Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
HS20737 | SNF2/RAD54 HELICASE FAMILY | chr23 | 19317854 | 19332750 | - |
CDS | |||||
HS20737 | |||||
Transcript |
HS20737 |
Protein |
HS20737 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00176 | SNF2-rel_dom | SNF2-related domain | Domain | Interproscan |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
PF07529 | HSA | HSA domain | Family | Interproscan |
PF07533 | BRK | BRK domain | Domain | Interproscan |
PF08880 | QLQ | QLQ | Domain | Interproscan |
PF14619 | SnAC | Snf2-ATP coupling, chromatin remodelling complex | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000330 | Domain | SNF2, N-terminal | Interproscan |
IPR001487 | Domain | Bromodomain | Interproscan |
IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
IPR006576 | Domain | BRK domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR014012 | Domain | Helicase/SANT-associated domain | Interproscan |
IPR014978 | Domain | Glutamine-Leucine-Glutamine, QLQ | Interproscan |
IPR018359 | Conserved_site | Bromodomain, conserved site | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR029295 | Domain | Snf2, ATP coupling domain | Interproscan |
IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
IPR037259 | Homologous_superfamily | BRK domain superfamily | Interproscan |
IPR038718 | Homologous_superfamily | SNF2-like, N-terminal domain superfamily | Interproscan |
IPR049730 | Domain | SNF2/RAD5-like, C-terminal helicase domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10799 | SNF2/RAD54 HELICASE FAMILY | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
GO:0008094 | Molecular Function | ATP-dependent activity, acting on DNA | Interproscan |
GO:0008134 | Molecular Function | transcription factor binding | Interproscan |
GO:0042393 | Molecular Function | histone binding | Interproscan |
GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
GO:0140658 | Molecular Function | ATP-dependent chromatin remodeler activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |