Gene detail

Detailed information of HS18826 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS18826	PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4	chr22	818273	821467	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS18826

ATGCTCCGTCCCGATTGGTCCGTCTGTGTGGGAGGGGCGGGGCTACGGGTTGACGCTGTGGTTGCGCTCGTCAGAGAACATCGCTCACCTGGCGGAGAGCGCGCTGCGGTTCCTGGAGCTGGTCCAGGAGAACAACGTGAACGCGGAGAGCGAGCCGAGCGGAGAGGACCCGGAGGAGGCGCTGCAccagaaggccaacgactcagctgctgtccgcacgcggtgaccttgaccTCAACGACAAGCACGACTGGCACCTCCGGGGGGCCTTCTTCGACAGCATCGTGGGTGAGGACCGCAGGGGCCGgtgctctgcctctctgtgctctagctctctgtgctctagctctctgtgctctagctctctgtgctctgtgctctagctctctgtgctctgcctctctgtgctctagctctctgtgctctagctctctgtgctctagctctctgtgctctgcctctctgtgctctacctctctgtgctctacctctctgtgctctgcctctgtgctctagctcctctctgcctctctgtgctccagcctctgtgctctagctctctgtgcccacctctgtgcccgcctctgtgctctagctctgtgcccaccctctgctctagctctgtgctctagcctctgtgctctacctgtgcctcacctctctgtgcctctacctctctgtgcctgctctgctccctctgtgctctgcctctctgtgctctacctctctgtgctctacctctctgtgctctgcctctctgtgctctagctctctgtgctctacctctctgtgctctagctctctgtgctctgcctctctgtgctctacctctctgtgctctagctctctgtgctctacctctctgtgctctacctctctgtgctctagctctctgtgctctgcctctctgtgctctgcctctctgtgctctacctctctgtgctctacctctctgtgctctgcctctgtgctctacctctctgtgctctagctctctgtgctctagctctgtgctctgcctctgtgctctacctctctgtgctctagctctctgtgctctgcctctctgtgctctacctctctgtgctctagctctctgtgctctacctctctgtgctctagctctctgtgctctagctctctgtgctctacctctctgtgctctagctctctgtgctctgcctctctgtgctctagctctctgtgctctagctctctgtgctctgcctctctgtgctctacctctctgtgctctGTTCTCTACCTCTAGGCGTGGCGGCCTACGTGGGCTGGCAGAGCTCCTCCCTCCTGAAGCCCCTCCTCCAGCAGGGCCTGAGTGACACGGAGGAGTTTGTGATCTACAAAGCTCTGAACGCTCTGACCTGCATGTGTCAGCTGGGGCTGCTGCAGAGAGCCCACGTGTACGAGTTCGTCTGCGACATCGGtgagagtctgtctgcctgtctctctctctctctctctctgtctctctgtctctctctgtctgtctgtctgcctctctctctctctctctctctgtctctctgtctctctgtctctctgtctctctctctgtctctctctctctgtctctctctctctctgtctctctgtctctctctgtctctctgtctctctgtctgtctctgtctctctctgtctctctctctgtctctctgtctctctctctctctgagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttccattagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacggttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttccccagtagagtgacgtgttcccagtagagtggcgtgtccccagagtgacggttcccagtagagtgacgtgttcccagtagagtgacgtgttccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacggtgtccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtggcgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtggagtgacgtgttcccagtagagtgacgtttccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtggagtgacgtgttcccagtagagtgacgtttccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacggttcccagtagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgttccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtggagtgacgtgttcccagtggagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtttccccagtagagtgacgtgttcccagtagagtgacgtgttcccagtagagtgacgtgtccccagtagagtgacgtgttccccgtgttcccagtagagtgacgtgttccccgtgttcccagtagagtgaATGCTCCGTCCCGATTGGTCCGTCTGTGTGGGAGGGGCGGGGCTACGGGTTGACGCTGTGGTTGCGCTCGTCAGAGAACATCGCTCACCTGGCGGAGAGCGCGCTGCGGTTCCTGGAGCTGGTCCAGGAGAACAACGTGAACGCGGAGAGCGAGCCGAGCGGAGAGGACCCGGAGGAGGCGCTGCAccagaaggccaacgactcagctgctgtccgcacgcggtgaccttgaccTCAACGACAAGCACGACTGGCACCTCCGGGGGGCCTTCTTCGACAGCATCGTGGcctctgtgctctacctgtgcctcacctctctgtgcctctacctctctgtgcctgctctgctccctctGCGTGGCGGCCTACGTGGGCTGGCAGAGCTCCTCCCTCCTGAAGCCCCTCCTCCAGCAGGGCCTGAGTGACACGGAGGAGTTTGTGATCTACAAAGCTCTGAACGCTCTGACCTGCATGTGTCAGCTGGGGCTGCTGCAGAGAGCCCACGTGTACGAGTTCGTCTGCGACATCGtagagtga

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR045162	Family	Serine/threonine-protein kinase Vps15-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17583	PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0006623	Biological Process	protein targeting to vacuole	Interproscan
GO:0016236	Biological Process	macroautophagy	Interproscan
GO:0030242	Biological Process	autophagy of peroxisome	Interproscan
GO:0034271	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type I	Interproscan
GO:0034272	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type II	Interproscan
GO:0045324	Biological Process	late endosome to vacuole transport	Interproscan
GO:0071561	Cellular Component	nucleus-vacuole junction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-