Gene detail

Detailed information of HS20504 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS20504	N-MYRISTOYL TRANSFERASE	chr23	15244994	15250903	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS20504

GGAGACGTTTCCaTCGCCGCTCTAAACCAATGGCAGAAGGGGAGCTTTAAAGTCGTCGAGGGCACGCGGTGGCTCCTCACTTCCTGGTTGAAGATGGCGGATGAGAATGAGAGAGCACCGTTGCCGGAGAAAGAAGATGTAGAGGACCACGGACACTGCAGCGACTGTGAAAACGAAGAGCACCACTCTGACGATGGGTAAGAAGGCATGCTCAGCAGCAAAGCGGTGGAGAAAACGCCGCGTCCTTCCACCCGTTATCTAAGCGGGATCATACGACAGCGTCGGGGAGCTGTAGGGGGAGACAGCCATCGCTGGAGGTTGTCCCGTCCACTTGCCTTTACCCTATTGGTTAGAAACAGCCTTCGCCTAcCAGTTCCTTTGtCGTGATTGGCTGAGAGAGCGTCATGTCGCTCATGTGGGCGGGCTCTAGCAGGAGGTAGCTTACTCCAAGTAATGTTACGCTTGAAAGCCAGTCATTTAATAATATAATGTCGCTTGTGCAACTTGCAGACAAAGTCATATTTCTATTTAAATTAAGTTTACAGTGATGTGTATGATTTGCATGTATACATTGTTGGTTGCCTGTAACTGAAGCAATTCATGGCAACCCCAGTTGACATTTAGCAGGCTAGCATGCATGCTAGCATAGCTGTCAAACCCCTATTGTCTGTAAGTGGATCGGGGTGCAGCCTGTCGCCGATTTAAAAGTGCAACCTGCATGCTGTTGCACATGCAGGTCGATCACCTCGTCTGTTGGGCTGGCTTTGAGCCATGGGATTCAGGAGGGCTTTTAATTCCCTCTTTTAAATATGAAATATCATAAATCAGCCTAATGTCTGCTCTCCTATGGAAACAGACGTTGATTGAAACCTAGTGCTTTGACTTCTGTTCATGTTGACCAGAGCGCTGACCCACACGAACGGAGCATTGGCCTGAAAATATTAAGGCGTGTCCAGCTCCCCGGTATAAAGGCCACTTCTGCCATTGGAGAGGGACAACGTGTTGCTGCACGGTTTCTGTGTCTTCTTCAGAGCAATGTGACGCTACTTGTGACTaATCACGAGCCTCCATGAGCTGAGAGCATTCTGACCACAGAGGGGgTTTAATTTCCTGGGTTGCTTTGAACtgaattttttttttttttacgtgtggtgacCTGTTCAGTTTTTCATTAGGAAAAAAATGATAAAATAAAGGGCGATTTTTTTGCAACATAAAtAAATATATTTCAACCTAATCCACCGCTGCTGTGAGGGGAAAATGATGACCCTATTTATCAATTGAGCATATGTGAGCTTCACGCTCTTTTCAAGTAACACATGCAACTCCCCTGCACCCAACACACACAAACAAAGAGTGGTTCTGGCTGCTCTACTCTGTCGAAACAGAAGCCTGTGGAACAAACCATTGAATGTTTTGTTGTCCATTGTCCCAGTCACTCACTGACCtCTTGTAtGTACACACATGTAAACAAGCGCATATACCATATAGTCTTATTCCTGAGGTCATGTGATTCACCATCTGTGCTGGTGTTACAAATACAGGCCAGTGCTTTGCCTCTCTCTCTTGGACACAAGTGAGATTATCGTCTGTAAGTATGGAGTCTCTCTCAGGTCtGAGGATGGGATAGCTGTGTGGGGGTTTGTGTGTcCTCAGGTTTAAAATTTATCAGGAAATGGTGGTTTGTGACACAAGCTGTGGGAGGGGGTTGCAGGAACTACCAGTGTTTGCcGAGTTTACACTTTCCTTTATCCATTTCAGTCACATTTATCTTCTaCATTAGCTGATGCAgGTGATGGAGAGAGACAACTTTGACTTTGTTTCATTACTGAAATATGAAGGACTTTATTATCCAGGATTTaTAGCGCTGAAACAATCGGTCAATGCAGCGTTATTTGTATAGTTGTGTCAATATACTACTGATTATTTCTTTGTTTTTACaGAAATGGTTTAAAGATATTAACTTTGAAGTTTGATGTTAGGCCAAAACACATTTTGTACTGtTTCATACAAGAGTGTGTATAATGCCGTTTTAATCTTCCTATTGTGTGGTATAAACTATAAAGCATATTCCAGATAGACATTTGAGATGATATAATTTGACCAAGGCAGGGCTTTCCTCTGGGATAGGAGACTAATTTGCATGCCTTTTTATGTCTGTcCTTTCAGTGACAGGGGTCTGGGTGACGACACTGGTGCTaagaagaagaaaaagaagcagaaaaagaagaagaaaTCTGGTGCCACAGAAGCTGCTCAGGACCCTCTTGCCAAGGCATGACAATCCTTAATTTTGTGAAGTAACAATCAAAATCCAAGAGTCAGAGCGCCTGAAATTCAAAAGGAAAACAAAAATAGTTAAATTCAGGTCTGATTCGCCAACCTTTGGAGCTGGAGGTCTACTCCAAAGGGTTGCTCAGAGATGGTCAAATCACTCAGAAATCCTGAGACAGTTTCCTGCTGTGGACTGTGGCACTTTAGAAATCTGCATTTCTTGCTCACAGGGCGGCGCTGTGCTGATTAGACACGGCGTGCTTACATCCACACCATTGAATGTCTTCTGTACCTTGGCCCTCACACCAAATGAACTAGAAAATTATTAATTTGGTTAGGTTGATCCTTTTAACCCCgTTGATTTCTATCTGTATTTTGCAAACAGGTGAATTCATTGCCAGCTGATAAGCTACAGGAGATCCAAAAGGCCATTGAACTATTCTCTGTAGGCCAAGGCCCTGCCAAAACCATGGAGGAGGCAACTCGGAGGAGTTACCAGTTCTGGGACACCCAGCCTGTGCCCAAGCTAGGTATGACATTTGTCAGAGCCGTCAGTTGTACTTCGAGAAAAGTGaATGTAATTTATTGTAGGTCGCTGTGCTTATGTCAGACTCTGTTATGTTTTCCTTCAGGGGAGACCGTGACATCACACGGCTCCATTGAGCCGGACAAAGACAATATTCGTGAGGAGCCCTACAGCCTCCCGCAGGGCTTCAGCTGGGACACTctcgacctggggaacgctgctgtggtaagagtgtattcacacgcacacacacacacatGGCAGGAATGCACATGCACAAATTCAGCTTTTTAGtAACAATCTtCTGGACTTTATTTTGTGAAAAATAACTAGTtTTATATTTaTGTGCAAATGTAAATATATCGTTCATTCAGTTGAGGGATTTACTGATAACGCATTACTGTAATAAAGCTGAACTATAATGCTGAGACATACAAATGTTCCAGTTTATTTTACAGGAGAAAACAAATAAAGGTGTAGCTCCAATACACAAGCTTGCCTAATTTTCTCAAGTTATCTGCCATATTCTTAATACCAAGATGTTTAGATACCTGTATGAGCAATTCTATTTTTCATTCACACTGTGCACacCATGTGTATGATgTATGTGTATTGTTAGAAGTAAATtTACTAGAATTGATGCAGAACAGGGGAAGTTGACAGAGCTTTAGCGTGTATGAAATGAACAGGCACATATACACAGAGGCATATTGCTATACGAAGTGTCTAACGTCTGATTCTGTTTCCTGTAAAACCAGCTCAAGGAGCTTTATACCCTTCTCAACGAGAATTATGTTGAAGATGATGACAACATGTTCCGATTTGACTACTCCCCCGAGTTCCTCCTCTGGTATTTATTTTCAGAACTTATTTTCTTCCATTTTACACCTGGCAACGATGTTTATTTGAAATGCTAAAGACTAcactttctttatattacattacattacatgtcatttaTAATAATCATAAATCACATGGGTACATTTATTATATATAATCTGGATAAAaGTGATGCCAATACATTAATCTGTTGCATTCAATGTCTGACTTGTCTCTCTCTCTCTCTcAGGGCCCTGCGGCCCCCCGGCTGGTTGCCCCAGTGGCATTGTGGGGTGAGGGTGAACTCCAACCAGAAGCTGGTcGGCTTCATCAGCGCCATTCCTGCTTCCATCTTCATCTATGACATGTAAGTGAACACAACAATGCAGCGTCTAAGTATAATGGATTGAACCAAATGCATCACATGCTATGTGAAATCTACTGTACTGTTTTcTCACATTGCATCAATTCCACATGACGTTCACTCGGGTACACCCATACGAGCGAATACAtTTCAACTGTTCTGTATAACGTCTACTTTTATGAGCTTTTTATTAACTTTGTTGAAGTATTTAAATGTATGACAGGGCTGTTGAAGTGTACCTTAATGAAGGGTCCACTCGGTGTACATATTGTCGGCCTGGAAAATTGCCTTAAATTATTTGTGGGACTTGTTTTTTtAttTTAAATCCGAAGGTAAAAGGaCAATGCGTGATGTATTATTCATTTAATTGAATATGGCAaAGATGCATTTTTTTATTTCTCGTCATTGCAGAGTTGCTCACTTAATGAATTCTTTcCCCTGATGTTTAGAGAAAAGAAAATGGTCGAGATCAATTTCCTGTGTGTCCACAAGAAGCTTCGCTCCAAACGAGTTGCTCCGGTTCTCATAAGAGAAATCACCAGACGGGTCAACCTGCAGGGCATCTTCCAGGCCGTTTACACTGCCGGAGTGGTACTGCCCAAACCTGTGGGCACATGCAGGTGGGTCGGACAgAAATAGTTCTCCACATACTATATGCACGCAACCTTCTCTTTTCTTCTATATTTGAGGCATTATGTATTTACAAATCCAATTTCTTTGCCCAGGTACTGGCATCGCTCTTTGAACCCACGCAAACTAATCGAGGTGAAGTTCTCCCACCTGAGCCGGAACATGACAATGCAGCGCACCATGAAGTTGTACCGTCTGCCcGACGTGAGTAGCGCGCATATTTGACGAACACACATGGGCCACAAAGCCCCGCCACGCCTTTATCCTCCTCCCTTTGTTTCGCTCCTTCAGACTCCAAAGACTTCAGGTCTGCGGACGATGACCAAGAAGGATATCCCACTTGTcCATCGCCTGCTCCGGGAGTACCTGAGGCAGTTCAACCTgGTGCCCGCCATGAACCAGGAAGAGGTAGAACACTGGCTGCTACCCCGAGAGAATATCATCGACACTTTCCTGATGGAGGTAAAGAAACACACTTTTTTGCCAGAGACATTTTTATGTAATTATGTCTTAAACCATTTCTCTAGTCTGTTTTACGCCGATGTTTTCTACAAATTGATGTCGTTGTCTTGACAGAACGATGGCAAGGTAACGGATTTCCTGAGTTTCTACACACTGCCCTCTACCATTATGAACCACCCTCTGCACCGCAGTCTAAAAGCAGCGTACTCCTTCTACAACGTGCACACCACCATCCCTCTGCTCGACCTGATGTCTGACGCCCTCATCCTAGCCAAATCGGTGTGTTCCTCTTCAATCtgtgtgtgtgtgtgtgtgtgtgtTCTCTGTATTGGTAACTCTCGGCGAACTAATGCGCTTTTTTTCTCTCTatCTCCAGAAAGGGTTTGATGTCTTCAATGCACTGGATCTAATGGAAAACAAGACTTTCTTGGAGAAGCTTAAGTTCGGCATCGGTGATGGAAATTTACAGTATTATCTGTACAATTGGAAGTGTCCCAGCATGGGCTCCGAAAAGGTACATTTATAGTGGCAACATCACAACTTCACGGTATCTGCAGGTCTTGAAAAGTCTTTCATTGCCATATACTCTGGATATAATGATACATAATTCTAGACCCTAACCTCCACACTGGTTTTCCAAATCAACTTTCATCCCTTGGCTTGGTTTGACCATAAAATAAGTGTTATTGTACATTCTGTGTGGTCTTAAAATATCTTGTTTTTAATTTTGAACCATGCAAAAAGCTCCTATAACCTTACTTTTCCCCAAAAATATTTTAAAAACTGCTCCCTAATATGTCCTTTTCTTGCTCAGGTTGGGTTGGTACTGCAGGGAGACGTTTCCaTCGCCGCTCTAAACCAATGGCAGAAGGGGAGCTTTAAAGTCGTCGAGGGCACGCGGTGGCTCCTCACTTCCTGGTTGAAGATGGCGGATGAGAATGAGAGAGCACCGTTGCCGGAGAAAGAAGATGTAGAGGACCACGGACACTGCAGCGACTGTGAAAACGAAGAGCACCACTCTGACGATGGTGACAGGGGTCTGGGTGACGACACTGGTGCTaagaagaagaaaaagaagcagaaaaagaagaagaaaTCTGGTGCCACAGAAGCTGCTCAGGACCCTCTTGCCAAGGTGAATTCATTGCCAGCTGATAAGCTACAGGAGATCCAAAAGGCCATTGAACTATTCTCTGTAGGCCAAGGCCCTGCCAAAACCATGGAGGAGGCAACTCGGAGGAGTTACCAGTTCTGGGACACCCAGCCTGTGCCCAAGCTAGGGGAGACCGTGACATCACACGGCTCCATTGAGCCGGACAAAGACAATATTCGTGAGGAGCCCTACAGCCTCCCGCAGGGCTTCAGCTGGGACACTctcgacctggggaacgctgctgtgAACCAGCTCAAGGAGCTTTATACCCTTCTCAACGAGAATTATGTTGAAGATGATGACAACATGTTCCGATTTGACTACTCCCCCGAGTTCCTCCTCTGGGCCCTGCGGCCCCCCGGCTGGTTGCCCCAGTGGCATTGTGGGGTGAGGGTGAACTCCAACCAGAAGCTGGTcGGCTTCATCAGCGCCATTCCTGCTTCCATCTTCATCTATGACATAGAAAAGAAAATGGTCGAGATCAATTTCCTGTGTGTCCACAAGAAGCTTCGCTCCAAACGAGTTGCTCCGGTTCTCATAAGAGAAATCACCAGACGGGTCAACCTGCAGGGCATCTTCCAGGCCGTTTACACTGCCGGAGTGGTACTGCCCAAACCTGTGGGCACATGCAGGTACTGGCATCGCTCTTTGAACCCACGCAAACTAATCGAGGTGAAGTTCTCCCACCTGAGCCGGAACATGACAATGCAGCGCACCATGAAGTTGTACCGTCTGCCcGACACTCCAAAGACTTCAGGTCTGCGGACGATGACCAAGAAGGATATCCCACTTGTcCATCGCCTGCTCCGGGAGTACCTGAGGCAGTTCAACCTgGTGCCCGCCATGAACCAGGAAGAGGTAGAACACTGGCTGCTACCCCGAGAGAATATCATCGACACTTTCCTGATGGAGAACGATGGCAAGGTAACGGATTTCCTGAGTTTCTACACACTGCCCTCTACCATTATGAACCACCCTCTGCACCGCAGTCTAAAAGCAGCGTACTCCTTCTACAACGTGCACACCACCATCCCTCTGCTCGACCTGATGTCTGACGCCCTCATCCTAGCCAAATCGAAAGGGTTTGATGTCTTCAATGCACTGGATCTAATGGAAAACAAGACTTTCTTGGAGAAGCTTAAGTTCGGCATCGGTGATGGAAATTTACAGTATTATCTGTACAATTGGAAGTGTCCCAGCATGGGCTCCGAAAAGGTTGGGTTGGTACTGCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01233	NMT	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	Domain	Interproscan
PF02799	NMT_C	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000903	Family	Glycylpeptide N-tetradecanoyltransferase	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan
IPR022676	Domain	Glycylpeptide N-tetradecanoyltransferase, N-terminal	Interproscan
IPR022677	Domain	Glycylpeptide N-tetradecanoyltransferase, C-terminal	Interproscan
IPR022678	Conserved_site	Glycylpeptide N-tetradecanoyltransferase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11377	N-MYRISTOYL TRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004379	Molecular Function	glycylpeptide N-tetradecanoyltransferase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006499	Biological Process	N-terminal protein myristoylation	Interproscan
GO:0018008	Biological Process	N-terminal peptidyl-glycine N-myristoylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-