Gene detail

Detailed information of HS19509 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS19509	SOLUTE CARRIER FAMILY 2	chr22	14468289	14473382	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS19509

ATGGTGGGCTCCTTCTCTGTTGGAGTGTTGGTCACCAAGTTTGGCCGGTGAGAACATCAGGAATAGACAAATCAGTCCTTTCAGGATCACCAGTACATTTTAACAATGTGTGACTAATATCAGCAACAAGTAAGAACAGCTTCTTTTTTCCTTTAATTATTTAATTGGCAAAATCTGTattcagtttatttgtatagcccaatttcacaaattacaaatttgtctcaggtactttacaatctgtacacatgacatcctaacacaaaacctaagcatcggatcaaggaactccagaataacccatgaggggaaaaagggaagaaaccttcaggagagcaacagaggaggatccctctccaggatggacgattgcaatagatataatgtgtacagaggacagatttaggtttaaatgcattcaatagatgtgacagtgtatgaatagttcatagtaggcatattccacgatggagacctcacgatccatcaggcagatggcggtagagagagagtgaagcggagtctcagcagtgggcggagtctcagcaggacaggctggcgtagtcgggtaaattccacggcccagacctcagtgatgatccatcaggcgaatgggatctgccgtctcatagggtcattgttatagggcgtaaatcattaccgTCATTCATTGAGGTAGAATGGCAAACGttcagactttcaaatttgagaatttcctgcttttttgtgaaatctgatagcaaattaaatatttttggttttcgactgttggttcgagaaaaaaaAGTCATAAGAATAAGAGCTCAATTGGGATTTTGTCATTAtTTTTTATTTGAGAAGATTGTAAAAAGCAGATTAATTAGTAATAAAACTAATAATTTCCTGCAGCCCTCATTTCCTTATACAGTACATACTATTTAGACATGCCTTTCTGTTTtcttttattattattttattgaaagtatgcatcaattcaatatttgcacatgtctttcagacaattaataccacatgtaaagatgatgtccatctcatctatacatatctatagaaaaaaaatgcaaaacataggacaaataacaaaaaagaatacagaacgaaacagaataaaacaatttaaaaataacttctaagcaaaggggtagtcagacatacactatgagtatactttactcactccttgtcctttctccacagcctctcttctgggcgtaagtccatgatgtatcaatgtctggctttatcaatgtcctggggAGTcTcATgGGATTGTCGGCTCTGTGTGGCTCTTTCGAGATGGTCATTAtatcgattggcttgatcatcgggtgttccatgggattgtaatctgtgtaaaactcttcaagatgtgtcgtgttgattgctcccggtgcagcttgatcatgggtgttctgcggtctctgcaacacccagaggctgacccccatacgtcagAGATCTCTCCCACGGCTGTCCGGGGAGCCTTCGGCACGCTGCACCAGCTGGGTGTCGTTATTGGCATCTTGGTGTCACAGGTATGATGCTGAGATAATACAGCTGTGATTATATTATTGATGCTTTTTATATTCCATTGTGCAAAAGCTGTGGATTCCTGCAGAATAATGTGGATAAAaGATATTAGATAATAATTGAATATCCATCAAAATCTAAATCTAAACATTGCAACGCTCTTGTACAAGAGGCTACTTTCACCTCAGCAAATCTTTTTGGACAACTTTCCGTCATCAGATTGGTATCAGCGTCTATTAATATAAAGTCTGTTGATCAGTCGTTTGACCTaCAGATCATAAGTAGAAAAAACTAAATTATCGTCCCTAATACCATATTTACTCTCAGTGGATACAGAAATGTAAAAGAATAATGTATCTGACCATAAATGCAAAACATATACCATTTAAGCATCATTTCAGGATTTCGTGCTAGCAAATTGAACATTTCATTGTAACCAATCAAATGGAAATAAATTAGTTTTTTTACTTTTGCAAACGTTTCAACCTCATTTTTTTAAAGCACAATGTAGTCAAATCTCTTTCCAGTTGCATGACCGATCAATAGACTGCAAATAAGGAAACTAGGGACAGATAAATACAAGATAACTGAACTCGATTGGTGAGGAGAACAAAGCATGGTGCACTCAAGGCGAGCTCTGCAACTGGTTTCAGTTTGATCCAACTGAAACTCACCTCACACGAGTCCATCAGAAGTCTTCCCTTCCCTATCTATTGGTTTTTAGATCTTTGGTCTCGAGTTTCTTCTGGGCTCGGACACTCTGTGGCCCCTGCTGCTGGCTCTCACCATCCTGCCGGCCATCCTGCAGTGCATCCTGCTGCCCTTCTGCGCTGAAAGCCCTCGCTACCTGCTCATCGTCCTCAACAAGGAAGAGGAGGCAAGAAAAGGTACGTTATGAGACAACAAGATGGCATCATTAGGTTTTAATGAGACTGCACCTGTATTTTTaATGATCTTGctGAGTGAAGAGTGGCCTTGTGATTTATTAAAGTTTGACCACATGATGTTCCAAGACCGTTACAGGATGTCCTTCCATCCTTTTTGCACAATAATGTTCCTGCTTGCTCTCCATTCATCCATCCCTTCTcCTCCCTGTAGCGCTGGTGCGTCTGCGCGGCTGTGAGGACGTGAGCGATGATATTCAGGAGATGAAGGAAGAAGGGATGAAGATGGCCTCGGAGAAGAAAGTGTCCATCCTCGAACTCTTCCGCTCCCCAAACTACCGTCAACCGATCATCATCGCTATAATCCTCCAGCTCTCTCAGCAGCTGTCTGGCATCAACGCTGTGAGTAAACAGAATGGAGCCGAGTGTCAGTGATATGCTCATCAAGTGtcagttcatgtcatctcattcattcatCTTCAATGGAGCATTCACTGAAATGTAAATGTGTATGACAAACACATGACGAGAGATGCTCCTCGGCTCCAGGCAATGTTAGATTGAGCAGAATAATGTAATCCACTGAGGGTGGACGAAGGGGCCAATACAATGGGATTTGATAGGTATTTAGTTGATAAGGTCATTTCACCAGGCTGACTTAACGTGTTAGAGTTACCTCGTCTGACCTGACAATCACAGTCAAGCTGCGGCTAGAGGCCGCAACATTGATTGAACCGACAGATATATTAACACTCGTGACCGATCTCCCACCACCCGAAACCTTCTGTCAGGTTGATGTTGACAGAGACCTCCgagagtgaatattggacttgcattgcgaggtggatattaacacagataaaataaatgctgctctgcgtcttctggatCAACTGCTTTCCAACACGtgagctgatcaactttaacccttgtgttgccttcgggtcattttgacccgattcaatatttaaccctcctgtcgccttcgggtcaatttgacccgattcaatgtttaatgtcggtgttctttcgggagtcaacaaacaaacataaagtacctcacacttaaacttggaaaacaatattaattctaataattttctggagattttaatagctggggtcatattgacctcaagggtaaaatatgttagtaaatataaaggtaacaggagggttaaacattgaatcgggtcaaattgacccgaaggcaacacaagggttaaTAAGTGGTCACAAGTGTTTAAAGCTTGTTGCTCTGCAATAAATGGGCAACAAATAAATGAATGCAGGTTTGATGTAATATAATTTTAAAGAATACACTAATTATATTCACTCAAATAACTAGTTGCTCATTTATACGtttttttattttatttaaaatttatttaaccaggaaatgcctcatcccctttaaaagagagtcctggccaagacagcagcagtagcacgttacacacattttaagacaatacaacataaaacagtgacagacaatataaaaagataaaaaataaaatgaaaagaaagatctttttttttttagatcacagcatcattaaaaccaaaactaagactcaagtcatcataacccagttcacacaggtgcacatacctcagtcaaagaaaccttcggcaaccagctgaacctacctccaactcttttcatccatttttaaaaacacctgaagagatcggttcccgtagacccagatcagtcATAATAATGTTCCTCTCCCTGCAGGTGTTTTACTACTCTACAGGTATATTTGACCAGGCTGGTGTTTCTGAACCCATCTACGCCACCATAGGAGCCGGAGTCGTCAACACTGTGTTTACTGTTGTCTCTGTAAGTTTACGACGACACAaTTGGTGTCTCAATACAAGCAATGATTTATATTTATTGGATTATTAATGACTATTGGTCTTCTTTTGACCCCAGCTCTTCCTGATTGAACGGGCGGGCCGGAGGACGTTGCACCTGATTGGTCTGGGTGGAATGGCTGTGTTTGCCCTCATCATGACGATCTCCCTGTCTTTGGTGGTGAGTGATGTTTCTCCTGTGAGCTTACAGATaGAAGAAAGAGCCCTGATTGCTCCCGCATTACATATTGCCCTAACTCTTTATTTCTCTCTCTGAGCAGAAGACAAACCAGTCTCTCAGCTACCTGGCCATTGTGGCCGTGTTTGGCTTTGTCGCCAGTTTTGAGATGGGTCCGGGTCCGATCCCCTGGTTCATCGTGGCTGAGCTCTTCTCCCAGGGGCCCCGACCTGCTGCCATGGCCATCTCTGGTTTCTCCAACTGGACCGCCAACTTCCTGGTGGGGCTGACCTTCCCTAAACTCGAGGTATGGGCAACATTTACTTCACTaAAGTCTTCAGCCGTGCGAGCAGTATTGTCTTGTACTAATTGACACCTCTCTCTCTCTTCTTCTCTCAGGAACTGTGTGGTCCGTACGtcttcatcatcttcatgatcttcctcatcctgttcttcatcttcacctTCCTGAAAGTGCCCGAGACCAGAGGAAGGACCTTTGACGATATTGCTCAGGGATTCGCTTCCAGTGCAGGGAAATCCTCCATGGAGTCTGAGGCGATGCACGCTGGCCTCACAGAGGGCAAAGACGCGGCCCCCGTGTCTCCCACAGACAAGGTTCCCATGGTGAATCTTTCTATGGTGGGCTCCTTCTCTGTTGGAGTGTTGGTCACCAAGTTTGGCCGgcgtaagtccatgatctttatcaatgtcctggggAGTcTcATgGGATTGTCGGCTCTGTGTGGCTCTTTCGAGATGGTCATTAtatcgatcttgatcatgggtgttctgcggtctctgcaacacccagaggctgacccccatacgtcagAGATCTCTCCCACGGCTGTCCGGGGAGCCTTCGGCACGCTGCACCAGCTGGGTGTCGTTATTGGCATCTTGGTGTCACAGATCTTTGGTCTCGAGTTTCTTCTGGGCTCGGACACTCTGTGGCCCCTGCTGCTGGCTCTCACCATCCTGCCGGCCATCCTGCAGTGCATCCTGCTGCCCTTCTGCGCTGAAAGCCCTCGCTACCTGCTCATCGTCCTCAACAAGGAAGAGGAGGCAAGAAAAGCGCTGGTGCGTCTGCGCGGCTGTGAGGACGTGAGCGATGATATTCAGGAGATGAAGGAAGAAGGGATGAAGATGGCCTCGGAGAAGAAAGTGTCCATCCTCGAACTCTTCCGCTCCCCAAACTACCGTCAACCGATCATCATCGCTATAATCCTCCAGCTCTCTCAGCAGCTGTCTGGCATCAACGCTGTGTTTTACTACTCTACAGGTATATTTGACCAGGCTGGTGTTTCTGAACCCATCTACGCCACCATAGGAGCCGGAGTCGTCAACACTGTGTTTACTGTTGTCTCTCTCTTCCTGATTGAACGGGCGGGCCGGAGGACGTTGCACCTGATTGGTCTGGGTGGAATGGCTGTGTTTGCCCTCATCATGACGATCTCCCTGTCTTTGGTGAAGACAAACCAGTCTCTCAGCTACCTGGCCATTGTGGCCGTGTTTGGCTTTGTCGCCAGTTTTGAGATGGGTCCGGGTCCGATCCCCTGGTTCATCGTGGCTGAGCTCTTCTCCCAGGGGCCCCGACCTGCTGCCATGGCCATCTCTGGTTTCTCCAACTGGACCGCCAACTTCCTGGTGGGGCTGACCTTCCCTAAACTCGAGGAACTGTGTGGTCCGTACGtcttcatcatcttcatgatcttcctcatcctgttcttcatcttcacctTCCTGAAAGTGCCCGAGACCAGAGGAAGGACCTTTGACGATATTGCTCAGGGATTCGCTTCCAGTGCAGGGAAATCCTCCATGGAGTCTGAGGCGATGCACGCTGGCCTCACAGAGGGCAAAGACGCGGCCCCCGTGTCTCCCACAGACAAGGTTCCCATGGTGAATCTTTCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003663	Family	Sugar/inositol transporter	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR045263	Family	Glucose transporter GLUT	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23503	SOLUTE CARRIER FAMILY 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0015149	Molecular Function	hexose transmembrane transporter activity	Interproscan
GO:0015749	Biological Process	monosaccharide transmembrane transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0046323	Biological Process	D-glucose import	Interproscan
GO:0055056	Molecular Function	D-glucose transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0070837	Biological Process	dehydroascorbic acid transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-