Gene detail

Detailed information of Hgig_06998 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_06998	TRICHOHYALIN-RELATED	Chromosome7	31445934	31800195	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_06998

TTGTCTAGGCAGCCAAAAAGACGGTCCAGTCAGAGATATAAACGTAACCGGATTGTGAAAGTTAACGAGTGTGAATGTGATGGTGGACAGAACGCCATATCGGCCAATGAATCAAAGAAAAGCCATTGCAAGGAACTTGTCCCTGTAAGAAAGCAACATTCGGTAAGGAGTCGTTTCCACTCCAAAAGAAAGGTTTTAATGAAAAAACGAACAGTGAAGCGAAGTAAATTACTCAGAGAAAGTGTTCCTCATAAAAAAGAGCAACTGAAAAAGAAAAACCAACCTCAAGATCAAGAGATGCAGTTCTCCGATGATTCTGATGAAGAATTTACTGGCTTTGGAATGGATGTTGGTTCAGGTAACTCTTCTCGAGATTTTACTGGTTTTGATGATGATGATGCTGTAAACAAGCATGCTCTAATTATGAGCCCTGAGAGGCTAGCACAGGCAAAGACTAACCTCATGATGAGAGATTTGCTCTCAAGGCAGGCAAGACGCGAAAATAAAGACAATTCTGGTGCAAAGTTCAGCTCACAGGATGCTACATCTTCATCTAACACATCGGAGTCGACCACAACTTCTACTGTATTTGGTGAAGCTAAAGTGAAAGTGGAAAAGCTTGATGACGAAGATTCGATGGATATCAACATGATGGATGCTGGAGCTGAAAGGGTTGCTGGGTCTTCAGATGGTGATGAGACTGATATATCTGACTACTCGAGTAAGTCTACCAGACTAAGAGTAGAGGATGTCTTCACTGACTCGGAGAATGAGCATGCAAACTCAATGTTGCATGCAGTTCTCAAGAAAAACATGGCAAAACAACAGACTAATGCAGAGCGCAAACCATCTCGTAAGAAGAAGATTCGAACTGCGCCAAGGATCGACATGGACAAAGTGACCATTGCTTTTGAGAAAGGCTGGCGCAGGGAGGTAGTGTACCGTGCAACTGTGGCCGACAAGCCAGATAAGAAGAGCGGTGCTGGTGGTGGCTGCAATGCTGATGTCTACTACTACACTCCCAACAACAAGAAACTGCGCTCACTCGTTGAGATAGAGAAGTATTTGAAGGAGAACAACATTACTGATCTTACAGCTGAGAACTTTACGTGTGCTCGGTACCCTATTGGTGCTGACCCCTCTGTTGAGATGGTGCGACACGCCAAGATGAATATTGTGAAGCGCAAGTTGGACCAGGTCCAGAGCAGCGAGGAATGTGGCGGTGAAGCCCTGCCGCACAAGAGGAGAAAGCCTGCTGCCTCGAGTCCCAGGCAATCCAAGCTAAGAAATGTGCAGTCTGACGCTACTGTCAGCCCTCATGCTAGTAAAAAGACACGTGAAGACCACACCACTACGGCTGCTGTTGCTGCCGCTGCCGCCGCCGCCGCCGGTCTTGGAAGTAGTAGCTCTGAGGACTGGTTTATGTCCAAGGATTGCCAGGTCACAATGCGACGGGTGAACACGGGCGTGACCAGGCCTCAGTTTCCACTCTACGATGCTGGATCAGATGCTGCAAACTCTTGGAACCAGTCCCTGTGTCGTATTGGCCGCCCACTGCGCCTAGGCACCACGCCGTCCTCCCACGTGGTGGAGCCCCCGTCACAACCCTGGGGCATGGACCTGCCCCGCCTCATGACCAATGCCAGGGTCATCACACCCCTCGTGAAGGGGTCTGAAGCAAAGAAGACCTACCATTGCACAGCAATGTGCGCTGGCGTGCACGAGGCACTGCCTAGTCTGCCGTGCTTGCAGTGCCGCTGTTTGTTCCACCCTCAGTGCATACACCTGCCCTACTCCCTCACAGCTCTCATCGTCAACCAGACATACAGGCTCATGTGTCCGAATTGTTACCTGTACACAAAGAATCACACCACGGAGAGCAGGATTCCCCACAACCCCATCATGCCTCACGAGCCACTAAGCTATGACGACGACCCCAGCACTCCTTACAGCGACTACTCTGACGCCGACGAGGGCGTTGGCTCTGACATTGAGAACGTTGATCCGACTAATGCAAGCAGCAATCAGTTGCCTCTTCTGAACATTGATCTGAGGCCACCAACCCCCACGACACCAGACTACACTCTCGAGACGTACTTTCCTCCTGTCGGGACTACAGAACAGGAGCAAAGGAACATGGCTCTGCAGGCATTGCAGAACCTCGGTGGGAGTGACTCCTCCGAGAGAAGCCCCACCCCCTGTGAAGACTCAGGTCCCATCCGAAGACCGCTTAGGAGGACCCTGAGTGCTGATAAATTAGGTATCCCAACTCGTATTCTTTTGAGTGCTTTGACTTATAGTGGTGTTTATAACAGCAAGACTTTCGAAGGAAGATCCACTTCTGAACACAGTAGCATACAAAATCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAACAGCTACTGCAGCGACAAATGCAACATTTACAACAACAGCTACAGCAACAACAACGACATAGTTTTTTGCAACCAGCAATGTCTTCTTATCAGATGTTGGAGAAGTTGAAGCAGCTTCCTCAGGCTCGAGTGGGGGTAGGCTTCCACCCCGCCGCTGGTTTTAGGGACTACGGTCGCGATGTCTCCCAGGGTTACAACATTATGAGACGCGTGTTCGGGTACCTGAGCCCCGTGGAGCTGCTTGCTGCCTCTAACGTGTGTGTCATGTGGCGGGATCTCTCCTACACTCCGCAAATGTGGTCTAGTGTGGTGCTGTGCCACAGCAGCTGCCGCATCGCCGACTGGAACAGCATGGCGCTATTCCTTGACACTCGCAGGACTAAGCGACTTCACCTCACGTCACAAATCATGGAACCAAAAAACGAACAAGTGGTTGAAAGGTGGAGTTTCGGTGACGAAGACAAGTCACTTTGTCAAGTCAAGCCTCTGCCAGCACCGACATCAAATATCACATCACGCCCAACCCCTTCAACAACTCCGTCTTCGAACACAACTTCAGATATTGATATCATGACTGTATCCAGGGATGTTGAAGACGATGACGCAACTCCTAGGCAAAAAACTGCTGAAGGAAACGATGAAAACATGGAAATAGATGCCGAATATCGTGATAATTTCGCCAATAATCGTGATTCCGTTACCAATACTAATAATGCTGTGCATGATGATAGCTTCGAGAGGAACGAGAGACGTAAACTGGATACAGTATTGAAGGATTTGGAATCACCTTCGAAGGACGATTCGTCTTCTTCGTATGACGACCTCGATATAACTGATGACGCTGAAAATAGCAACGATGATATCGGTGAATCATTCTCAATTGTTAATGAAGAATTTGACGAAACCAAATCGAACATTGCCAATGTTCCAATTAAAAGTGAAGAAATCGAGTCTGCAAGTAAAAAATCTGCAATTGGCGATGAAAAGTGGGAATCTGTTGAAAAAAAGATGGAATCTGTTCAAAAAATGATGGAATCTGTTCAAAAAAAGTCTGAATTTGATGAACAAAAGTATGAATCTGTTGAAGAAAAGATGAAATGTGTTAAAGAAAAGACTGAATCCGCTGAAGAAAAGACTGAATCCGCTGAAGAAAAGACTGAATCCGCTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAAAAGACGGAATCTGTCGAAGAAAAGATGGAATCTGTCGAAGAAAAGATGGAATCTGTTGAAGAAAAGACGAAATCTGTTGAAGAAAAGATGGAATCTGTTGAAGAAAAGACGGAATCTGTTGAAGAAAAGACGGAATCTGTTGAAGAAAAGATGGAATCTGTTGAAGAAAAGACGAAATCTGTTGAAGAAAAGACGAAATCTGTTGAAGAACAGATGGAATCTGTTGAAGGAAAGACTGAATCTGTTGAAGGAAAGACTGAATATGTTGAAGAAAAGATGGAATATGTTGAAGAAAAGATGGAATATGTTGAAGAAAAGATTGAATATGTTGAAGAAAAGATTGAATCTGTTGAAGAAAAGATGGAATCTGTGGAAGAAAAGGTGGAATCTGTTGAAGAAAAGACGGAATCTGTTGAAGAAAAGACGGAATCTGTTGAAGAAAAGACGGAATCTGTTGAAGAAAATACGGAATCTGTTGAAGAAAATACGGAATCTGTTGAAGAAAAGATGAAATCTGTTAAAGAAAAGACGGAATCTGTTGGAGAAAAGACTGAATCTGTTGAAGAAAAGACTGAATCTGTTGAAGAGAAAAGACGAAATCCGTTCAAAAAAAGATGGAATCTGTTGAAGAAAAGGAAGAAGAACGTGAATCTAGAGATGAAAAGACGAAGTCTAGAGAGGAAAAAACGGAATCTAGAGAGGAAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTATAGAAGAGGAAAAGACGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAATACTGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGACGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGACGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAATACTAAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAATACTGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATGGAATCTAGAGAGGAAAAGATTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAAGACTGAATCTAGAGAGGAAAATAATGAATCCGACGTATGTGAATCTGATGAACCGAAACTAGACTTAACTGTGGAAAAATCGAAAGTTACCGAAGAGTCTTCCGAATCCGTTGAAGTTCACCCGAACAGTTTGGATATCAACTCTGAATTGAAGCACAAGCAAAAACTCCCTGCAGATATATCTCATAATGCAGTTGCAGCTGGCACGCAGGCTGATTCAGATGACACAGTGTGGGAGAAGACGAGTTCTCCAAATCCGTCTGCTGGTCAAGCTTTCCAAGAAATGTCGAACAAAATGGAAACGGACGAGACCGTTTTCAATAATAAAGACACAACACCTGTTCCTAATATATCTGTCTTTGAAGCTGCACAGAAGGAAGTGTCTAGTGAAACAGAAATAAGCAATGAAGAAGAAGAAGTGGATATGACCATGAGCAAAGGAGTGGATATTGATAGAGACGGTGGAATGGAGAGTAAGATGAAGCATAGAGTGACTGAAGGAGAGAAAGTCGGTGGTGTCCTGAAGAAGATGTGCGAAGTACCCCTGCAAAGAGTGGTTATAGATAGAGATGGTGGTATGAAAAGCGAGATGAAACACAGTGAGGAAGATGTGGAAAGCGAAGTATGGGGGACTAGTGCTGCCGAAAGGAGACGAATGCAAGGTGAGATGTGGAGGAGCGTGAGCAAGGCACTGGGTAGCATGCGATGCCTGCAGCAGCTGGTGTTAAGTGGCTGCGAGGAGGGATTGTTGGACCAACTGCTGCCACACTGCCGTAACCTCACCGCACTGCACATAACTGCACTGGGGGACCAGGCCACTGGCACGCTTCTTAGGTTCGATCCCAGTTACCTCCTTCAAGCCAGCAACCTGGAGGACCTACAACTGTCTGGCCACTTTACCTTCACTGCCAACTTCAACTTCATCAAACTGCGCAAGCTCAATAAACTAGGTTTGTGTGGGGCAGAACTGCCGCGCTGGCCGTACCTGGGCACCAGCATCACGCACCTCTATCTGAGTCCCATCACACGCTTCACCAGCGACACATGGATCAACATTGCTGCCATGAAAGGTTTAGAGGAGCTGAGCTTGGAGCATTTCCCTGTGAACACCAGCGACAGCAGTTGGCACCCAGCTCTCGCTCAGCTCACGATGCTCAGGAAACTGGCCCTCATTGACTGCTCTCTCGGCCCCAGGATAACGTTCCTGCTCAAAAAGCTCACCAGACTGCGCACTGTCGTTCTTAATCCTCAGCTGCCCAGACCCGATGCATCACTTAGTGATCAGCTTGGTCGTGTGCGTCAGTTGTCCCTGATGCTGAGTGCTTGTGCTGTGTCACTTGTGTGTGACCGCTCTCACATCACCCTCGCCGTGCTGTCTGATGCAGCTTCTGCAGCGCCGTGTGAGGGCCTCACTGTTTCTACTAATTTCAGCAATAATCGGGGCAACCTCGGAAAGGACGGCAAGTGCCAGGAGACGCAGCTGACTCACGTGCCTCTGCAGGACGTACCTCGTTACTTCACCAGACGCGGCGGCACAACACAACGATCTTTGTTCTCCTTCAGGATACTCCAACCAGGGCAGGACCTCCTCTTCCCACGAGACTTCACG

