Detailed information of KAG7249496.1 in Coryphaenoides rupestris Gene info
Gene IDAnnotationScaffoldStartEndStrand
KAG7249496.1PRE-MRNA SPLICING FACTOR PRP8PIJE02015267.115444020+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10596U6-snRNA_bdgU6-snRNA interacting domain of PrP8DomainInterproscan
PF12134PRP8_domainIVPRP8 domain IV coreDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR019580DomainPre-mRNA-processing-splicing factor 8, U6-snRNA-bindingInterproscan
IPR021983DomainPRP8 domain IV coreInterproscan
IPR027652FamilyPre-mRNA-processing-splicing factor 8Interproscan
IPR043172Homologous_superfamilyPrp8 RNase domain IV, palm regionInterproscan
IPR043173Homologous_superfamilyPrp8 RNase domain IV, fingers regionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11140PRE-MRNA SPLICING FACTOR PRP8Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000244Biological Processspliceosomal tri-snRNP complex assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0017070Molecular FunctionU6 snRNA bindingInterproscan
GO:0030619Molecular FunctionU1 snRNA bindingInterproscan
GO:0030620Molecular FunctionU2 snRNA bindingInterproscan
GO:0030623Molecular FunctionU5 snRNA bindingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:0097157Molecular Functionpre-mRNA intronic bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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