Gene detail

Detailed information of HS20162 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS20162	NUCLEOSIDE DIPHOSPHATE KINASE	chr23	8163404	8165411	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS20162

ATGGTCCTGCTGCAGCGCGGCGGCGTGAAGAGAATCCTCCAACACTTTTATTCCGGGAATCATGGAAACACCAAAAGTCTGCTGCCTGCTGCAGACGGAGCTGCGGGCCGCAGGAGAAACTCAAGTAAGTGACTGGATGTGTATCAACTGTCAGTCTGCACAGAtcttctcttctcttctcttcctcacattgtgccacttttctcttcCTCAATGGACTACATAACACTGTGACGTTTTCATTTTGAAACGTACCGATTAATCCCAAAACTTTCTCAGTGTTGAGCATGCAAAGATGACGTGCATGAAGATTTAAATGTTTGATGTTGAACATTATCAACACTTTCTTTGCGCCAAAAGGGGGATGTGCCCAAACAAATGCGCTTGCCAAACTCCTGGGCTCATGAACTTAGACTGGAGGGTCAGGGGGACACGATATGCTGGTGAAACGGTGACCTGAATGTCTGAAGATTTGGGGTCATAGTTTTTTATTGCGTGTTTTCGTATGTTCCTCCCGTGGCACAAAGACTCAAGGGAAAGCAGCAATGTAGCTACTCAACGATTCTTCCTGCTTTAGTGTTTGAAGCGCGATGCCCGCACACTGAGCTCCTCCTCGTGGCGGGTCACGTGTGTAATTGATTGCATGCAGTCGTTCATTGGCTCCTGTTGCAGCTGCGGTTCTGTGCGGAACAATTATTTTTTGTAAATACAACAATATCTAATGTGCCCATTTCGTGTTGCTCTCAGAGGGTACAGCTGTGTTTGGAAACCGAtgtgtgtgtatgtttgagtgtgtgtgtgcgtTGGATGTCCCCCTGCATGTTGCTGACTTTGAGTAAATATTTGTCCTCTTCCTTGTAGGCTTGCACTTTTTACTCCACTGTGTATTTGACTTACTTTGTAGAATTAGATTGTTAATAACCTCCAAAATACAAATCAACTATAAGCTGATGCATTGTTTAAGATGAAGCTATACCCCAAAGCATATCAAATAGCTGAAATGATATTCGCAAAAGGTACACATGAATGCTTAAAACTTAGAATATATAGTTTTCTAGATTTGGCCTTAGTGCTTTTAAGTATATTGCATTGCCAATATGTATATGTCGTGTTTTTACATTAAAGTGTTCCTACTTTGTCTGGTGTCCCAGCAGCTGTCCCAGACGTAAGGGAGCGGACTCTTATTGCTGTAAAGCCAGATGGAGTTCAGCGTCGTCTTGTCGGACAGATCATGCAGCGGTTTGAGCAGCGCGGCTTTAAGCTGGTTGGACTGAAAATGTTGCAGGTAAAGAAGTCTGGAATAAATGTTTGGTTCTGTTAGGGTGGTGTTTTCTCCGTTTAATTTCTAACTTTCTCTGTCGGGAAGGTGTCTGATGATCTTCTGTCTCAGCACTACTGTGAACTGAGGACTAAACCCTTCTACCCCAGCCTGCTGCATTACATGACCTCAGGCCCTGTTGTTGCCATGGTGAGGGTGTCTCTATACTCCTGTATTGAATTATTCCTAAAAACATTTTTTATGAATGATAGAATATCATATATATCAAAATACACAGTATTTCTGCTTCCAATTGGTCCATGTCTCGAATATCCTGTTTTTGTGTTTGCTTATGTGGGTTCTTTTATTTTCATCGAGGTGTGGGAAGGGCACAAGGTAGTCCAGACGTCACGGACAATGGTGGGCCATACGAACCCAGCGGAGGCCCTGGCAGGCACAGTCAGAGGAGATTTCAGCTTTCACGTCAGCAGGTAACATGCCATTTGATCTCATTTCGGGTAAAGTAAGTTTCAGGGTTGAACGACAACCTCGTGACACCGCCACCTTCTGGATATTGCATGTGCTTTTTCTGTGTCTGAGGTAAAACATGAATGTGTGTCGGTCATTTAAAGGAATGTGGTTCATGCCAGTGATTCACCGGAAGGGGCACAGAGGGAGATCCAGCTGTGGTTTCAGAGAAAGGAGCTCCTGAACTGGGACTGCTGTGACCAGACCATCACCTGTGAGCTGATGGTCCTGCTGCAGCGCGGCGGCGTGAAGAGAATCCTCCAACACTTTTATTCCGGGAATCATGGAAACACCAAAAGTCTGCTGCCTGCTGCAGACGGAGCTGCGGGCCGCAGGAGAAACTCAACAGCTGTCCCAGACGTAAGGGAGCGGACTCTTATTGCTGTAAAGCCAGATGGAGTTCAGCGTCGTCTTGTCGGACAGATCATGCAGCGGTTTGAGCAGCGCGGCTTTAAGCTGGTTGGACTGAAAATGTTGCAGGTGTCTGATGATCTTCTGTCTCAGCACTACTGTGAACTGAGGACTAAACCCTTCTACCCCAGCCTGCTGCATTACATGACCTCAGGCCCTGTTGTTGCCATGGTGTGGGAAGGGCACAAGGTAGTCCAGACGTCACGGACAATGGTGGGCCATACGAACCCAGCGGAGGCCCTGGCAGGCACAGTCAGAGGAGATTTCAGCTTTCACGTCAGCAGGAATGTGGTTCATGCCAGTGATTCACCGGAAGGGGCACAGAGGGAGATCCAGCTGTGGTTTCAGAGAAAGGAGCTCCTGAACTGGGACTGCTGTGACCAGACCATCACCTGTGAGCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00334	NDK	Nucleoside diphosphate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001564	Family	Nucleoside diphosphate kinase	Interproscan
IPR023005	Active_site	Nucleoside diphosphate kinase, active site	Interproscan
IPR034907	Domain	Nucleoside diphosphate kinase-like domain	Interproscan
IPR036850	Homologous_superfamily	Nucleoside diphosphate kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004550	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0006183	Biological Process	GTP biosynthetic process	Interproscan
GO:0006228	Biological Process	UTP biosynthetic process	Interproscan
GO:0006241	Biological Process	CTP biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-