Gene detail

Detailed information of HS20529 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS20529	TELETHONIN	chr23	15756932	15758074	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS20529

TTACCCCACTTACCCATTACCCCGCCTCAAAATGTGGACTTCCAGCTTACAGGGAATGAGACACGGAGCATCTGGTGTCGGATGTCAGTGCAGACTGATTGTAGAGTGACAACATGGATCAGGAATAGCAACAGAACGTCTATAAAAACACAGACCCGAGCCCAGACGGCACAAAGAGACACAGCCAGGAGATACAAGCTGAAGCATCCCTGTTCCCTCGAACAAACAGCCTCATCCCAGACCCAACAACACACATTGAGACTGATCCACAAGACCGACTGGATACACCCCGAGACAGATCTTCCCACAGCAGAGATGATGCCAGTGTGTACCGTCCTGGAGAAGCGTAACAGTGTGGTGGTGGGAGCTGAGCTGGCCTGCAGCGTACAGGAAGAGAACACGGCTCATAGGGAGAGCTACAGCGCTGACTGGCAGAGTGTCAGTCTCAAGACTCGACCCCAGGACAGGTGAGAGCtcacagacccaacagaaaacatcacagacccaacagaaaacatcaTATCAAATCAAACATGGGATTGAGTGGTAAAAATCAATTAATTACATCCTGGCTGTGATTGAAAATCATTCGTGCCATCATCAGAATGGATTGAGATCTACTTTCACTTCTTCATACAGACTCTTCTCATATTGGAAGGCAGTTAAAGTCTAATTACGAAGGTAAATCACAATGAGTGCTTCCACAGTTTCTCACAACTTGTCTCTGAccccccccccccccccccccccTGCAGGCAGACAGTAAACCTAAATGACGACTCTCGTAGGGAGACACTGTCCCGCCAGTGGCAGGTCCGTTCGCTGAAGCAGACCTGCCCCTCCGGTGTCTTCAGAGTGGGCACCGTGGAACGAGGGGTGAGGGAGCACCAGCTGCTGCCGAAGAGAAAAACCCTCCCCTTGCCCATCTTCACCCCTGCAGAGCTGGGTGTCAGGCTCGGACGCGGAGCCCCGCACACCGAGCAGGACCTCCACCCCTTCCCCGTCCCAGACGGAGCCTGCCCCAACAAGAAGACCGTGGACGAGATCACAAGAGACCTCCCCCCAGTCAAGCCAAGGCTCATGGAGTTCTTCAAAGGGCCCAGAGACCTTGGGCGCTCGATGTCTCAAGAGGCCCAGAGAGGGTTACCCCACTTACCCATTACCCCGCCTCAAAATGTGGACTTCCAGCTTACAGGGAATGAGACACGGAGCATCTGGTGTCGGATGTCAGTGCAGACTGATTGTAGAGTGACAACATGGATCAGGAATAGCAACAGAACGTCTATAAAAACACAGACCCGAGCCCAGACGGCACAAAGAGACACAGCCAGGAGATACAAGCTGAAGCATCCCTGTTCCCTCGAACAAACAGCCTCATCCCAGACCCAACAACACACATTGAGACTGATCCACAAGACCGACTGGATACACCCCGAGACAGATCTTCCCACAGCAGAGATGATGCCAGTGTGTACCGTCCTGGAGAAGCGTAACAGTGTGGTGGTGGGAGCTGAGCTGGCCTGCAGCGTACAGGAAGAGAACACGGCTCATAGGGAGAGCTACAGCGCTGACTGGCAGAGTGTCAGTCTCAAGACTCGACCCCAGGACAGGCAGACAGTAAACCTAAATGACGACTCTCGTAGGGAGACACTGTCCCGCCAGTGGCAGGTCCGTTCGCTGAAGCAGACCTGCCCCTCCGGTGTCTTCAGAGTGGGCACCGTGGAACGAGGGGTGAGGGAGCACCAGCTGCTGCCGAAGAGAAAAACCCTCCCCTTGCCCATCTTCACCCCTGCAGAGCTGGGTGTCAGGCTCGGACGCGGAGCCCCGCACACCGAGCAGGACCTCCACCCCTTCCCCGTCCCAGACGGAGCCTGCCCCAACAAGAAGACCGTGGACGAGATCACAAGAGACCTCCCCCCAGTCAAGCCAAGGCTCATGGAGTTCTTCAAAGGGCCCAGAGACCTTGGGCGCTCGATGTCTCAAGAGGCCCAGAGAGGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09470	Telethonin	Telethonin protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015667	Family	Telethonin	Interproscan
IPR023111	Homologous_superfamily	Titin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15143	TELETHONIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003009	Biological Process	skeletal muscle contraction	Interproscan
GO:0008307	Molecular Function	structural constituent of muscle	Interproscan
GO:0030018	Cellular Component	Z disc	Interproscan
GO:0030240	Biological Process	skeletal muscle thin filament assembly	Interproscan
GO:0030241	Biological Process	skeletal muscle myosin thick filament assembly	Interproscan
GO:0030674	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031432	Molecular Function	titin binding	Interproscan
GO:0035995	Biological Process	detection of muscle stretch	Interproscan
GO:0048769	Biological Process	sarcomerogenesis	Interproscan
GO:0055003	Biological Process	cardiac myofibril assembly	Interproscan
GO:0055008	Biological Process	cardiac muscle tissue morphogenesis	Interproscan
GO:0060048	Biological Process	cardiac muscle contraction	Interproscan
GO:0070080	Molecular Function	titin Z domain binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-