Gene detail

Detailed information of Hgig_20164 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_20164	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	Chromosome21	212163548	212266214	+

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_20164

ATGCCAGCATTGAACATGACATCAACGTCTAGCGTTTCATTTTCAACTCTTCCTGGAAATTCGTCGTCATCCCAATCAAGCGCATCTCGTAGGTTGAGTTCCATCCTCTCCTCAAATCCATCAGCATCCTCTAACTCTTCTTCTGCCTCTGCTTCCACCAACACAACTGTCAACCCCCTGGCAAGTTTCTTCTCTGTTGGACCATACAGGCTGCCGTCTTCTGTTGTGGCTGCTGTCCCCACAGTTACAATAACCAACAGACGTACAGGCCCCCATGCAGCTGGCAACAGAAGAACCAGCAGCAGCAGCAATGCTAGCAGTGCTACGGCAGGGGACATGGGTGGCTCCACTGATGCACTCATCGACTTGAGTGACAACAACAGCAGCAGTAGTCGCAGATCAAATGCTAATTTGAGCCTGACAAGTGGAAGTGGTGGAGGCACTAGTTCTGTGGTTGATGCTAATGCTGGTGGAGACGATACTGGTGGTGTGAGTGGAGGCAGCAGTGGTGGTGCAAGACAGTGGAACAATCTATCTTCTGTGGTTCAGTCAATATCTCCACTACTGCCGGGTTCTATGCTATTTCAAAGGGCAGCCTGGAGAGTCATGGGAAATCCAAGTTTGGGACGGACAAGTGGAAATAGAAGGTCAAACAGCTTAAGCACGTCTACTTCAGTGGACACCGGCACAACTGACAGAGATGATTTGTTGGGTTTACTTACAGCAATGGAAGAATCTCTCGATGAGAGCACTAGCAACCCGAGTACTTCAGGTGGAAGAGGTGGGGCTAACACAAGTGGGAGGAGCAATGATGCAGAAGGAGGTGGGGCTAGCACAAGTGGGACAAGGAATTCTATAGAAAGGAATGAAGCCAGCACAAGTGGGAAGACCAATGATTCAGAAAGGAGTAAATCTAGCACTAGTGGGAGGAGCAATGATTCAGAAAGGGGCGGGGCCAGTACGAGCAAGAGGAGCAACAATCTAGAAGGAGGTGGAGCTAGCACAAGTGGGAGGAGCAATGATCCTGAAAAAAGTAAGATTACTTCTGATGGTGGTTTAACAGATGACACACCTAAAGATACAATCAACAGAAATTTTAGCCTGAAAGACCAACCTTCTACAAGTCAAGAAAGTAATTTATTAAATACTTCAGTTTCCCAATCTGGCACTGGGGCAATACAGAAAGCCCAAAGTACTTCAAACTCTGGCGAAGAAACCAATATCAACAACACAACAGGAACTGGTGTTGATACCAAAGACCAATATGCAGGAATAATCTCTACTCTTTTAAGTTATTATTCAAATTCTAGTAAAAAGAGCTCCGAGGGGGATGAAGCAAGCGGAAGAGGACAGACTGAAAATAATAGTGAAAGATCAGTTGTTATTAATATTGACGCGGACGACCAAACTGAGGGAGCGGCTGATGCGAGTAACACAAGTTCTGGTAATCAAACTAACACTTTGCAAACTGGTGATGCTGGTGATGGTACAACCACTAATACCACCACTACTATTACTGCTGGTGATGGTGATAATGGTGATAGTGGTGGTACTGCTACTACTGCTGTTGCTGCTGCTGGTGGTGGTGGTGGTGGAACTGGAGAAGAAAGTACCACGGAGAATGGAGAGGATGGAGAAAACAATGAAGAGAATGAAGAAGAAAATGAAGAAAACGCTGAGGACCCCTACTGGAGCAGCGTCCTCTGGCAGTTCCCCGTCCTGGTCGGGGTCATGTGCGGCAAGTTCTTCTGGAACTACTGGATACCTGTTGTTCAGGTTTTCCTGGTGTTCTTCGTGTTCCACGTGTTCAACATCGTCGTGAAGCGCAATGTAGTGAGCAACCGGCACATGGCAATCAGCTGGCAGCAATGCTGCATCAAGATGGTCAAGAACTGGAAGAAAAAACTTACTTGGCCGAGGATAAGACGAGTCAACAGGAATAATAGTAACAGAGTAGAAGGTGCCAGCAGAACCAATACCGAAGAGGGTAGAGCTAATACAGAAGGAGGTGGAGCTAATACAGAAGGGGGTGGAGCTAATACCGAAGGGGATGGAGCTAATGCTGAAAGGGGTGGAGCTAATACCGAAGGGGCTGGAGCTAGTACCGAAGGAGGTGGAGCTAGTGCTGAAGGGGGTGGAACTGAAACACAAGCTGGTGGAGCTGATGCAGAAAGGGTTGGATCTAATATAGAAAGGGGAAGCGACGATCCCGAAGGGGGTGGAGCTACCACCGAAAGCAGCGGTGTTAATGCCAAAGAGGGCGGGTCTAACACTGGTGGGGGCGTGACTACTATTGCGAAAGGGGGTGGAGCTAATACTGTAGGCGGAGCTACAGCAACTAATACCACAGAAACTTCAGCTAATGACGAAATAACTTTAGGTATTTCCTCGAGACCTTCTGAAGGTGCCGCCACTTCAGCAGCGCCTGATTCTGTAATAAGTGTCAAGTTCATCAATATATCCAATGCTGAATGGGATGAACTTGACAACAGCGGACGAGCAAAAAAATCAAAAGAAGTTGGAGTTAAATTCCTAAAGTCTGCATTTACATCATTGAAGAGCGGTGTTAAGAAATCATTTGAATATAAGTCAGCCAGTGATGACGGTGGTGGTAGCAGTAGTAGTGGTAGTAGTCGTCATCAGGGACCATCTACCTCTAGTATATCCGTTACTAATAAGCCTAGTCTATCTGTAAATAATAGCCATGATAGTGATAGCAGCACAAACCAAAATAATAGTAGTAAAAAGAAAAGTATAAATATTAGTAGTGCTATCGGAAATATTGCTTCGACTGCTAAAGCAGCGGCAACAGAGAATTGTTTGGGAAGTAACAAGAATGACTGCGTTATAATCATTCATTCCGACAATGATGATAGTATTAATAGTGGTTATGACGATGATAAAGGTAGTAGCAAAGATAGTAGTAGGAATGTTAGTGATAAAAATGTTTCCGGTAGGGAAACGGTTACGAATTTACTTCCAAAGATTCCATCTCCGGGTGTCTGCTCTGCAGATGGTGATGAAGTAGACACTGCAAGTAGTGGCGTGAACCCTACAAATGATGTTGTAAATTCTACTGGAACCAGTACACTGAATGCCACTTCAGCTTTAGTAAATATTCCAGGGTCCACAACCAATATCGGATCCACAACCAATTCTGGATCTGTAAATAATCTCGGATCCACAACCAATTCCAAAACTGCAGTTCAGTTTCAAGAAGCTAAGATTCCAACCAATTCTGAAAATCCAGGCCAAGTTTTTCGGGAATGTTCGCCAACCAATTTGGAAGTGTCCGCCAATTCTGGGAAAAAGCCAACCGATTCCACAATTCCAAGCAGGTGTCTATCATCCAACGCTGAATCTGGAAATGCTGGAACAGATGCAAACTCAAACCCGAACTTAAATTCAAACCCAGATTCCAACGGAGATTCAAACACCACAAACGCTTCACAAGTTACTTTGATAAATCCAGATTCAAAGCCCGATTTAAACTCAGATTCCAACTCCCCAGCAAATCCTAATTCAGATACCACCTCAAATCTGAATTCCGATACCTCAAAGCAAGCAGATTCGTCCACCACAGCAAACACGTCCCCTGTTACAGCAGCAAATACAGATTCAAGCATTCCATCAGACGTTTCAAACACTACCTCAAATCCTGATTCAAATTCCCCAGCAAATCCAAATTCCCCAGCAAATCCAGATTCAAATACCTCAAATCCTGATTCAAATTCCCCAGCAAATTCAAATACCTCGAATCCAAACGCCCAAGAAAATCCTGATTCAGACTCCCCAGCAAACTCAAATTCAAACACAACTTCAAACCCTGATTCAAATATCCAAGCAAACGCACTGCAAGTTTCATCATCAAACTCTGATTCAACATCTGCAACAAACCCATTATTGCCCGATGCTGAGGATAACACACTGGACCAAGCCAACAACGGCAACAGCATCCCAAGCTTGAGCGAGGAAGAGCAAGTGGAGCAGGAGTCCGTGCAATGCTTCCAAGAGCGGGCGCAACTTCTCGTCTGTACCTGGGCACTGGTGCCAGGGTATGTTTACTTCATGTACTTCCTTGTGTGGAGTGACGAGGCTGTCTACCGGAGTTTGGGGTTCCTGACCCCCATCAACCCCCCCACCCTGCTGACGGAGGTGCTGTGGCTGTGCCTGGTGCTGGATATTTTGGTCCGCATGGGGACCGCGTGGATCAAAGCCGTCCTCTGCACCCTGCTGTTGTGCCGGCCCAATACCAGTGTGCTCAACAAGGGTAAATACTACCCACTCCTGGAGATGATCTCCCAGCTCTACCGCTCCCTTCTGCCCATCCACCCATGGTTCATCTACATATGCACCTATATCCCTCCAGAAGACAAGCACCACAACGATGCTTGGGCACCAGTGCCTCAAAACCATCACATTTTATCCTTCTCAATCCCTGAGGGCCTCAACGGGACTCTGCTGGAGGACTCGTTCTCCTCGCAACATCACCCTGAAGGAAGGGTTGGCAGTGACGAAGGAGGTGTTGCAGCCACGACTAGCAAGCATCTCATAGGGCTGCTGCTGTTCGTGGTGTACCTGCTGCATAAGAGGATTGACCTGTCCACTAGGGCTGTCAATGCTTGGCAGTCGCTTAAAGCATTGGCTACCAATACTGGGAGCTACGGCACCGTGCCTAACAAGGCTGAGGTGGAGAGCAGGGGCGGCAAGTGTCCCATATGCCACGACCAGTACAGGGCCCCCACCATGCTGCAGTGCAGCCACATATTCTGCGAGGGCTGTATCGTGCAGTGGTTCCAGCGGGAGAGGATATGCCCCATGTGCAGGGCACAGATAGCGGATGATCCCATGTGGAAGGATGGATCCACGAGCCAGCTGCCGCAGATCATATAA

Transcript

Hgig_20164

GATCTATTTTTTACAGATATATAATCATAACCTATAGGTAGGTATTCATGATTCCTATAATTATATATATTATAATTGCTCAACTTATAAGATAGGTAGCTACATAGTAACCTAGCTACCTACTTGACTTTGTACTTAGTTGCATTGTATCCAGCAATCTAGTCTACATATTTAATTGATTTTGAGATAGGCACTTATTTTATGTATTTCCTATACTATAAATATATTAAGAAATCTAAAGGAAATTTTTTTTACTTTATTATCAATAAATAAAGTAGTCAATTAATATTGATTATTTTAATCTATAATAACATGCCAGCATTGAACATGACATCAACGTCTAGCGTTTCATTTTCAACTCTTCCTGGAAATTCGTCGTCATCCCAATCAAGCGCATCTCGTAGGTTGAGTTCCATCCTCTCCTCAAATCCATCAGCATCCTCTAACTCTTCTTCTGCCTCTGCTTCCACCAACACAACTGTCAACCCCCTGGCAAGTTTCTTCTCTGTTGGACCATACAGGCTGCCGTCTTCTGTTGTGGCTGCTGTCCCCACAGTTACAATAACCAACAGACGTACAGGCCCCCATGCAGCTGGCAACAGAAGAACCAGCAGCAGCAGCAATGCTAGCAGTGCTACGGCAGGGGACATGGGTGGCTCCACTGATGCACTCATCGACTTGAGTGACAACAACAGCAGCAGTAGTCGCAGATCAAATGCTAATTTGAGCCTGACAAGTGGAAGTGGTGGAGGCACTAGTTCTGTGGTTGATGCTAATGCTGGTGGAGACGATACTGGTGGTGTGAGTGGAGGCAGCAGTGGTGGTGCAAGACAGTGGAACAATCTATCTTCTGTGGTTCAGTCAATATCTCCACTACTGCCGGGTTCTATGCTATTTCAAAGGGCAGCCTGGAGAGTCATGGGAAATCCAAGTTTGGGACGGACAAGTGGAAATAGAAGGTCAAACAGCTTAAGCACGTCTACTTCAGTGGACACCGGCACAACTGACAGAGATGATTTGTTGGGTTTACTTACAGCAATGGAAGAATCTCTCGATGAGAGCACTAGCAACCCGAGTACTTCAGGTGGAAGAGGTGGGGCTAACACAAGTGGGAGGAGCAATGATGCAGAAGGAGGTGGGGCTAGCACAAGTGGGACAAGGAATTCTATAGAAAGGAATGAAGCCAGCACAAGTGGGAAGACCAATGATTCAGAAAGGAGTAAATCTAGCACTAGTGGGAGGAGCAATGATTCAGAAAGGGGCGGGGCCAGTACGAGCAAGAGGAGCAACAATCTAGAAGGAGGTGGAGCTAGCACAAGTGGGAGGAGCAATGATCCTGAAAAAAGTAAGATTACTTCTGATGGTGGTTTAACAGATGACACACCTAAAGATACAATCAACAGAAATTTTAGCCTGAAAGACCAACCTTCTACAAGTCAAGAAAGTAATTTATTAAATACTTCAGTTTCCCAATCTGGCACTGGGGCAATACAGAAAGCCCAAAGTACTTCAAACTCTGGCGAAGAAACCAATATCAACAACACAACAGGAACTGGTGTTGATACCAAAGACCAATATGCAGGAATAATCTCTACTCTTTTAAGTTATTATTCAAATTCTAGTAAAAAGAGCTCCGAGGGGGATGAAGCAAGCGGAAGAGGACAGACTGAAAATAATAGTGAAAGATCAGTTGTTATTAATATTGACGCGGACGACCAAACTGAGGGAGCGGCTGATGCGAGTAACACAAGTTCTGGTAATCAAACTAACACTTTGCAAACTGGTGATGCTGGTGATGGTACAACCACTAATACCACCACTACTATTACTGCTGGTGATGGTGATAATGGTGATAGTGGTGGTACTGCTACTACTGCTGTTGCTGCTGCTGGTGGTGGTGGTGGTGGAACTGGAGAAGAAAGTACCACGGAGAATGGAGAGGATGGAGAAAACAATGAAGAGAATGAAGAAGAAAATGAAGAAAACGCTGAGGACCCCTACTGGAGCAGCGTCCTCTGGCAGTTCCCCGTCCTGGTCGGGGTCATGTGCGGCAAGTTCTTCTGGAACTACTGGATACCTGTTGTTCAGGTTTTCCTGGTGTTCTTCGTGTTCCACGTGTTCAACATCGTCGTGAAGCGCAATGTAGTGAGCAACCGGCACATGGCAATCAGCTGGCAGCAATGCTGCATCAAGATGGTCAAGAACTGGAAGAAAAAACTTACTTGGCCGAGGATAAGACGAGTCAACAGGAATAATAGTAACAGAGTAGAAGGTGCCAGCAGAACCAATACCGAAGAGGGTAGAGCTAATACAGAAGGAGGTGGAGCTAATACAGAAGGGGGTGGAGCTAATACCGAAGGGGATGGAGCTAATGCTGAAAGGGGTGGAGCTAATACCGAAGGGGCTGGAGCTAGTACCGAAGGAGGTGGAGCTAGTGCTGAAGGGGGTGGAACTGAAACACAAGCTGGTGGAGCTGATGCAGAAAGGGTTGGATCTAATATAGAAAGGGGAAGCGACGATCCCGAAGGGGGTGGAGCTACCACCGAAAGCAGCGGTGTTAATGCCAAAGAGGGCGGGTCTAACACTGGTGGGGGCGTGACTACTATTGCGAAAGGGGGTGGAGCTAATACTGTAGGCGGAGCTACAGCAACTAATACCACAGAAACTTCAGCTAATGACGAAATAACTTTAGGTATTTCCTCGAGACCTTCTGAAGGTGCCGCCACTTCAGCAGCGCCTGATTCTGTAATAAGTGTCAAGTTCATCAATATATCCAATGCTGAATGGGATGAACTTGACAACAGCGGACGAGCAAAAAAATCAAAAGAAGTTGGAGTTAAATTCCTAAAGTCTGCATTTACATCATTGAAGAGCGGTGTTAAGAAATCATTTGAATATAAGTCAGCCAGTGATGACGGTGGTGGTAGCAGTAGTAGTGGTAGTAGTCGTCATCAGGGACCATCTACCTCTAGTATATCCGTTACTAATAAGCCTAGTCTATCTGTAAATAATAGCCATGATAGTGATAGCAGCACAAACCAAAATAATAGTAGTAAAAAGAAAAGTATAAATATTAGTAGTGCTATCGGAAATATTGCTTCGACTGCTAAAGCAGCGGCAACAGAGAATTGTTTGGGAAGTAACAAGAATGACTGCGTTATAATCATTCATTCCGACAATGATGATAGTATTAATAGTGGTTATGACGATGATAAAGGTAGTAGCAAAGATAGTAGTAGGAATGTTAGTGATAAAAATGTTTCCGGTAGGGAAACGGTTACGAATTTACTTCCAAAGATTCCATCTCCGGGTGTCTGCTCTGCAGATGGTGATGAAGTAGACACTGCAAGTAGTGGCGTGAACCCTACAAATGATGTTGTAAATTCTACTGGAACCAGTACACTGAATGCCACTTCAGCTTTAGTAAATATTCCAGGGTCCACAACCAATATCGGATCCACAACCAATTCTGGATCTGTAAATAATCTCGGATCCACAACCAATTCCAAAACTGCAGTTCAGTTTCAAGAAGCTAAGATTCCAACCAATTCTGAAAATCCAGGCCAAGTTTTTCGGGAATGTTCGCCAACCAATTTGGAAGTGTCCGCCAATTCTGGGAAAAAGCCAACCGATTCCACAATTCCAAGCAGGTGTCTATCATCCAACGCTGAATCTGGAAATGCTGGAACAGATGCAAACTCAAACCCGAACTTAAATTCAAACCCAGATTCCAACGGAGATTCAAACACCACAAACGCTTCACAAGTTACTTTGATAAATCCAGATTCAAAGCCCGATTTAAACTCAGATTCCAACTCCCCAGCAAATCCTAATTCAGATACCACCTCAAATCTGAATTCCGATACCTCAAAGCAAGCAGATTCGTCCACCACAGCAAACACGTCCCCTGTTACAGCAGCAAATACAGATTCAAGCATTCCATCAGACGTTTCAAACACTACCTCAAATCCTGATTCAAATTCCCCAGCAAATCCAAATTCCCCAGCAAATCCAGATTCAAATACCTCAAATCCTGATTCAAATTCCCCAGCAAATTCAAATACCTCGAATCCAAACGCCCAAGAAAATCCTGATTCAGACTCCCCAGCAAACTCAAATTCAAACACAACTTCAAACCCTGATTCAAATATCCAAGCAAACGCACTGCAAGTTTCATCATCAAACTCTGATTCAACATCTGCAACAAACCCATTATTGCCCGATGCTGAGGATAACACACTGGACCAAGCCAACAACGGCAACAGCATCCCAAGCTTGAGCGAGGAAGAGCAAGTGGAGCAGGAGTCCGTGCAATGCTTCCAAGAGCGGGCGCAACTTCTCGTCTGTACCTGGGCACTGGTGCCAGGGTATGTTTACTTCATGTACTTCCTTGTGTGGAGTGACGAGGCTGTCTACCGGAGTTTGGGGTTCCTGACCCCCATCAACCCCCCCACCCTGCTGACGGAGGTGCTGTGGCTGTGCCTGGTGCTGGATATTTTGGTCCGCATGGGGACCGCGTGGATCAAAGCCGTCCTCTGCACCCTGCTGTTGTGCCGGCCCAATACCAGTGTGCTCAACAAGGGTAAATACTACCCACTCCTGGAGATGATCTCCCAGCTCTACCGCTCCCTTCTGCCCATCCACCCATGGTTCATCTACATATGCACCTATATCCCTCCAGAAGACAAGCACCACAACGATGCTTGGGCACCAGTGCCTCAAAACCATCACATTTTATCCTTCTCAATCCCTGAGGGCCTCAACGGGACTCTGCTGGAGGACTCGTTCTCCTCGCAACATCACCCTGAAGGAAGGGTTGGCAGTGACGAAGGAGGTGTTGCAGCCACGACTAGCAAGCATCTCATAGGGCTGCTGCTGTTCGTGGTGTACCTGCTGCATAAGAGGATTGACCTGTCCACTAGGGCTGTCAATGCTTGGCAGTCGCTTAAAGCATTGGCTACCAATACTGGGAGCTACGGCACCGTGCCTAACAAGGCTGAGGTGGAGAGCAGGGGCGGCAAGTGTCCCATATGCCACGACCAGTACAGGGCCCCCACCATGCTGCAGTGCAGCCACATATTCTGCGAGGGCTGTATCGTGCAGTGGTTCCAGCGGGAGAGGATATGCCCCATGTGCAGGGCACAGATAGCGGATGATCCCATGTGGAAGGATGGATCCACGAGCCAGCTGCCGCAGATCATATAAGGGAACACAGGATACTGTGCAGAAGGATCAGCCAGCAGCCACAGATCATATACGGGAACATAGGATACTGTGCAGAAGGATCAGTCAGCAGCCGCAGATCAT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13639	zf-RING_2	Ring finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR002321	Family	Cytochrome c, class II	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR044235	Family	E3 ubiquitin-protein ligase 1/2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:1904294	Biological Process	positive regulation of ERAD pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-