| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Hgig_08568 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 | Chromosome8 | 294145915 | 294761545 | + |
| CDS | |||||
| Hgig_08568 | |||||
| Transcript |
| Hgig_08568 |
| Protein |
| Hgig_08568 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF09732 | CactinC_cactus | Cactus-binding C-terminus of cactin protein | Domain | Interproscan |
| PF10312 | Cactin_mid | Conserved mid region of cactin | Family | Interproscan |
| PF14570 | zf-RING_4 | RING/Ubox like zinc-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003954 | Domain | RNA recognition motif domain, eukaryote | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR018816 | Domain | Splicing factor cactin, central domain | Interproscan |
| IPR019134 | Domain | Splicing factor Cactin, C-terminal | Interproscan |
| IPR034261 | Domain | CNOT4, RNA recognition motif | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR039515 | Domain | NOT4, modified RING finger, HC subclass (C4C4-type) | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21737 | POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0045292 | Biological Process | mRNA cis splicing, via spliceosome | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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