| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| HS22208 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | hadal_26 | 280011 | 294452 | + |
| CDS | |||||
| HS22208 | |||||
| Transcript |
| HS22208 |
| Protein |
| HS22208 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00058 | Ldl_recept_b | Low-density lipoprotein receptor repeat class B | Repeat | Interproscan |
| PF00086 | Thyroglobulin_1 | Thyroglobulin type-1 repeat | Domain | Interproscan |
| PF06119 | NIDO | Nidogen-like | Family | Interproscan |
| PF07474 | G2F | G2F domain | Domain | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF12947 | EGF_3 | EGF domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000033 | Repeat | LDLR class B repeat | Interproscan |
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000716 | Domain | Thyroglobulin type-1 | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR003886 | Domain | NIDO domain | Interproscan |
| IPR006605 | Domain | G2 nidogen/fibulin G2F | Interproscan |
| IPR009017 | Homologous_superfamily | Green fluorescent protein | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR024731 | Domain | EGF domain | Interproscan |
| IPR036857 | Homologous_superfamily | Thyroglobulin type-1 superfamily | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| IPR050778 | Family | Cueball/EGF/LRP/Nidogen | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46513 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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