Detailed information of HS21403 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS21403SPARC OSTEONECTINchr241135445111361419-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00050Kazal_1Kazal-type serine protease inhibitor domainDomainInterproscan
PF09289FOLNFollistatin/Osteonectin-like EGF domainDomainInterproscan
PF10591SPARC_Ca_bdgSecreted protein acidic and rich in cysteine Ca binding regionDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001999Conserved_siteOsteonectin-like, conserved siteInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR002350DomainKazal domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR015369DomainFollistatin/Osteonectin EGF domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR019577DomainSPARC/Testican, calcium-binding domainInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13866SPARC OSTEONECTINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005518Molecular Functioncollagen bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan
GO:0050840Molecular Functionextracellular matrix bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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