Detailed information of Hgig_04770 in Hirondellea gigas Gene info
Gene IDAnnotationChromosomeStartEndStrand
Hgig_04770U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOGChromosome4330832842330980701+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF10269Tmemb_185ATransmembrane Fragile-X-F protein FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019396FamilyTransmembrane Fragile-X-F-associated proteinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44163U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034455Cellular Componentt-UTP complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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