Gene detail

Detailed information of HS18339 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS18339	PROTEIN KINASE C, MU	chr21	4956955	4963835	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS18339

CCGGAGGACAACGATTCACAGACGACCGAAATCTCCGACGACGAGGCGTCCGGAGACGGAGACGTGGCGACCGAGGCCGAGGAAGACGAGCAACCGCGGGAGCCGATGAGGTCAGAGGGTCACGGATTTATTCGGATGATGTCATCGTGTCGTCACCAGACAGCTTGACTGAATCTTCCCGTTGTGGCTTTACTGCCACCTAGAaGCGTCCAGGAGACACTGCAGGGCaCGGGCGCTACATCAGGGTCACGATTTTTTTTTAAAGTGACCTTTTTAAAAGTGACTTTTAAAACCGTTTCTTCTCCCTGACTCcgcctcTCCTGcccccccccccccccccTCAGTCCATGTTTCAGCAGCTACATCCCTCTGATGAGGCTCGTCCAGTCAGTGCATCACTCAAAGAAAAGAGTGGGAGGAGTCCTGAAAGAGGGATGGCTGCTGCATCACACCGACTGTGACACACTGGTGAGacacacacacacacacacaccacaTATATCCTCTCTGTAATTAGTTGCCTTTTTGGTCCTTTTTTTTCACGCCATTGAACTCCACTATTTGCGCGAGCCCAGACTAAAAGAGTTCAATGCTATTAAATATGTTTGATTTGACCAATCGATTGAGATCACAGGCGCCGCGCCAAGAAAGGTCGGCATAAGTGGACCGAACTTGTCAAGTCTGACGTAATGCGTCCTTTGGGACTAACCGGTTCATTCACTTCCCTCAAACATGCATCATGAATTATTCCTGTCGTCTGTCTTCCCAGAGGAAACGTCATTACTGGATCTTGGACTGGAAGAGCATCACCCTGTACCAGAATGAGAGCAGCaccaagtactacaaggtagaatggaccagcaaacactcttaggatatatatatatatttatatattatattaatatatatttatatatacagtatatataatatttatatatacatatcttatttatatatatatatataaatatattatatttatataaatattatctatatatattatctttttatatatatatatatttatttatataaatatatgtacacatacttatattatactgtatatatatattaatttatatatatattttattcatatatatatatatatgcatatatgttAATGCAACATTAGTGTTTTTATTCTCATTATATTTGTGCTCtCTCTCGCTCTCTTCCCAGGAGATCGCTCTGTCCGAGGTGCTGCAGGCCCGAGGCCCCGCCCACCTCGCCGTGCCCCCGTTGCCAGGCGACGGCGGCCACACCTTGGAGGTGGTCACGGCCTCGCTGGTGTACTGCGTGGCGGCCGGAGAGAGCGGGCCGGCCTGGGAGAGCGCCATCCGCCGGGCTCTGATGCCCGTGCAGAGCAGCGGAGAGGAGAGCCGCGGTGAGCCCGGCTTTGTATTCAAGTATTACGCAACATTTGATTATTTGTTTATTACAATTACCTCATTTCTGTATGAATCTGCTCCGATTCCAGATAAAAATCTGACGCTGTGCAGTGACGGCGTGGTGAGGATCAACACACTTATTGATTTATAATCCccagtgaacccctcagtgtgttgaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgcaggacatcggctcggtgtatcagatctccacagacgaggtgctcGGCTCGGGGCAGTTCGGAGTCGTGTACAAAGGTGACCAAAGTGTTTTAATTATTACAATTATTACAAGTTCAGATGTTCGGCATATAATGATGTCATCGTGTTGGAGGTTTGCAGCCGAGGCTCAGATGGAACATTTTAAAACCCTTTGCTTCAAGTTTCCTCATCTTGTTTTAATTAAAGGGAAGAAAACGTTCCCTTGACTCATTTTATATAGAAACAATAATTTATTTATCATCTTCATTCTTCATATTTCAAAGAAGTAACGCGAGTGACCTCACTCCTCAGGCACTCACAGGAAGTCGGGTCGGCTGGTCGCCATCAAGGTCATCGACAAGACGCGCTTCGCCACCCGGCAAGAGACgCAGCTCAGGAGCGAAGTGGCCATtTTACAGGTTCTTATGCATATTTAATACGCGTATTTATTGCCAGATTATTTTCTGCAACATCTAatatatatatatatatatatataaacttatattatataaatatttataaatattatatgtataataataatatatataatgtgtataatataaatgtgtatatatatatattttaatgtatatatatacatttatatatatataatatataaatatttatatacattatatgtatagtataatatatacaatatcaatatttaaataaataatatagatgtatatatttttatatatacatttatatacaggactgtctcagaaaattagaatattgtgataaagttctttattttctgtaatgcaattaaaaaaacaaaaatgtcatgcattctggattcattacaaatcaactgaaatattgcaagccttttattcttttaatattgctgattatggcttacagcttaagaaaactctaaaatcctatctctaaatattagaatatcatgaaaaagtatactagcagggtattaaacaaatcacttgaattgtctaattaactcgaaacacctgcacgggtttcctgagccttgacaaacactcagctgttataaatctttttttttacttggtctgaggaaatataaaaattttatgagataagattttagagttttcttaagctgtaagccataatcagcaataaagaataaaggcttgcaatatttcagttgatttgtaatgaatccagaatgcatgacatttttgtttttttaattgcattacagaaaataaagaactttatcacaatattctaattttctgagacagtcctgtatatatataatataaatatatatatttatttccttatattatatgaatatgtttgtatattatatgtataatataatatatattatataaatatgtatatatatatatatttatacatttatatatacaggactgtctcagaaaattagaatattgtgatgaagttctttattttctgcaatgcaattaaaaaaacaaaaatgtcatgcattctggattcattacaaatcaactgaaatattgcaagccttttattcttttaatattgctgattatggcttacagcttaagaaaactcaaatatcctatctctaaatattagaatatcatgaaaaagtatactagcagggtattaaacaaatcacttgaattgtctaattaactcgaaacacctgcacgggtttcctgagccttgacaaacactcagctgttataaatctttttttttacttggtctgaggaaatataaaaattttatgagataagattttagagttttcttaagctgtaagccataatcagcaatattaaaagaataaaaggcttgcaatatttcagttgatttgtaatgaatccagaatgcatgacatttttgtttttttaattgcattacagaaaataaagaactttatcacaatattctaattttctgagacagtcctgtatatatatgtacatttatttaaatatatatttacatttatattatatatCagaataagctttattggccatctatgtgttcacatacatagaatttgactccggttaaacttccgctctcggcgtacattcatgtaatttacaaatGTGTGTGTGTgCGTCCAGAATCTGTCCCACCTCGGCGTGGTTCTGTCGGAGGGGATGTTCGAGACGCCGGAGTACGTCTTtGTCGTCATGGAGATGCTCCACGGGGACATGCTGGAGATGATCCTGTCCAGCGAGCGAGGCCGACTCCCTGAACGCAACACGCGCTTCCTGGTCGCGCAGGTGAGATCCCTCCGTCGCCATGGAGATGCTCTGGAGGTCTTGAGAAAATATCCTAAAATGCTTATTTCACCACAGCTTCCTGTGTCCTTCTTAATCTTAAAACTCAAATCCCAATGACGGTTTATGATTGTAATGTAAAATAATTGAATCGAATCACCAGCTGACAAACAAAAGTCTCTCAGCATCCATCACAATCTGAATGAGTTCCTCTCCAGATCCTGGAGGCTCTGCGCTACCTGCACCTCAAGCAGGTCGCCCACTGCGACCTCAAGCCGGAGAACGTGCTGCTGGCCTCCAACCAGGCGCTTCCTCAGGTGGGctgctgcttctgctgcttctgctgcttctgcttctgctgcttctgcttctgcttctgctgcttctgctttttctgcttctgcttcttcttcttcttctgctgcttcttcttctgcttcttcttcttcttcttctgcttcttcttcttctttctccctcattttcttcttcttcttcttcttctgcttcttcttctttctccctccttttcctcttcttcttcttctcctctttcttcttcttctttttccacgagtcttcttcttctcctcccctttcttcttcttctttttccacgagtcttctttttcttcttcttcttctttttccacaagtcttcttcttctcctcctcctcccctttcttcttcttttttttccatgagtcttcttctttttcttctttttcttcttccctcccttcttgttcctcctcctccttcctccctccttctttctccttcccttcttctctcccccatcttcttatctgctccttcttctaaatgtcctttcacacacgtttcatgaccttgaacacctccctcctcctcctcttctttcttcttctttttccacgagtcttctttttcttcttccttctccctcctttttcttcttccctcccttcttgttcctcctcctcctttctccctctcttcttcttcttcttcttAACGTCCTTTCACACACGTTTCATGACCTTGAACCCCCCACACACACTCACTCTGTCAGGTCAAGCTGTGCGACTTCGGCTTCGCCCGCATCATCGGCGAGAAGTCTTTCCGCCGCTCGGTGGTGGGCACGCCGGCCTACCTGGCGCCCGAGGTCATCGGCAACGGCGGCTACAACCGCTCCCTGGACATGTGGTCCGTGGGCGTCATCATGTACGTGAGCCTGAGCGGCACGTTCCCCTTCAACGAGGACGAGGACGTCCGGCAGCAGATCACCAACGCCGCCTTCATGTTCCCGCGGCAACCGTGGGCCTCCGTGTCTCTGGAGGGTACGTGAAGGGTTTCTTTATCGTCTTCAAAAGACACGGACGTGAGGTCATCGCTGTCTTCACGAGATTAGATGTGTCTTCATCCTCTAGCTTTGACTCTCTGAGTGTCCTTGAACGCATCGTCAAGCAGAGCTTTAGATGATGCACCACTGCACATCAAGTAATGACCCAACTTACTTAGTATGTAGAGGACTTTATAACAGTGAGTGTTTAGAGagTTTCATTCATAAATCAGTGTTGAAATTATCTGTATGATTTTCCAATTTTTTTTAATTCATAGAGACATTGGAGTGCACCAGGAATCTTTTTTAACCACTTAATTAACTCCTTATTTACGATGTAGTTTAAATCCTATTGTTCCACGCGTATGTTCTCCTGTTGTCCACTAGGGGGCTCTAGTGGACACGCTCAAGGACATTcCTGAGTAAACCCTCCCTGTGTGCGTTTCCTCTCCAGCTGTGAGTCTCATCAACAACCTGCTGCAGGTGTCGGTCAGACGGAGGTTCACCGTGGGCAAAACACTGGGACACCCCTGGCTGCAGGTGAGAGGTACTGCACTGGTTTGTAGTCCAGTGGGAGCaGGATGCTGAACTGGTTCAGTTGAGGAGCTGAATGatatacaggactgtctcagtaaattagaatattgtgataaagttctttattttctgtaatgcaattaaaaaaacaaaaatgtcatgcattctggattcattacaaatcaactgaaatattgcaagccttttattcttttaatattgctgattatggtttacagtttaagaaaactcaaatatcctatctctaaatattagaatatcatgaaaaagtatactagtagggtattaaacaaatcacttgaatcgtctaattaactcgaaacacctggaaacacattttcaaatgtttgattttgttttgctgttataaatattcaaattttatgagataggattttagttttcttaagctgtaagccataatcagcaatattaaaagaataaaaggcttgcaatatttcagttgatttgtaatgaatccagaatgaatgacatttttgtttttttaattgcattacagaaaataaagaactttatcacaatattcaaattttctgagacagtcctgtatatatatatatgtgtatatatgtatatatatgtgtgtatatatatatgtgtatatatatgtataaatatatatatgtgtatatatataatataattataatattatataataatatatatatattatatataaaatgtattatatattataatatgatataatatttatttatttttaattatatattcattttatttattccttattaatgatatatattatatatatCCTTTTTTAAAATTTTACCCGGGAACCATCTGACCCCTCCTCTCCCCGGCTGCAGGACTTCCAGCTGTGGTGCGACCTCCGGGAGTTCGAGCTGAGGCTGGGCGTCAGGTACCTGACGCACCGCGGGGACGAGGAGCGCTGGGCGCGCCACGCCCGGGAAAAGGGCCTGGACTTCCCGTCCCACCTCGGCCGGGACCCCGACGACGACGACCCCGAAGTGCCGGAGGACAACGATTCACAGACGACCGAAATCTCCGACGACGAGGCGTCCGGAGACGGAGACGTGGCGACCGAGGCCGAGGAAGACGAGCAACCGCGGGAGCCGATGAGTCCATGTTTCAGCAGCTACATCCCTCTGATGAGGCTCGTCCAGTCAGTGCATCACTCAAAGAAAAGAGTGGGAGGAGTCCTGAAAGAGGGATGGCTGCTGCATCACACCGACTGTGACACACTGAGGAAACGTCATTACTGGATCTTGGACTGGAAGAGCATCACCCTGTACCAGAATGAGAGCAGCaccaagtactacaagGAGATCGCTCTGTCCGAGGTGCTGCAGGCCCGAGGCCCCGCCCACCTCGCCGTGCCCCCGTTGCCAGGCGACGGCGGCCACACCTTGGAGGTGGTCACGGCCTCGCTGGTGTACTGCGTGGCGGCCGGAGAGAGCGGGCCGGCCTGGGAGAGCGCCATCCGCCGGGCTCTGATGCCCGTGCAGAGCAGCGGAGAGGAGAGCCGCGATAAAAATCTGACGCTGTGCAGTGACGGCGTGgacatcggctcggtgtatcagatctccacagacgaggtgctcGGCTCGGGGCAGTTCGGAGTCGTGTACAAAGGCACTCACAGGAAGTCGGGTCGGCTGGTCGCCATCAAGGTCATCGACAAGACGCGCTTCGCCACCCGGCAAGAGACgCAGCTCAGGAGCGAAGTGGCCATtTTACAGAATCTGTCCCACCTCGGCGTGGTTCTGTCGGAGGGGATGTTCGAGACGCCGGAGTACGTCTTtGTCGTCATGGAGATGCTCCACGGGGACATGCTGGAGATGATCCTGTCCAGCGAGCGAGGCCGACTCCCTGAACGCAACACGCGCTTCCTGGTCGCGCAGATCCTGGAGGCTCTGCGCTACCTGCACCTCAAGCAGGTCGCCCACTGCGACCTCAAGCCGGAGAACGTGCTGCTGGCCTCCAACCAGGCGCTTCCTCAGGTCAAGCTGTGCGACTTCGGCTTCGCCCGCATCATCGGCGAGAAGTCTTTCCGCCGCTCGGTGGTGGGCACGCCGGCCTACCTGGCGCCCGAGGTCATCGGCAACGGCGGCTACAACCGCTCCCTGGACATGTGGTCCGTGGGCGTCATCATGTACGTGAGCCTGAGCGGCACGTTCCCCTTCAACGAGGACGAGGACGTCCGGCAGCAGATCACCAACGCCGCCTTCATGTTCCCGCGGCAACCGTGGGCCTCCGTGTCTCTGGAGGCTGTGAGTCTCATCAACAACCTGCTGCAGGTGTCGGTCAGACGGAGGTTCACCGTGGGCAAAACACTGGGACACCCCTGGCTGCAGGACTTCCAGCTGTGGTGCGACCTCCGGGAGTTCGAGCTGAGGCTGGGCGTCAGGTACCTGACGCACCGCGGGGACGAGGAGCGCTGGGCGCGCCACGCCCGGGAAAAGGGCCTGGACTTCCCGTCCCACCTCGGCCGGGACCCCGACGACGACGACCCCGAAGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22968	PROTEIN KINASE C, MU	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0089700	Biological Process	obsolete protein kinase D signaling	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-