Detailed information of HS19832 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS19832ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1chr2314176071449363-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF16600Caskin1-CIDCaskin1 CASK-interaction domainFamilyInterproscan
PF16632Caskin-tailC-terminal region of CaskinDisorderedInterproscan
PF16907Caskin-Pro-richProline rich region of Caskin proteinsFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR032117DomainCaskin, C-terminalInterproscan
IPR032232DomainCaskin-1, CASK-interaction domainInterproscan
IPR033635FamilyAnkyrin repeat and SAM domain-containing protein 1/CaskinInterproscan
IPR035497DomainCaskin1/2, SAM repeat 1Interproscan
IPR035498DomainCaskin1/2, SAM repeat 2Interproscan
IPR035499DomainCaskin2, SH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24174ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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