Gene detail

Detailed information of HS21955 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS21955	REGULATOR OF G-PROTEIN SIGNALING LOCO	chr24	25721545	25727195	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS21955

ATGGTGCAGCCTTTTCTTTTGTTTACCCCCATCGTCTCCAGAGTTGACCCAAATGGCCCTTGGTTACCAAACTATGGAAACTGGAAGCAGCCTCGCCGCGTCGGACGCAGACACGTAAGTCGCGTTTCAATCCTCCTCgaagagagggaacattaggagagaagagagggaacattaggagagaagCCGCATCCACCttcttttttctttctttcttttctttACCCCGaTTCAACCACTCAGACGTAAACTGCCCAGCTGTTGCCGTTCGCCTTCTCGTCGATGACAACATTTATACAATAAGGCGTCGGATAATTAaAACAGCGGAGCGTCGAGACGCCCGAGCTCGCGCAGCCGCAGTTTGACACCTGTGGAATGAGCTGCTGTTGATACtTATATTCGTGATTTCTCAAACTAACTTTTTTTTTTTGGGGGGTTCAATTTATCCCACATAACTGTTCGCGGTCTGACTGACAGCTCGGTTAAACCAATCACAGCGGAGGACAAGTCTGTGTACACCGTCGTTGCCATAGTTACAGACCGACATTCCAAAAAAAACTAGACGTCCGGGCGGGGGGCGGGACTCCGGGTTAAGCACGGtTGGGTGCACTCCGAACAGCGAGTCGGGGCAAGAAACTTTTTTTGTGTGTGTAACTTTCGTGAATTGTCAAGAGACAAAAAGCATGCACACGGTTGAATGTAGAGCGACGCTATAAAGTTTGTAACGTCTCTCAAAAGGAGAGTTTCGTGAAGTAGCGCTAACGGGTCGCTCTACTAGCATGTCGAGCTAACGAAGCTAACAGCAACAGCTCGCTAACCTCCGCTCACGTTAACTTATTCCTCACAATTTATTAGCTCATAATTCACTCATAATTTAACTCGGACGGAAGCCAAAGTTTACAGTTTATAACACGCGAAGCTAAAAGTTGCCCCAAAGTGAGTTAGCGGTTGGGTCTGTCTCGTTTCACCTGCCTGTCTGGCAGGTACAACAACGCCTCTTTAAAAAGCGCTCTTCCCATTGGACAGCGCGTCGCTGACTCCGCCCTGCACAGGTGTGGCTGTGTGGAGCTCAACGTGCAGGTGTACGCTGCATATGTACTATTGACATTGCCATTATTGCCATTATCATGATCTCCTTTGACATTTAGAAACTTGAATGGAGCCCTTTATTCTtCCATAAAGACGAGACGGCatgtttaatATGCGaATATAATGCGTGTGAAAAAGAAAGAAAGTATGACAGGTCATAGATCATGACTGCCTTCTGTTGTGCTGCAGGTAACTGAGCCTGTGACTTGgagagcgagagagagagagagagtgaCACCAGGATGCGACGACTACAGTAGCAACGCTGTGCCAGAAGTGAGGAGAATCTTTCACCCCTCTGCTGCATTTGGACCCGCTGCTCATCTTTTGGTCGCAGTTTGACAAGAAGACAAACCTCTCCTGCAGCAGAGCCCAGatatatataatatatatatatatataATGACGAATTGAAAACTCGCTGAATCAATGGACAAGAGGAAGTACCCCGGCACGATGTCCAGGCAAGTGGATGCGTCATCCAAAAGACGCCCTTACGGtGGAGGCGGGTTGCCTCAGCCGCCGCcctcctcctcctcctcctcctcctccCTCCGGCAGGGTCGCGTCCGCGCCGTGGAGGTGGCGAGAGGACGGTCGGGGTACGGCTTCACGCTGGCGGGCCAAGGGCCGTGCGTCCTCAGCTGCGTCcTCAAAGGCAGCCCCGCCGACCACGTGGGCCTGCGCTCGGGCGACCGCGTCCTCTCCGTCAACGACGCCGACGTCTCCGAGGCGTCGCACGAAGACGTGGTCAAGCTGATCGGGCGCTGCTCCGGCGTCCTGAAGCTGGTCGTCGCCGAAGTGGAACGTCACAGGCGGcaacatcaacaacaacaacaacaacaacGCGCCGCCCCGAGTCGTCACCAGAGCAGCAGCAGCGCGATGGCGGCtTCCTGGCCGGACTCGTGCTCGAGCGACGACGAGTTGGACGCTTTCTACGACGACGGCGCGaACAACAACGGCGGCGGCAGGTCGGGCTGCGGGGCCCGCGGCGGGTGGTACAAACCCAAACTGGATTCTAAGCAGCTGGGCATCAACCGGGCGGAGAAGGTCGTGGCGGAGCTGCAGTCCGGAGGGATTTTCAACATGATCTTCGAGAACTCCAGCCAGTCCTCCAGCAGCTCGGACAAGGACCGGCCCGGAcCCGGCGGCTCGAAGGCGCCGCGGCCGCtCTCCGAGCCGGAGTTCCCCCTGTATCGGAACGCCTCCGGATCCCGGAGCGACCCCAACCTGCTCTCCGAGGAGGAGATGGCCCGAGTTCTGAGCGACGACTCGGTCTTCCTGGAGGCGGACTTCCGCCACCTCCACCTgCAGCACGAaGAAGAGCCGGACCTGGACGACGTGGGAGACTTGGGCCTGGAGCCCGGCGAaGGCATCCTCAACGCGGGCATGGTCGTCGGCTACCTGGGCTCCATCGAGCTGGCGTCCATCGGGGCGAGCTTGGAGAGCGACAGCCTGCAGGCCATCAGGTGCAGCATGAGGCGCCTCCGGGCCGAGCAGAAGGTCCACTCGCTGGTTCtgatgaaggtgagatctgatgatgatgatgaggatgaCTTGTTTACTATTTTATTTGCTTTGTCCGTTTTGAATTtgtgattcttctcctgccttgttagtacttgactttctacgaggataatcactattctccttattaattgtttTTGCACCCATTTGGAAAGCGTAAAATATTATATAAACATTGgAgATGTAATCTTTTATTTTTAGGGTTTGTTTTGtgaaaaatagcctcttggctaataactctggcacatttacagaaatgtttttattaatgtgcactgactgtcctttatcaactaaaccaaagaaatatatTTTAAAAAATTTGTAAAAAGCTTTTTACCAAAAATTGAAACAGAAAAATTTACAAGAAGCATTAaAAAAAgTAATCAGCGATAAAAAATATAtGACATATTTGTTTTCTTTCTTTTGGTGAACTGCATTAAGACAAGAAATAATAATAGGAAAAAAAGTTAAAATTAATAAATGAGTTATGAATGAACCCCGAAAGTTAAAAACACTAAAATAAAAAATATACAGTCGAGTAACGAAGGAGCTTAAAAAGAATGAACATTATAAAtTGTTCCCCATTAACAGTTTGAGTGATGGAAAACCTGAAAAATAAATGACATGATTAGCGAAGTCATTTTGAATGATGCCTGGTATCTGTGATTATCTGTCTGCTCCCTGGTATAAAACGTGAATCCGTGTGAACCACGTCCTGCCAGGTGATGCACGACAGCGTGCGTCTCTGCAGTGACAGAGGTCAGGTTCTGGCCACCTACCCTGCAGAGAAACTGGCCTTCAGCGCCTGTTGCCCCGACGACCGTCGGTTCTTCGGCCTGGTGACGATGCAGGCGACCGACGACCACGACGACTGTCACTTCAGCAACGGGCGAGACGAAGAGGGCGGTTTGAGGACTTCCTGTCACGTGTTCATCGTGGACCCCGATCTCTGTCACCACCAGGTACATAATATAGGGAATTTATTTGTGATTTTACGGTGCTCTGTGGGAGGGGGAAGAAAAATCACAGAAAAAAACATTTGATTTTGTTTTTGTTTTGGCAATGGATGCATGAACAAAAGAAGTTATAAGAAAAAGTCTGTATTTAGTATATATTTTTTTTAATGCCGACTGGTGTAAACCTCTCGAGATATTTTAAAAGACTCTTTAACTGTTGGTAGTTTTTGGTGTCAATTCAACACGGTAGTTTTGGCATTCACACCAAAGTAGTACTCTTTTTAAAAatgtattatatatacaaattgtattttttaattccactataaaaaggtatatatatataaatatacaaattgtattttttattccactataaaaaggtatatatatatatataaatatacaaattgtattttttaattccactataaaaaggtatatatatatataaatatacaaattgtatttttttattccactataaaaaggtttatatatataaatatacaaattgtatttttttattccactataaaaaggtgtgtgtgtgtgtgtatatatatacaggactgtctcagaaaattagaatattgtgataaagttctttattttctgtaatgcaattaaaaaaacaaaaatgtcatgcattctggattcattacaaatcaactgaaatattgcaagccttttattcttttaatattgctgattatggcttacagcttaagaaaactctaaaatcctatctcataaaattttaatatttcctcagaccaagtaaaaaaaaagatttataacagctgagtgtttgtcaaggctcaggaaacccttgcaggtgtttcgagttaattagacaattcaagtgatttgtttaataccctactagtatactttttcatgatattctaatatttagagataggatatttgagttttcttaagctgtaagccataatcagcaataaatcagaataaaaggcttgcaatatttcagttgatttgtaatgaatccagaatgcatgacatttttgtttttttaattgcattacagaaaataaagaacttcatcacaatattctaattttctgagacagtcctgtatataCCTTTTTATAGTGGAATTAAAAAATACATTTTGTTTTATTAAACAAACTCAGCGACATTTCTCAATCTGCAGCTATGTAACATTTTGTCTTAACGATGAATAAACTGTAAAATAGCCAAATTATGATTGAAATGAGAGAAAAAAATCTTATTTTATAAATAAGTCATACAAAACGTAAAGTATGATATCAAATCCTTTTTTTGCTAATTACTGATTTAGTTAATTTAAGTTAATTGAATCAAGTGTCGGTGCTGCTAATCATCCAGACCTTCAGTATTTTAACGGCTACTTTGCTCGTGAGCGACATTTCATACATTTGACAAGTGACTCGTGGAAAAGGTCGATTCCCCCCGCTGACCCTCCTGTCGTCTCCTCAGGTCCATTCGGGTGTCGCCAGGCGCTTTGGCTTCGACTGCACCCCCGACCCCGACACGGGCGGCTGCCTGGAGTTCCCTCCCAGCTCGCAGCCCCTCCTCCAGTTCGTCTCCGTCCTCTACCGGGACATGGGGGACAACATCGAGGGGGTCCGCGCCCGGGCCTTCCACGACCCGGACAACGACGCCcagcagaaccacagcaccagcagcaacagcgacagcggcatcggcaacttcctgccggaggagaagagcagcaACCGGGTGCTTCTGGTGGATCTGGGAGGGCCCCCGAACCACAGCCACGCCTCGGGGCCACGCCACTGGGACAGCCCGCCTTCGTCCCAGCAGGCCTGGAGCCCCACCCTCGGAGCCGCCGCCGCCGGCCCCCACCCGCCTCCTCCTCTCAGGAATGGCCACTACCGTCACGAGCCGCACCCGGCTGACCTCCCCCACCCTCTCCCCGACGGCGCCGGCAGGCACTCTCGAGGAGTCCACTCGCACCACTACTCGCCGGggaagcggggaggagctgcagggggaggaggagaaaagaaggaggaggaggaggaggTACAGGGGTAGATGGTGCAGCCTTTTCTTTTGTTTACCCCCATCGTCTCCAGAGTTGACCCAAATGGCCCTTGGTTACCAAACTATGGAAACTGGAAGCAGCCTCGCCGCGTCGGACGCAGACACGGTCGCGTCCGCGCCGTGGAGGTGGCGAGAGGACGGTCGGGGTACGGCTTCACGCTGGCGGGCCAAGGGCCGTGCGTCCTCAGCTGCGTCcTCAAAGGCAGCCCCGCCGACCACGTGGGCCTGCGCTCGGGCGACCGCGTCCTCTCCGTCAACGACGCCGACGTCTCCGAGGCGTCGCACGAAGACGTGGTCAAGCTGATCGGGCGCTGCTCCGGCGTCCTGAAGCTGGTCGTCGCCGAAGTGGAACGTCACAGGCGGcaacatcaacaacaacaacaacaacaacGCGCCGCCCCGAGTCGTCACCAGAGCAGCAGCAGCGCGATGGCGGCtTCCTGGCCGGACTCGTGCTCGAGCGACGACGAGTTGGACGCTTTCTACGACGACGGCGCGaACAACAACGGCGGCGGCAGGTCGGGCTGCGGGGCCCGCGGCGGGTGGTACAAACCCAAACTGGATTCTAAGCAGCTGGGCATCAACCGGGCGGAGAAGGTCGTGGCGGAGCTGCAGTCCGGAGGGATTTTCAACATGATCTTCGAGAACTCCAGCCAGTCCTCCAGCAGCTCGGACAAGGACCGGCCCGGAcCCGGCGGCTCGAAGGCGCCGCGGCCGCtCTCCGAGCCGGAGTTCCCCCTGTATCGGAACGCCTCCGGATCCCGGAGCGACCCCAACCTGCTCTCCGAGGAGGAGATGGCCCGAGTTCTGAGCGACGACTCGGTCTTCCTGGAGGCGGACTTCCGCCACCTCCACCTgCAGCACGAaGAAGAGCCGGACCTGGACGACGTGGGAGACTTGGGCCTGGAGCCCGGCGAaGGCATCCTCAACGCGGGCATGGTCGTCGGCTACCTGGGCTCCATCGAGCTGGCGTCCATCGGGGCGAGCTTGGAGAGCGACAGCCTGCAGGCCATCAGGTGCAGCATGAGGCGCCTCCGGGCCGAGCAGAAGGTCCACTCGCTGGTTCtgatgaagGTGATGCACGACAGCGTGCGTCTCTGCAGTGACAGAGGTCAGGTTCTGGCCACCTACCCTGCAGAGAAACTGGCCTTCAGCGCCTGTTGCCCCGACGACCGTCGGTTCTTCGGCCTGGTGACGATGCAGGCGACCGACGACCACGACGACTGTCACTTCAGCAACGGGCGAGACGAAGAGGGCGGTTTGAGGACTTCCTGTCACGTGTTCATCGTGGACCCCGATCTCTGTCACCACCAGGTCCATTCGGGTGTCGCCAGGCGCTTTGGCTTCGACTGCACCCCCGACCCCGACACGGGCGGCTGCCTGGAGTTCCCTCCCAGCTCGCAGCCCCTCCTCCAGTTCGTCTCCGTCCTCTACCGGGACATGGGGGACAACATCGAGGGGGTCCGCGCCCGGGCCTTCCACGACCCGGACAACGACGCCcagcagaaccacagcaccagcagcaacagcgacagcggcatcggcaacttcctgccggaggagaagagcagcaACCGGGTGCTTCTGGTGGATCTGGGAGGGCCCCCGAACCACAGCCACGCCTCGGGGCCACGCCACTGGGACAGCCCGCCTTCGTCCCAGCAGGCCTGGAGCCCCACCCTCGGAGCCGCCGCCGCCGGCCCCCACCCGCCTCCTCCTCTCAGGAATGGCCACTACCGTCACGAGCCGCACCCGGCTGACCTCCCCCACCCTCTCCCCGACGGCGCCGGCAGGCACTCTCGAGGAGTCCACTCGCACCACTACTCGCCGGggaagcggggaggagctgcagggggaggaggagaaaagaaggaggaggaggaggaggTACAGGGGTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR046995	Family	Regulator of G-protein signaling 10/12/14-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45945	REGULATOR OF G-PROTEIN SIGNALING LOCO	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0008277	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-