Gene detail

Detailed information of HS20956 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS20956	HIT FAMILY PROTEIN 1	chr24	462093	464305	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS20956

ATGTCCTCCACGGGCCCCCGGCATGTGGTCTGGCAGTCCGGGGGTCTGGTGGCCTACCTGCACCCCCGGCCCTGGACCCCCGGCTCCGTGGTCCTGGAGCACCGCGCGCCCGGCCGCCGGGGGGGGCGGAGTCTTCCAGCTGGAGGAGCCGGACTTCCTGTCCTGGCTGCTGGCGGCGCGCGCAGCGGCCGAGCTGCTGTGTGCGCTGCTCGGGGTGCGCAGGTGTGCTCTGGTGAGCCGGCCCCACGAGGACCGGCCCGCCCAGGTgagggggtcaacacagcttctagaaactacttcttatacatatatatatataatattatatatatgtatatatatattatatgtatatatataatgtatacatatattatgtatgtatatatatatgtatatatattatatatttatatgtatgtgtatatatatatattatatatgagtatgtgtattatatatgtatttatatatatatattatatatttatatattatatctttatatatgtatgtatatatatatattatatatgagtatatatattatatatgtatatatatgtatatacatacatacatatatatatatgtgtgtgtagtttgaccttccttcctttacgggcgttggattccatgaaaggttgtgaCCGCTTCAGCTGCTGCTCGTCACCTCCAGGGGCCAAATCCAGAGCTTTATCTCTGCTTgCCGATAGGAAACAGTGTTTTTAGAAGCTCTTTAAGtgcaagtgcaattatctgtgttctttttatttattattattttgcaagtcgtgtttcggtatgttttgtgtttttttatatctatatatatatatataatatatttatatattatatctttatatatgtatgtatatatatattatatatgagtatatatattatatatgtatttatatatatattatatatgtctatttatatatatgtatatatatataatatatatgtatgtatgtatgtatatatatatattatatatatatatacatacatccatatatatatatatatattatatatttatatattatatctttatatttgtatgtatatatatattatatatgagtatatatattacatatgtatttatatatacactaccgttcaaaagtttgggatcacttagaaatgtctttatttttcaaagaaaagcactgttcttttcaatgaagataacattaaatcaatcataaatacactctctacattgttaatgtggtaaatgactattctaggtggaaacgtctggtttctaatgaaatatctccatcggtgtatagaggcccatttccatcaacgatcactccagtgttctgatggtacattgtgtttgctaatcgccttagaagactaatgtctgattagaaaacccgtgcaattatgttagcacagctgaaaacagttatgctggtgatataagctatacaactggccttcctttgagcttgaagtttgtagaacaaaattaatatttcaaatattaatcattatttctaaccttgtcaatgtcttgactatattttatattcatttgataaataaaagtgtgctttttcatggaagacacgaaattgtctgggtgatcccaaacttttgaacggtagtgtatatattatatatgtctatttatatgtatgtatatatatatatatacatacatacatatatatatatgtgtgtgtgtagtttgaccttcctttcagataagcgtcctCCCTCTTCACGGTATCGGTGCAGAGTGGCGCCCCCACCTGGCGGGAGAGGAGGAGCACAACGCCCTGGACCCGGGCTACTGCACCTCCAGAACCGCCACCCGGTGGAGCGACTCCCGGCTGACTGAGGTCCAGACCAGGATCCGGGCCGGGCTGCCGGACGGCGCCCCCGACCTCAGCTTCCTGGGGGCCGACCCAGCCCACCCGGGCCTGTTCCCGCGCATCGTCCGGGGGGAGGAGCCTCAGTGGCGCGTGTGGGAGGACGAGGGCCACGTGGCCTTCCTCACCCCCTTCCCCAACTCCCCCGGCTTCACCGTGCTCGTCCCGCGCCGACCTTTGACCTCGGACGTGTTCCGCCTGGAGACGGAGGACTACGAGGGCCTGGTGCTGGCGGCCCGGAAGGCGGCGAGGCTCCTGGAGGCGGGGCTGATCTCGAGGGCTTCGAGATCGACTACGCTCACGCCAAGCTGAATGTCCTCCACGGGCCCCCGGCATGTGGTCTGGCAGTCCGGGGGTCTGGTGGCCTACCTGCACCCCCGGCCCTGGACCCCCGGCTCCGTGGTCCTGGAGCACCGCGCGCCCGGCCGCCGGGGGGGGCGGAGTCTTCCAGCTGGAGGAGCCGGACTTCCTGTCCTGGCTGCTGGCGGCGCGCGCAGCGGCCGAGCTGCTGTGTGCGCTGCTCGGGGTGCGCAGataagcgtcctCCCTCTTCACGGTATCGGTGCAGAGTGGCGCCCCCACCTGGCGGGAGAGGAGGAGCACAACGCCCTGGACCCGGGCTACTGCACCTCCAGAACCGCCACCCGGTGGAGCGACTCCCGGCTGACTGAGGTCCAGACCAGGATCCGGGCCGGGCTGCCGGACGGCGCCCCCGACCTCAGCTTCCTGGGGGCCGACCCAGCCCACCCGGGCCTGTTCCCGCGCATCGTCCGGGGGGAGGAGCCTCAGTGGCGCGTGTGGGAGGACGAGGGCCACGTGGCCTTCCTCACCCCCTTCCCCAACTCCCCCGGCTTCACCGTGCTCGTCCCGCGCCGACCTTTGACCTCGGACGTGTTCCGCCTGGAGACGGAGGACTACGAGGGCCTGGTGCTGGCGGCCCGGAAGGCGGCGAGGCTCCTGGAGGCGGGGCTGATCTCGAGGGCTTCGAGATCGACTACGCTCACGCCAAGCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01230	HIT	HIT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001310	Family	Histidine triad (HIT) protein	Interproscan
IPR011146	Domain	HIT-like domain	Interproscan
IPR036265	Homologous_superfamily	HIT-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46648	HIT FAMILY PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009117	Biological Process	nucleotide metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-