Gene detail

Detailed information of Hgig_23056 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_23056	HIV-INDUCED PROTEIN-7-LIKE PROTEASE	Chromosome25	134396164	134455024	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_23056

ATGTCTACAATATTTAGACTGCGTGTAAGAAGCGCATTACAGCAGAATATTCCTCTCATTGACTTCCTCACGCCTGAATCTACATTTGAGAATTTAAATCAGGTTTTGGCCTCTGCTTCCGAAATACCAGAACAACAACTCAAAGTTCTGTGTGGTTATCCTCCAAAAGTGCTCCAAGGTGCGAGAGAATCCATGCTACAAGAAATTGGCATAAAAAATGGAGAAGTTTTAATTATTGAAAAGAGATCAGCAACTGATCCTCCACAGTACTGTGAAGCAACTAAAAAAATGACACATCTTTTAAGTAATTTAAACAATAAATTACAGGATAATGCCTCGCAGCCAAAGGAATCTACCCACGGTGTCCAACTAAACTCCTCCAATGATAAATCTGCTGCCAATGTCAATAGTGTTATAAGTTCCAGTAAAGTGGCAAGTGAGGGCCAGAACAGCAATGGCAAGGTTCGCAAGAGAGCTCCCAGTGATGGAAAGACATCGCCTGCTGGCAAGAAATCTGCAGCGGAGCCTTCAGAGGTTAGATTTCGTGAGGCACCAGCCGGAATTTATCTTGCACCTGGTTCACAACTGGGTATTCTGCAAAAACGAGAGGTGCCTTCTGACAACTCCTGCCTTTTTGCATCCATGGATTATGTTCTTAATGGTGTCATCAGCAGCCCCCGCACAAAGGAACTTCGTCGTGAAGTGTCTGAAGGAGTTCTGCAGGAGGAAGAGCTCATTCCTGATTGTGTGATGGACCGGCCCCGTCAGGAGTACAGCACGTGGATCATGAGGGAGCAGTCATGGGGCGGTGAAATAGAGCTGGCAATACTCAGCAAATACCACAAGCTCGAGATTGTTACTGTTGATGCCAAAACTGCGAGAGTCAACAGGTTTGGTGAGTCTGAGAACTACAAAGCGCGCGTGTTTCTGCTCTACGACGGCATCCACTACGACCCCTTGCACATGGAGAACCTCCGCGTTGAGGGCAAGTTCTTCACATCATTCCCTGGCACACTGGACGCGGTGCTGGCTCAGGCCGTGGACATGGCCGGGCAGGCGCACCAGAGCGGGAGCTTCACTGACACGGACAACTTCACGCTGCAATGTGGCGAGTGCGGCCACAAACTAAAGGGTGAAGCGGAGGCCTTGCAGCACGCTAAGCAGACCACACATACAGACTTCCAGGAGTTCTTAACCGTTCGCTCGACTTCTGTGGACGACCTGGGGTTGGAGGTGGACAAGTTCAAGGCAAACAAACAGATTGAACGCCACATTGGAGGAAGACCGAAGACAATAACAGAGACAAGAGCAGGTGAACTTCTAGTAGAAGTGCCCACCCTAAAACAAAGCCAAGCCATTAACAACCTGTACAGGCTAGACAGGAGGAGACCTCGTGAAGGTTCATCGTATGTCGAAGTAGTAGTGCAGGAGCATGACCGCCTCAATCAAACAAAAGGCACCATCTATTACCGAAATAGACAAGATTATACTGACGAGGAACTGCTAGAGGAACTAAAGACATCCAAAGTCAAAGAACTCTACCAAATAAAACGAAGACGAAATGGCATCCAGGAAAAGTTTCCTGTATACATCTTAACTTTTAATACTTGTAATCTCCCATCGGAAGTTGGGCTTGGATGGACCAGGTGCTCAGTGAGGGAGTACGTGCCACAACCCAGAAGATGCTACAACTGTCAACAGTTTGGCCACGGAGCTAGAACATGTCGCTCACCTGTGAGTGTCTGTCAAAACTGCGGTGAGGTGGTCCATGGGAAACAAACTAGAAATAGAGAGCCACTGACAGCTTCTGGGGCCGGCACTCGAGCAGCTGAAACGTCAAAAACAACATCGGATGCAAGCAGACTGCTACAAGGCACTCCTTTGAGGGCCCGGCCTTCTGCTGCTGCCGATCCGGCTGCTGGCGCGGCGGCCCCGGCTGCTGGTGCGGCGGCCCCGGGTGCGGCAGCTGCGTCTGCTCCGGGTGCGGCAGCTGCGTCTGCTCCGACTGCGGCAGCTGCATCTACTCCGGCTGCTGCTTCAGTCCGTAAAGACTGCTAG

Transcript

Hgig_23056

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	DUB\|OTU\|OTU

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338	OTU	OTU-like cysteine protease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR003323	Domain	OTU domain	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13312	HIV-INDUCED PROTEIN-7-LIKE PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004843	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016579	Biological Process	protein deubiquitination	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-