Detailed information of HS17849 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS17849HYPOXIA-INDUCIBLE FACTOR 1 ALPHAchr202114765321161829+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00989PASPAS foldDomainInterproscan
PF11413HIF-1Hypoxia-inducible factor-1FamilyInterproscan
PF14598PAS_11PAS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000014DomainPAS domainInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR013767DomainPAS foldInterproscan
IPR021537DomainHypoxia-inducible factor, alpha subunit-likeInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0071456Biological Processcellular response to hypoxiaInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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