Detailed information of HS18893 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS18893AUTOPHAGY PROTEIN 5chr2224095542418467+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04106ATG5_UblBAutophagy protein ATG5, UblB domainDomainInterproscan
PF20637ATG5_HBRAutophagy protein ATG5, alpha-helical bundle regionDomainInterproscan
PF20638ATG5_UblAAutophagy protein ATG5, UblA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007239FamilyAutophagy-related protein 5Interproscan
IPR042526Homologous_superfamilyAutophagy protein Atg5, helix rich domainInterproscan
IPR042527Homologous_superfamilyAutophagy protein Atg5, UblA domain superfamilyInterproscan
IPR048318DomainAutophagy protein ATG5, UblB domainInterproscan
IPR048939DomainAutophagy protein ATG5, UblA domainInterproscan
IPR048940DomainAutophagy protein ATG5, alpha-helical bundle regionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13040AUTOPHAGY PROTEIN 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006501Biological ProcessC-terminal protein lipidationInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0019776Molecular FunctionAtg8-family ligase activityInterproscan
GO:0034045Cellular Componentphagophore assembly site membraneInterproscan
GO:0034274Cellular ComponentAtg12-Atg5-Atg16 complexInterproscan
GO:0044804Biological ProcessnucleophagyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP