Gene detail

Detailed information of HS18019 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS18019	-	chr20	26333901	26336010	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS18019

ATGGTCGGCAGGTTGAACTTCCCCAGCGGCTGTGAGGGAGACcCGCTGGGGATGAGCTGCGGGGCGGACCGGGGACTGGACAGCCCGGACTCCGGGTTGCCCCCGAGCCCCGGCGCCTGGCTGCAGCCCGCATGCGCAGACAAGACCCCCGGGGGCGCGAGCCCGGTGTCCGAGGAGGACGAGGGCGGAAGGGGCTCCATGGTTGGTATCTGCACTTCTACCTCGATATGcacttctacctcctcacgaccacttcaatgcacgtgacacatttaaaatacacttaaaatacacttctacctcctcacgaccacttcaatgcacgtgacacatttaaaatacatttaaaatacacttctacctcctcacgaccacttcaatgcacgtgacgcattcatttaaaaaacatttaaaatacacttctacgtcatcaccaccacttcaatgcacgtgacgcatttaaaatacatttaaaatacacttctacgtcatcaccaccacttcaatgcacgtgacacatttaaaatacacttaaaatacacttctacctcctcacgaccacttcaatgcacgtgTCATGGGACACGTGAGGTGGTGGTGTTTTTGGTTCTCTTCCACATATTGCATGtttttaatttcattaattttgcattttcaatttgtagttttaactgcaatgtgtagtttttaaccacatgtgaagtttttagtgtcgttttataaaatgtgtagttttaaccacatgtgtagtttttaaccaattgtgtagttttaaaaaaatgtaatttttaaccacgtgtagttttagtgtagttgttagccaaatttgtagtttttaaacttaaatgtttttttaatgtagtttttaaaaattgtagttttaaaccgaatgtgtagtttttagccaaatgtgtagtttttaaccgaatgtgtagtttttaaccaagtgtgtagttttagtgaagtttttagccaaatatgtatttttaaaccaaatgtttGAGCATGTTCTTGACAATAAGTCTTCTCTCATGGAGCCACTTCAGGACCCGACTGGCCCCAGGAGACCTTTTGGCTGCTCTTGATTCTGAGGGCTGATTATTTATTGATTGATGTATTTGTCTTCTTCTCATTGCAGGTTCCAGTTTTACCCTCTGGCTCTCTGCTGCAGCCCCGGTCCTACGGGGAAGGCATCGCACTCCACCCTCTACCGTCCACGGAGACGAGGTGGGcaacaagtacacaacaacaagtacacaaTGGGGGGGGGGgtttcccccattaatagaaattcaggggtatttaaaaataaattggtgtcactttttgtaacttgtgagataacatttaacctttgttcaaaaataataaatatacttaattaggcttaaaggatatgagcaattgtcataaaatggcaataagaatatagggcaataatcagactattaggctgtagtctacagattaagtgttttcttagaccaaaaaacataaatcagacaatcgtattccatttttatttctttgtggttatttattgttactacattttttttttttttacaactattaataattctaacttaattctttgtttttttaataattatatttattgagatttgtttgtgtacctccctagtacaggcgatacagataagacacacacaataaataactcaaacaaaacaatattgaatgatctaaatgattagaggacctcatggggcctcctggtgacatcaggggcaacattatatttattTGTATATTTTCTCCCCCCAGGTTCACCTCCTCCGTGCGCTACGACTCGGCGCGGCACTTCATCCAGGCCGTGGCCCTGTGGCCGACGGGCCGGGCCCTGGAGCGCTACGCTCAGACGGTGACGGCCGTGCCtCACAGCACGTGGCGCCGCTACAAGACGCAGCTGGAGCTCCGCCCCCGCCAGCGGCCGCAGCGCTTCCAGAGCACCGCCATCGTGTTCCCCAAGGCGGCCAGCGCCCGCTACGCCACGGAGCTGAGCTACGACGGCCGGCGGCGCGCCCGCCGCTTCTTCTCCAGCGTGaAGCTGGAGGCGGCGGCTGACCGGCCGGCgCCTCCCCCTCACATGGTCGGCAGGTTGAACTTCCCCAGCGGCTGTGAGGGAGACcCGCTGGGGATGAGCTGCGGGGCGGACCGGGGACTGGACAGCCCGGACTCCGGGTTGCCCCCGAGCCCCGGCGCCTGGCTGCAGCCCGCATGCGCAGACAAGACCCCCGGGGGCGCGAGCCCGGTGTCCGAGGAGGACGAGGGCGGAAGGGGCTCCATGGTTCCAGTTTTACCCTCTGGCTCTCTGCTGCAGCCCCGGTCCTACGGGGAAGGCATCGCACTCCACCCTCTACCGTCCACGGAGACGAGGTTCACCTCCTCCGTGCGCTACGACTCGGCGCGGCACTTCATCCAGGCCGTGGCCCTGTGGCCGACGGGCCGGGCCCTGGAGCGCTACGCTCAGACGGTGACGGCCGTGCCtCACAGCACGTGGCGCCGCTACAAGACGCAGCTGGAGCTCCGCCCCCGCCAGCGGCCGCAGCGCTTCCAGAGCACCGCCATCGTGTTCCCCAAGGCGGCCAGCGCCCGCTACGCCACGGAGCTGAGCTACGACGGCCGGCGGCGCGCCCGCCGCTTCTTCTCCAGCGTGaAGCTGGAGGCGGCGGCTGACCGGCCGGCgCCTCCCCCTCAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15068	FAM101	FAM101 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028215	Family	Refilin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31848	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031005	Molecular Function	filamin binding	Interproscan
GO:0032432	Cellular Component	actin filament bundle	Interproscan
GO:0048705	Biological Process	skeletal system morphogenesis	Interproscan
GO:0061181	Biological Process	regulation of chondrocyte development	Interproscan
GO:0061182	Biological Process	negative regulation of chondrocyte development	Interproscan
GO:0061572	Biological Process	actin filament bundle organization	Interproscan
GO:1900158	Biological Process	negative regulation of bone mineralization involved in bone maturation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-