Gene detail

Detailed information of HS20713 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS20713	SEROTONIN N-ACETYLTRANSFERASE	chr23	19032782	19034796	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS20713

ATGTCCGTCGTGGGCTCGCAGCCTTTCATCAAACCGATGCAGCGACCGGCCTCGGTGTCCCCGGGACTCCAGAGGAGACACACGCTGCCCGCCAGCGAGGTCCGGCCGCTCAACACGCAGGACGCCATCAGCGTCTTTGAGATCGAGCGGGAGGGTAAGTGGGTCGGCgaCCGTGACcTCACGTGAGGCGGACGTCATGAGGCGGACAGTGGATGCTTTAACGCGAGGATCTGTGCGTAAAACCACGTCGAGGAGATCTAAttctaaATATGTGCATTTGATTCATCAGTATTaTTTTATTCTCACTtTAAATATGTTACATCTGTTACGACtAGAGAGAAATGTTTATTCCGTAATTTGCGCCTTTAAgTGTGTAAAAAAAGTAGTGCCAAACTATTTTTTTAGAAAGGtctctctctctctcccccttctccctctctctaattcaataggctttattggcatgaatgtcccaacaacagtattgccaaagcatcaagacacagcgacactaaaatataaataaaatatacaattcatatggataataatatgacagaaataactacattgaaagaaagtgcagttgtaataatctctctctctctcAGCATTTATCTCCGTGTCAGGTGAGTGTCCCCTCCACCTGGATGAGGTGCGTCACTTCCTCACCTTGTGCCCGGAGCTGTCCATGGGCTGGCTGGAGGAGGGCCGCCTGGTGGCTTTCATCATCGGCTCCCTCTGGGACAAGGACCGACTCACTGAGGTAAGAGACCCCCGTGCGGCACACACCCACCATAACTGATCCTCACGCTACACacactacccttcaagagtttggggtcaccaaggcaatgttgtgttttctacgaaaactcacttttatttatcaaatgaatagaaaatatagtcaagacattgagacggttagaaataatgatttttatttgaaatatttatttagttcttcaaacttgtggctcaaaggccagtgttatagcttctctcaccagcataactgttttcagctgcgctcacataaaagggttttctaaccctccgttagtcttctaaggcgataacacaatgtaccattagaacactggagatgggtctctacacatagaggtttcattaaacaccagagaataatcatttaccacattaactatgtatagagtgtatttatgattaatcttatctttattaaaagaaacagagctttAATTAGAAaaactagaatgggcactcggtagagcgcataccttcgcatatcacaagattgggcattgaattatgaacatgttggcattagttgcatgccaattggataaaaattgaccgcgctatagtaaaaagaaaatgttgaccttttcatgaccttgacctttgacccgatcgatcccaaaatctaatcaaatggtccccggataataaccaatcatcccaccaaatttcatgcgattcagtttttgagttatgcaagtaacacgcatacaaataaataaataaataaatacacggtgatcaaaacattaccttccgcattttcaatgcgaaggtaataatggcatttctaattgaccccatgcttgtgaacggtcgtgtTCATGTCAGTCGTGTTGATGACCCCCTTCGGCCcCACGCAGGACGCGCTGGTCCTCCACAAGCCGCGCGGCTCCACGGTCCACATCCACATCCTGGCGGTGCACCGCACCTTCCGGCAGCAGGGCAAAGGGCCCATgCTGCTGTGGCGCTACCTGCAGTCCCTGCGCTGCCTGCCCAGCGTGCGCCGCGCGCTCCTCATGTGCGAGGACGTCCTGGTGCCCTTCTACCACAAGTCTGGCTTCAAGGTGCTGGGCCGCTGCGCCATCACCGTGGCCAACATGACCTTCACGGAGATGTGCTACCCGATCAGCGGCCACGCGTACATGCGGCGCAACAGCGAGGCCATCCGCTTCCCGCAGCATCACGTGACTCTGCCGCTGGCGAACACGGGGGAGCACGCGGACGCGATGTCCGTCGTGGGCTCGCAGCCTTTCATCAAACCGATGCAGCGACCGGCCTCGGTGTCCCCGGGACTCCAGAGGAGACACACGCTGCCCGCCAGCGAGGTCCGGCCGCTCAACACGCAGGACGCCATCAGCGTCTTTGAGATCGAGCGGGAGGCATTTATCTCCGTGTCAGGTGAGTGTCCCCTCCACCTGGATGAGGTGCGTCACTTCCTCACCTTGTGCCCGGAGCTGTCCATGGGCTGGCTGGAGGAGGGCCGCCTGGTGGCTTTCATCATCGGCTCCCTCTGGGACAAGGACCGACTCACTGAGGACGCGCTGGTCCTCCACAAGCCGCGCGGCTCCACGGTCCACATCCACATCCTGGCGGTGCACCGCACCTTCCGGCAGCAGGGCAAAGGGCCCATgCTGCTGTGGCGCTACCTGCAGTCCCTGCGCTGCCTGCCCAGCGTGCGCCGCGCGCTCCTCATGTGCGAGGACGTCCTGGTGCCCTTCTACCACAAGTCTGGCTTCAAGGTGCTGGGCCGCTGCGCCATCACCGTGGCCAACATGACCTTCACGGAGATGTGCTACCCGATCAGCGGCCACGCGTACATGCGGCGCAACAGCGAGGCCATCCGCTTCCCGCAGCATCACGTGACTCTGCCGCTGGCGAACACGGGGGAGCACGCGGACGCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00583	Acetyltransf_1	Acetyltransferase (GNAT) family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR051635	Family	Serotonin N-acetyltransferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10908	SEROTONIN N-ACETYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004059	Molecular Function	aralkylamine N-acetyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007623	Biological Process	circadian rhythm	Interproscan
GO:0009416	Biological Process	response to light stimulus	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-