Detailed information of HS20073 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS20073CYTOSINE-SPECIFIC METHYLTRANSFERASEchr2368231726844528+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF06464DMAP_bindingDMAP1-binding DomainDomainInterproscan
PF12047DNMT1-RFDCytosine specific DNA methyltransferase replication foci domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR010506DomainDMAP1-binding domainInterproscan
IPR017198FamilyDNA (cytosine-5)-methyltransferase 1-likeInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan
IPR022702DomainDNA (cytosine-5)-methyltransferase 1, replication foci domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR031303Conserved_siteDNA methylase, C-5 cytosine-specific, conserved siteInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR050390FamilyDNA Cytosine-5 MethyltransferaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10629CYTOSINE-SPECIFIC METHYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003886Molecular FunctionDNA (cytosine-5-)-methyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006346Biological ProcessDNA methylation-dependent constitutive heterochromatin formationInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0010424Biological Processobsolete DNA methylation on cytosine within a CG sequenceInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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