| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| HS19378 | NIBRIN-RELATED | chr22 | 12687480 | 12697660 | - |
| CDS | |||||
| HS19378 | |||||
| Transcript |
| HS19378 |
| Protein |
| HS19378 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00498 | FHA | FHA domain | Family | Interproscan |
| PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | Family | Interproscan |
| PF08599 | Nbs1_C | DNA damage repair protein Nbs1 | Family | Interproscan |
| PF16508 | NIBRIN_BRCT_II | Second BRCT domain on Nijmegen syndrome breakage protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000253 | Domain | Forkhead-associated (FHA) domain | Interproscan |
| IPR001357 | Domain | BRCT domain | Interproscan |
| IPR008984 | Homologous_superfamily | SMAD/FHA domain superfamily | Interproscan |
| IPR013908 | Domain | Nibrin, C-terminal | Interproscan |
| IPR016592 | Family | Nibrin | Interproscan |
| IPR032429 | Domain | Nibrin, second BRCT domain | Interproscan |
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR040227 | Family | Nibrin-related | Interproscan |
| IPR043014 | Homologous_superfamily | Nibrin, second BRCT domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12162 | NIBRIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000723 | Biological Process | telomere maintenance | Interproscan |
| GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006302 | Biological Process | double-strand break repair | Interproscan |
| GO:0006974 | Biological Process | DNA damage response | Interproscan |
| GO:0007093 | Biological Process | mitotic cell cycle checkpoint signaling | Interproscan |
| GO:0007095 | Biological Process | mitotic G2 DNA damage checkpoint signaling | Interproscan |
| GO:0030870 | Cellular Component | Mre11 complex | Interproscan |
| GO:0032508 | Biological Process | DNA duplex unwinding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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