Transcript

Hgig_06998

Protein

Hgig_06998

LSRQPKRRSSQRYKRNRIVKVNECECDGGQNAISANESKKSHCKELVPVRKQHSVRSRFHSKRKVLMKKRTVKRSKLLRESVPHKKEQLKKKNQPQDQEMQFSDDSDEEFTGFGMDVGSGNSSRDFTGFDDDDAVNKHALIMSPERLAQAKTNLMMRDLLSRQARRENKDNSGAKFSSQDATSSSNTSESTTTSTVFGEAKVKVEKLDDEDSMDINMMDAGAERVAGSSDGDETDISDYSSKSTRLRVEDVFTDSENEHANSMLHAVLKKNMAKQQTNAERKPSRKKKIRTAPRIDMDKVTIAFEKGWRREVVYRATVADKPDKKSGAGGGCNADVYYYTPNNKKLRSLVEIEKYLKENNITDLTAENFTCARYPIGADPSVEMVRHAKMNIVKRKLDQVQSSEECGGEALPHKRRKPAASSPRQSKLRNVQSDATVSPHASKKTREDHTTTAAVAAAAAAAAGLGSSSSEDWFMSKDCQVTMRRVNTGVTRPQFPLYDAGSDAANSWNQSLCRIGRPLRLGTTPSSHVVEPPSQPWGMDLPRLMTNARVITPLVKGSEAKKTYHCTAMCAGVHEALPSLPCLQCRCLFHPQCIHLPYSLTALIVNQTYRLMCPNCYLYTKNHTTESRIPHNPIMPHEPLSYDDDPSTPYSDYSDADEGVGSDIENVDPTNASSNQLPLLNIDLRPPTPTTPDYTLETYFPPVGTTEQEQRNMALQALQNLGGSDSSERSPTPCEDSGPIRRPLRRTLSADKLGIPTRILLSALTYSGVYNSKTFEGRSTSEHSSIQNQKQQQQQQQQQQQQQQLLQRQMQHLQQQLQQQQRHSFLQPAMSSYQMLEKLKQLPQARVGVGFHPAAGFRDYGRDVSQGYNIMRRVFGYLSPVELLAASNVCVMWRDLSYTPQMWSSVVLCHSSCRIADWNSMALFLDTRRTKRLHLTSQIMEPKNEQVVERWSFGDEDKSLCQVKPLPAPTSNITSRPTPSTTPSSNTTSDIDIMTVSRDVEDDDATPRQKTAEGNDENMEIDAEYRDNFANNRDSVTNTNNAVHDDSFERNERRKLDTVLKDLESPSKDDSSSSYDDLDITDDAENSNDDIGESFSIVNEEFDETKSNIANVPIKSEEIESASKKSAIGDEKWESVEKKMESVQKMMESVQKKSEFDEQKYESVEEKMKCVKEKTESAEEKTESAEEKTESAEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKTESVEEKMESVEEKMESVEEKTKSVEEKMESVEEKTESVEEKTESVEEKMESVEEKTKSVEEKTKSVEEQMESVEGKTESVEGKTEYVEEKMEYVEEKMEYVEEKIEYVEEKIESVEEKMESVEEKVESVEEKTESVEEKTESVEEKTESVEENTESVEENTESVEEKMKSVKEKTESVGEKTESVEEKTESVEEKRRNPFKKRWNLLKKRKKNVNLEMKRRSLERKKRNLERKKMESREEKMESREEKMESREEKMESIEEEKTESREEKMESREENTESREEKMESREEKMESREEKTESREEKMESREEKTESREEKMESREEKMESREEKMESREENTKSREEKMESREENTESREEKMESREEKMESREEKIESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREEKTESREENNESDVCESDEPKLDLTVEKSKVTEESSESVEVHPNSLDINSELKHKQKLPADISHNAVAAGTQADSDDTVWEKTSSPNPSAGQAFQEMSNKMETDETVFNNKDTTPVPNISVFEAAQKEVSSETEISNEEEEVDMTMSKGVDIDRDGGMESKMKHRVTEGEKVGGVLKKMCEVPLQRVVIDRDGGMKSEMKHSEEDVESEVWGTSAAERRRMQGEMWRSVSKALGSMRCLQQLVLSGCEEGLLDQLLPHCRNLTALHITALGDQATGTLLRFDPSYLLQASNLEDLQLSGHFTFTANFNFIKLRKLNKLGLCGAELPRWPYLGTSITHLYLSPITRFTSDTWINIAAMKGLEELSLEHFPVNTSDSSWHPALAQLTMLRKLALIDCSLGPRITFLLKKLTRLRTVVLNPQLPRPDASLSDQLGRVRQLSLMLSACAVSLVCDRSHITLAVLSDAASAAPCEGLTVSTNFSNNRGNLGKDGKCQETQLTHVPLQDVPRYFTRRGGTTQRSLFSFRILQPGQDLLFPRDFT

Gene family

Gene family	Subfamily
Transcription Factors Family	MBD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00261	Tropomyosin	Tropomyosin	Coiled-coil	Interproscan
PF01429	MBD	Methyl-CpG binding domain	Domain	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000533	Family	Tropomyosin	Interproscan
IPR001739	Domain	Methyl-CpG DNA binding	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR004089	Domain	Methyl-accepting chemotaxis protein (MCP) signalling domain	Interproscan
IPR016177	Homologous_superfamily	DNA-binding domain superfamily	Interproscan
IPR026737	Family	Golgin subfamily A member 6-like	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23143	TRICHOHYALIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-