGACGGGTCTATAAGAAAATCCCCAGTCTGGAGTCAGACGTTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10565	NMDAR2_C	N-methyl D-aspartate receptor 2B3 C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015683	Family	Ionotropic glutamate receptor	Interproscan
IPR018884	Domain	Glutamate [NMDA] receptor, epsilon subunit, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18966	IONOTROPIC GLUTAMATE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004972	Molecular Function	NMDA glutamate receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0015276	Molecular Function	ligand-gated monoatomic ion channel activity	Interproscan
GO:0017146	Cellular Component	NMDA selective glutamate receptor complex	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0060079	Biological Process	excitatory postsynaptic potential	Interproscan
GO:0060291	Biological Process	long-term synaptic potentiation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-