Gene detail

Detailed information of HS21073 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS21073	EWING'S TUMOR-ASSOCIATED ANTIGEN 1 ETAA1	chr24	2576037	2580951	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS21073

ACGAGAGTACAACTCGGAGTTAACTCAAACGCGGTCGGCCCGGACTCACCGGAAACACGTCCGGTGGCCATGAACCGGAGCCGCAGGAcggtcgagcctccggtcgagcctccggtcgagcctccggtcgagcctccggtcgGTGTGACGGTCGGTCTGACGGGCCCGTCGAACCCGAACCGGCTGAGGAGAAGCTTCAGGCGGACCCAGACAGCGGCGGACGTCGGCTCTCCGAAGAGCCAGCAGCCGGGTCAGAACGCGTCTTTACGTCCGTCGAGTTTCCTTTAGGCGCCTTTActccttcctcttgtctccttcctctgttgtctccttcctcttgtctccttcctctgttgtctccttcctctgttgtctccttcctctcttgtctccttctgctcttgtctccttcctcttgtctccttcctctcttgtctccttcctctgttgtctccttcctctcttgtctccttcctctgttgtctccttcctctgttgtctccttctgctcttgtctccttcctctgttgtctccttcctcttgtctccttctgctcttgtctccttcctctgttgtctccttcctgttgtctctttcctcttgtctccttctgctcttgtctccttcctctgttgtctccttcctgttgtctctttcctcttgtctccttcttctcttgtctccttcctctcttgtctctttcctcttgtctcctcttgtttccttcttctcgtgtctccttcctctcttcctcttttgtccatcctctcttgtctctttcctcttgtctccttcttgtctgtttcctcttgtatcaatcctcttgtctccttctcttgtctccttcctctgttgtccctttcctcttgtctccttcctctcttgtttccttcctctcgtctcttttctcttgtctccttcctatcttgtttccttcctctctcgttctttctgctgttatctccttcctctcttgcctccttcctctcttctctccttctcttgtgtccttcctctcttgtctccttcatctcATTTTTTCAAGTCTCACATTGGAAGTGAGTTCAATTCAACTGCAAAGCAAATGTAtTTTaGTGGATTaAtCTGTAGAATATGTGTTTATTTACCTTTTTAAGATCATAACGATCCTTATGATGTTCACCTTTATCCATTTGAAaCAAACCGTTTGAGATATCCACACGTTCAGCTGGATATCCATCAGTGtATGGATTACAGCAACTCCGGGCCcTGACCTCTGACCTCTCCCTGAAGTGAAGTCTCGTTGTGGTTTTGTTAATCTTTCACTCGTCCTCCTGCAGAGTTCAAGACCCCGACCCGGGTCCCGAGGCCCCGAGCCGGCGCCGGCTTCAGCGCCGAGTCTCCGAACAACGACTCTGACTTCCAGCAGGACATCGTGTGGGACGCCACGTCTCCCTCGCCCGGCCGGCcCGGTAAACCTCCGGCCTCGCCGTGGCGCCGCTCGGCGGGTTCCTCCCCTCCACGCTGTTTCTGACTCTTTTATGTTCTCATTGTTTCTGTTTTGACCTTTTCGaGaAGCTCCTCAAAGCGCGACACGAATAACgAGAGTTATTATTCATACATTGCTGTCGTGACGGGACAGTTGATTgATTATCTATCAGCATGATTATTGATGACTTCCTTTCAGGCCCACGAAAGTCAAACATTTCACGTTTTATAATCACGTTTCTTAGTTTTTTCTATATTTTTATAGACATtTGGAATAATTAATGCTGAATTAGAGCTGTGTGTGTTCTCAGGTAAAAAAGGAAAGCACCAGAAGCCTGGAGCTGTGGACATCTCTGATATTGTTAACAGGATCGCCCCAAAGGTCAGGATTAAATATGACCCCCCCCcacacacacacacacacacacacactctgctccacaatgagCCGGACTCTGAGCCAATGAGCTGCGTTGGTTCTCTTGAAGCACGGCCGGCCGGCGGTCTCCGAGCCGACGCTGCAGCAGTGGATCGGAGACAGCGCCGCCATCCCCTGCACGCCCGACGCCCAGGGCCCCAAACCCAAGAAGAAGTCCCCGCGGTAGGTTCtGGAGCACTGAGCGGTTGGtcttcgtcgtcatcatcctcctcctcctcTCTTTAGAAGTCTCCAGGCATGTCGGGGGTTGGAGGTTGTGgGATgATGAGATGATAACTGTGACTTCAGTGTGTTGATACACATTAGTACCCTGCTCATCATCAGGTTTaTAGATATCTCAtattaaatgttttattcactgttttattaaatgttttattGTGTGGATTCAACaGTCAAATATTTcTAAGTGAAAATAAATTTTTTAAGACTAGAAATTCTGCAGAGCCGCAACACTGGAGCGTAATGCGGATAGAAAACATTAAGAAAAATAAATGTAAATAATTCAGAAAATTGTACAAATGAGTTGTATtaaAAAAAATATATaTATATTTTTTaaaaattaAAGTAAATAATGAAATGTCTCCCGTTACATTTGAATGCCTGATTTTTAAACCgTTCTTAAGAAGCTAAATCCaCGGcgcctccaCGCGGCTCTCGGCGTGACCGACTaACTGACGGCCTCGTGCCGATGACCCCGCGTCATCGCGGTGACCTTGATGTTGTTGTTTTTGTTTTGcCGCAGGCCGAACGGCGTGGACGACCTGCTGAAGCTCGCCAAGCAGTTCGACTTCAACATGTTCCaTCGGgacgaagaagaagaagaagaagaaggaaaaggaaaaggagTGGACGAGCGGCGCCgCCcGGAGCTTCAGTCGGAGGACGACGGCTCGGATtTGGAGGACGCCGATCCGAGCGCCGCTTCGTTGCCCGCGAGTCACGGGCCGGCGGAGCGGCGCCCGGATCCACTCGCGGAGGACGATCTGGACTTCCTGTTCGACGGACCGACGCAGTTTTTAAGCGGAAGTCTGAGTCCGGGGtCGTCGGCTCGGCCGTCGCAGGTCCAACCCGCGTCCAGAGAGGCTGCTGGGAAACCGGCCGCTCCCACGCACGGCGCCGCGTCGGGCGTCTCCGCCGCGGCGAAAGACGAGTTTGAGGACGACTGGGAGAACGATGACCTGCTGAACGACTCGTTGCTGTTGGAGATGACCCAGAACCCCCAGAGCTTCGCCGGCCCGCGGCTCAGCTCGACCCAGAaGCCCCTCGaCGAAGCGCaGCGTCACCGGGAGAGTCCGGCGAGCGGCGCCGTCCACGCGGCgCCCAACGGGAGACAAAGGGCGACTTTCACACTGGAGCCCAATCCCAATGCTTCTTTCCAAAGAATCCAGACGAACCCGAAGGACCGCGGCGCCGCgGCGGGAGACGCTCCGCAGAACCGGTCCTCTGCTCGGGATCCACCGGTTCCTCCGAGGGCTTCCGACCCGACCGCGTCGAACGCGTCGGCCGTGGAAGCGTCTCGGAGCTTCCCGACGGCCCCCGCgGCCCCCGCCCTCCCGGACGAGGAGGACCTGTCCTtGTTCTTCTCGGTCGACCCGGTTTGGGACGACCCGGCCGACGACGACCTGCTGTGCGAGATGTGCGAAAGCGTGGAGAGCCGGCTGCAGAGCGCCGAGAGCGCGTCAGAGCGGGGAGCGCCGCCGCCGTCCAACGGGAACCCGCAGCCGGCCGACCGGCGACCTCTTGACCCCAAGAGACAGACGGCGGCGAGCCGCCCCGCGGCCGGCGGTTCTGGCGGCGCTGCAGGCGTCCGGGTGACGGAGGCGTTCAGGGACCCGCACGCAAAAAACTCTTCAGGGTCCACAAACGGCTCGACGTGGAGCCGCCGGGTCCCGTCCGCCTTCAAGAAGCCAAACAACCCGGTTACCACGGTGACCAGCGACGGTAAGAACCACACCTTCAATACATCCCCCAAATGTACAACATTAATGCATCTTTTTTATTTAGTTTAACGGTTCTTTATAATATATATTTTTTTAAAGCAGCAAACAACtatttgctatgtctctctctctctctctctctctctctttatctttctatgtctctctctatgtctctctctatgtctctctctctctctatgtctttctctgtctctctctcactatgtctctctctctgtctctctctttctatgtctctttctctctctgtctctctctctttctctctatgtctctctctatctctctctctatgtctctctctatgtctctctctcactatgtctctctctctgtctctctctttctttttctctctctatgtctctttctctctctctctctctatgtctctctctctttctctctctgtctctctctctctttctctctctctctctttctatgtctctctctcactatgtctctctctttctttttctctctctctatgtctctctttctttctctctctctatgtctctctctctctgtctctctctctctctatgtctctctctctttcgctctatgtctctctctatctctctctctctgtctttctcaatgtctctctctcactatgtctctctctctgtctctctatgtctctctctctttctttttctctctctctctctctctctctctctctctctctctcaggttgtcattgtttgcactgttggtccttttaggcgccatgttgagagccgtgtggagtcaacCCACAGCTGGTTCCTTCGTGACCTTTAAGGGAACTCTGTAACTTCTTTAAACCGACTTTCCTTTTGTCGTCTTTGTCtTATTTTGTAGTTTTACCtATACGGATTTGTGTACGTTGTGTTTTTCCTCGTGGACGACGCGAGGCGATCTGAACTCGACTCTCcCTCCTCAGTCGTGGCTCAATGTTCGGCAGCAGAGATCGAGCTGAAGAAGCAGCGAGCGATGGAGAGACGACGGCAGCGACTGCAGGGCGCCCACAACCTCCGAGCTCCcaccACGAGAGTACAACTCGGAGTTAACTCAAACGCGGTCGGCCCGGACTCACCGGAAACACGTCCGGTGGCCATGAACCGGAGCCGCAGGAcggtcgagcctccggtcgagcctccggtcgagcctccggtcgagcctccggtcgGTGTGACGGTCGGTCTGACGGGCCCGTCGAACCCGAACCGGCTGAGGAGAAGCTTCAGGCGGACCCAGACAGCGGCGGACGTCGGCTCTCCGAAGAGCCAGCAGCCGGAGTTCAAGACCCCGACCCGGGTCCCGAGGCCCCGAGCCGGCGCCGGCTTCAGCGCCGAGTCTCCGAACAACGACTCTGACTTCCAGCAGGACATCGTGTGGGACGCCACGTCTCCCTCGCCCGGCCGGCcCGGTAAAAAAGGAAAGCACCAGAAGCCTGGAGCTGTGGACATCTCTGATATTGTTAACAGGATCGCCCCAAAGCACGGCCGGCCGGCGGTCTCCGAGCCGACGCTGCAGCAGTGGATCGGAGACAGCGCCGCCATCCCCTGCACGCCCGACGCCCAGGGCCCCAAACCCAAGAAGAAGTCCCCGCGGCCGAACGGCGTGGACGACCTGCTGAAGCTCGCCAAGCAGTTCGACTTCAACATGTTCCaTCGGgacgaagaagaagaagaagaagaaggaaaaggaaaaggagTGGACGAGCGGCGCCgCCcGGAGCTTCAGTCGGAGGACGACGGCTCGGATtTGGAGGACGCCGATCCGAGCGCCGCTTCGTTGCCCGCGAGTCACGGGCCGGCGGAGCGGCGCCCGGATCCACTCGCGGAGGACGATCTGGACTTCCTGTTCGACGGACCGACGCAGTTTTTAAGCGGAAGTCTGAGTCCGGGGtCGTCGGCTCGGCCGTCGCAGGTCCAACCCGCGTCCAGAGAGGCTGCTGGGAAACCGGCCGCTCCCACGCACGGCGCCGCGTCGGGCGTCTCCGCCGCGGCGAAAGACGAGTTTGAGGACGACTGGGAGAACGATGACCTGCTGAACGACTCGTTGCTGTTGGAGATGACCCAGAACCCCCAGAGCTTCGCCGGCCCGCGGCTCAGCTCGACCCAGAaGCCCCTCGaCGAAGCGCaGCGTCACCGGGAGAGTCCGGCGAGCGGCGCCGTCCACGCGGCgCCCAACGGGAGACAAAGGGCGACTTTCACACTGGAGCCCAATCCCAATGCTTCTTTCCAAAGAATCCAGACGAACCCGAAGGACCGCGGCGCCGCgGCGGGAGACGCTCCGCAGAACCGGTCCTCTGCTCGGGATCCACCGGTTCCTCCGAGGGCTTCCGACCCGACCGCGTCGAACGCGTCGGCCGTGGAAGCGTCTCGGAGCTTCCCGACGGCCCCCGCgGCCCCCGCCCTCCCGGACGAGGAGGACCTGTCCTtGTTCTTCTCGGTCGACCCGGTTTGGGACGACCCGGCCGACGACGACCTGCTGTGCGAGATGTGCGAAAGCGTGGAGAGCCGGCTGCAGAGCGCCGAGAGCGCGTCAGAGCGGGGAGCGCCGCCGCCGTCCAACGGGAACCCGCAGCCGGCCGACCGGCGACCTCTTGACCCCAAGAGACAGACGGCGGCGAGCCGCCCCGCGGCCGGCGGTTCTGGCGGCGCTGCAGGCGTCCGGGTGACGGAGGCGTTCAGGGACCCGCACGCAAAAAACTCTTCAGGGTCCACAAACGGCTCGACGTGGAGCCGCCGGGTCCCGTCCGCCTTCAAGAAGCCAAACAACCCGGTTACCACGGTGACCAGCGACGTCGTGGCTCAATGTTCGGCAGCAGAGATCGAGCTGAAGAAGCAGCGAGCGATGGAGAGACGACGGCAGCGACTGCAGGGCGCCCACAACCTCCGAGCTCCcacc

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15350	ETAA1	Ewing's tumour-associated antigen 1 homologue	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029406	Family	Ewing's tumour-associated antigen 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16434	EWING'S TUMOR-ASSOCIATED ANTIGEN 1 ETAA1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0031297	Biological Process	replication fork processing	Interproscan
GO:0043539	Molecular Function	protein serine/threonine kinase activator activity	Interproscan
GO:0043596	Cellular Component	nuclear replication fork	Interproscan
GO:0071902	Biological Process	positive regulation of protein serine/threonine kinase activity	Interproscan
GO:2000001	Biological Process	regulation of DNA damage checkpoint	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-