Gene detail

Detailed information of HS19517 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS19517	TYROSINE-PROTEIN KINASE	chr22	14591840	14595229	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS19517

ATGTCTTCCGGATCCCAGCaAGACGTCAGCTGCCAGCCCGAAGATACGCTCTGTGGTGAGTGTTTCCATTAGCAGAGGTGGAATGTGGCCACCAGCAGGTCTGCCCAGTCCAGGCCTCATCCACCAGATCCACAGAACAACATGTCGTGACTTCTGGGTGACGGTGTTTCCTCCGTCCCGTTGCCAGTGGTCCGTGTCTACGAGCAGGAGGTGATTGTTGTGCCCGTGTTCCTGCTGGCCATCTTCCTGGTCACTCTGGTCTTCGTCCTCCTGCTGCGCTACTGTCCAGAGAAAGTCGACCGCCTCCGTCTGCAGGCCTCGAAGCCGGCCTCCAGGAGAGTGCTGCATGGCATCGATGGTAAGCCACTGGGCACCAGTTTGTTTGTTGATTGAGCTTAAATACATGAAATCAGATCACACAATCACAACACCGACATGTAATCAAACAAGCTCATTCCATATGTATATTGTGTATATTATTTTTTTCTCCAAGTGATATAGTTACATTATAATGAATTGAAAGTGATTTTATTTCCTACATATTTTTGTTTATTTGGCTAACTTTGTCAACGGCTAAATTTGACTTTTTAGGTGGTACCTTTGGGGCATACACATTTTAATTGTTATATTTTTTTCTGATCACTTTTCCATATTCTTAGAATCAATGTTTTCAAACACAATGTAAATCAGTGATGGTGTTATTGTGCCTTCATCTGTAAACATCAAACTGCAGAGCAGCATTTCTTATTTTTTATAAAGCAAAGAGATGCTaAAGATCAAAAGTTCTATTAACCTACTTTTCATGTAAATCTTTGCACATGTCGATTGACGATGATTCCCtGTCTCCCTCTTTGTCTCCCCTTAACTCTCCACCCGCAGCTCCACCAGGTATCAATGTCCTGGAGCATGAGAGCATCGCTCTGGGCACGTCCAGTACCTACTCCACCTTCAACCCCCCGAGCATGTACCCTCCCAGAGCCTCCTCCAGGAGCGTGGACACACTCTCtGTCCCACTAAACGtcccgcccagtctcctgcccagtctcctgcccagtctcccgcccagtctcccgccGCAGCCCTTGAAGCCCAATTTCACTGCCATCCTCCAGCCCAGGGAGTTGCCCCGTCAGAGGCTGCCTGAGTCCTTCAAACTGGTCACCCCTCTGCCTGTCCCCTTCTCCCTGCGCTCCGACACCGCCGTGTCCCTCTACAGGGCCCGGATGGAAAACAGGAATGTGGTGCTGCGAGTCCTAAAAGGTGAGATGGTTAAAtATTCATTTAACGGACGCTCCTAATCGTCTCATTCGATTTCCAGGACATGGTTCCTGTAACTGAAGGTTCCTCTCTTCCTCTcTTCCTCTCGCCCTTTACAGACACTGCTGATGCCTCAGAAAGACACAGCTTCCTAGAATTTGCgTCCTTTCTGGCCCAGCTGGGGCCTCATCCCTTCCTGCCAGAGCTCCTCGGGGTGGTCTCACTCCGAGCTCCTCTGGTTACAGTGGTGGAAGAGCTGGAGAACAGAGACTTGCTCAGCTTCCTGTGGCGATGCCGAGAGGTATGATGTTCCTGCTGCCACGTGTGTTCCCTCACTTCAATCAAACCATACACGGTATGCATTTAATGCGAAAACAATAAGAAACACACATTTAAACTTTGTTTTCTCATTTCAGGAGCATGTGGATCCTCCATGTGAGATGACCGAGAGACGAATCTTCACCATGGCCAAGCAGGTGGCCTCAGCACTGGTCAGTTTGCTAACACACATATTTTCACTGATGGGAATGTCATCGTTTTTTATTTTAGCATTTTCCACAAAACTACAAATTTGAACCGCCACATGGAGAATCAGGAGATCACTCATGATTCATCCTGTGGGAACCATGCATCCAAACAGTGGTAATCCACCCAATATGATTGATGAAGTGGTGGATGAACCCACCGACAGACCAAGAGACAACATGGCCATCTCAAGAGcCTCTAGCATGGCTAAACATATAAATCCTACTCAGTCGGTCttacatgttgaagtgtccttgagcaagacactgaacccccagttgctccccggctgcttcactgcagcctcctgctcctcaataactcaggatgggtccaaatgcaaagaacaatttccccacagggatcaataagtgtaccttttcttttctattttcaaaagGCTACCTAAAATTAACCTCTTTTAATCCACTAACTTTTATAATATCTCTCCATGTTTTAAATCACTGGATTCGTCCCAAATACTATTTAAACAGATGCTCTAAAAAAGCTTCTGAGGTTTCAGGTAGTACATGTTTACTGAATGTCAACAGTGAGGACTGAACTGAAATAAGCGGCGCAGgtgtgtgtgtgtgtgtgtgtgtTTAATCCTGAGATGCTCAATGTCTTATTGCGTCATCAGGAGTTCCTTCACAACAAAGACCTCATCCACGGGAACATTCGTGCCtGCAGCGTACTGGTCACCAAGGAGTCCACCGCCAAGCTGTGGGGCCTCCATGGGGTCTACACCAGGAAGAACCAGGAGGCCACAAAGATGGAGGATCCGGGTATGAAGAAATGGCAGGCACCAGAGCTGCTGGTCAAGAAACCCGCCAGTCAGAGCAGCGACATGTGAGTTCATTAGTATAATGCAGAGTTTATTATCAAGAGCGTTATTGAATAGAAGATTGTGACATCATGTGTCCCGTGTGCTCCTCTCTAGTTGGTCATTGGGCATCTTACTCTATGAAATGGCAACAATGGGTAAGTTGGATTTGAACTCTTGGGTCATAAATGATGGATAAGACGAAAACAATtTCTCTTAAATAGCGTAGCTCTTTTTTTTTAGCAATTGCAAACCCATAAACAGGACAATCTTATTTAAATATAATATTTTAATAATATTTCTGGAATGCGTAATGTTTTTTTGTGTGCCAAAAAACACACCAATGAACAGTGCTCCTCTGACAATGTAAAAGTACTTATAGTTTGATGCCATCCCGGCCCTCCTACCCACAACAGGTGAAGCTCCGTTTGCAGAAATCTCCGTAAATGAGCTGCTGCAGTTTCATCAACGAGGGAAAAGTCTGAGGAAACCTTCAAACTGTTCCAACGCGCTGTGAGTAGCCACaGCATGAACCTACAACACCACCTGGAGTCCTGcGGTTCGCTCTCTGACTCATGTGCTGTGACTCTCTCAGGTACTCTGTCATCAAGGGTTGCTGCCAGTGGAAAGATCAAGATCGACCCTCTCTGGAGGAGGTGAGCCGCAAGGTCAAcTCAGCAGAGAAGAACGCCTCCGACAAAGTCCTCAAGGTGTCGGGGACCGTCAACATCGAGAAGTACCTGCAGGAGGCCGGATACGGGGATAGCAACAGCTACACGGTTTTCATGTCTTCCGGATCCCAGCaAGACGTCAGCTGCCAGCCCGAAGATACGCTCTGTGTGGTCCGTGTCTACGAGCAGGAGGTGATTGTTGTGCCCGTGTTCCTGCTGGCCATCTTCCTGGTCACTCTGGTCTTCGTCCTCCTGCTGCGCTACTGTCCAGAGAAAGTCGACCGCCTCCGTCTGCAGGCCTCGAAGCCGGCCTCCAGGAGAGTGCTGCATGGCATCGATGCTCCACCAGGTATCAATGTCCTGGAGCATGAGAGCATCGCTCTGGGCACGTCCAGTACCTACTCCACCTTCAACCCCCCGAGCATGTACCCTCCCAGAGCCTCCTCCAGGAGCGTGGACACACTCTCtGTCCCACTAAACGtcccgcccagtctcctgcccagtctcctgcccagtctcccgcccagtctcccgccGCAGCCCTTGAAGCCCAATTTCACTGCCATCCTCCAGCCCAGGGAGTTGCCCCGTCAGAGGCTGCCTGAGTCCTTCAAACTGGTCACCCCTCTGCCTGTCCCCTTCTCCCTGCGCTCCGACACCGCCGTGTCCCTCTACAGGGCCCGGATGGAAAACAGGAATGTGGTGCTGCGAGTCCTAAAAGACACTGCTGATGCCTCAGAAAGACACAGCTTCCTAGAATTTGCgTCCTTTCTGGCCCAGCTGGGGCCTCATCCCTTCCTGCCAGAGCTCCTCGGGGTGGTCTCACTCCGAGCTCCTCTGGTTACAGTGGTGGAAGAGCTGGAGAACAGAGACTTGCTCAGCTTCCTGTGGCGATGCCGAGAGGAGCATGTGGATCCTCCATGTGAGATGACCGAGAGACGAATCTTCACCATGGCCAAGCAGGTGGCCTCAGCACTGGAGTTCCTTCACAACAAAGACCTCATCCACGGGAACATTCGTGCCtGCAGCGTACTGGTCACCAAGGAGTCCACCGCCAAGCTGTGGGGCCTCCATGGGGTCTACACCAGGAAGAACCAGGAGGCCACAAAGATGGAGGATCCGGGTATGAAGAAATGGCAGGCACCAGAGCTGCTGGTCAAGAAACCCGCCAGTCAGAGCAGCGACATTTGGTCATTGGGCATCTTACTCTATGAAATGGCAACAATGGGTGAAGCTCCGTTTGCAGAAATCTCCGTAAATGAGCTGCTGCAGTTTCATCAACGAGGGAAAAGTCTGAGGAAACCTTCAAACTGTTCCAACGCGCTGTACTCTGTCATCAAGGGTTGCTGCCAGTGGAAAGATCAAGATCGACCCTCTCTGGAGGAGGTGAGCCGCAAGGTCAAcTCAGCAGAGAAGAACGCCTCCGACAAAGTCCTCAAGGTGTCGGGGACCGTCAACATCGAGAAGTACCTGCAGGAGGCCGGATACGGGGATAGCAACAGCTACACGGTTTTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0006935	Biological Process	chemotaxis	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0043304	Biological Process	regulation of mast cell degranulation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-