Detailed information of Hgig_26331 in Hirondellea gigas Gene info
Gene IDAnnotationChromosomeStartEndStrand
Hgig_26331U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINChromosome29227825754227931494+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04158Sof1Sof1-like domain FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR007287DomainSof1-like proteinInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051733FamilyWD repeat-containing DCAF13/WDSOF1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR22851U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP