Detailed information of HS19539 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS19539TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5chr221487425114881024+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00020TNFR_c6TNFR/NGFR cysteine-rich regionDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001368DomainTNFR/NGFR cysteine-rich regionInterproscan
IPR008063FamilyFas receptorInterproscan
IPR052135FamilyTumor Necrosis Factor Receptor Superfamily Member 5Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR46875TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002768Biological Processimmune response-regulating cell surface receptor signaling pathwayInterproscan
GO:0003823Molecular Functionantigen bindingInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006915Biological Processapoptotic processInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0023035Biological ProcessCD40 signaling pathwayInterproscan
GO:0030890Biological Processpositive regulation of B cell proliferationInterproscan
GO:0032735Biological Processpositive regulation of interleukin-12 productionInterproscan
GO:0034341Biological Processresponse to type II interferonInterproscan
GO:0035631Cellular ComponentCD40 receptor complexInterproscan
GO:0035666Biological ProcessTRIF-dependent toll-like receptor signaling pathwayInterproscan
GO:0042113Biological ProcessB cell activationInterproscan
GO:0042531Biological Processpositive regulation of tyrosine phosphorylation of STAT proteinInterproscan
GO:0042615Molecular FunctionCD154 receptor bindingInterproscan
GO:0042832Biological Processdefense response to protozoanInterproscan
GO:0043123Biological Processpositive regulation of canonical NF-kappaB signal transductionInterproscan
GO:0043536Biological Processpositive regulation of blood vessel endothelial cell migrationInterproscan
GO:0045766Biological Processpositive regulation of angiogenesisInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0048304Biological Processpositive regulation of isotype switching to IgG isotypesInterproscan
GO:0051092Biological Processpositive regulation of NF-kappaB transcription factor activityInterproscan
GO:0051607Biological Processdefense response to virusInterproscan
GO:0071347Biological Processcellular response to interleukin-1Interproscan
GO:0071356Biological Processcellular response to tumor necrosis factorInterproscan
GO:2000353Biological Processpositive regulation of endothelial cell apoptotic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP