Gene detail

Detailed information of HS17682 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS17682	DIABLO HOMOLOG, MITOCHONDRIAL	chr20	17291009	17292546	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS17682

ATGCAAGCTGTTGTTCAGTGTTCAGTGTGTGCAAGCCGTGCTGCCGGAGGACTACTGCGAAACCAGACCGATCTATCACTGCTGCTGACCAACAATGTGCTCAGTCGAGGAGCAGCCAGTATCCGTTTCGGGTAGGTTATGAATCATAAGCAATTATGAATCATGCCATTGCCTTGACTCAGACCGTGCCTGTTGATTACAACTCACTGAAATACCATTGATCAAGACTAATAACCTTCTGTCCCATTTCTCAGCAGCAGGAAGCCTGCAGTTCAGAAGTTGGTGGAACGAAGAGATATTGAGCACGTCGGCATAACACCTTTAAGTGTCGGCCGTGGGCTTTGTGCTATCCCTTTTACACAGGTGGGTTACTCACCAATGTCCTCGAGCTGCaCACATCGTGTGTTCtTTCAGACAGagTTTGTTCTTGTGCTCCATGTTAATGGCCTGAATGTTCCCACATTTGTAGCAAATGGAAAACCTCTCTCACGACTCCCTGATCAGAAGAGCTGCCTCAGTGGTGACAGACAGTTCCAGTACCTTCCTCTCCCAGACCTCCTTGGCTCTAATACATGCCCTGACAAACTACTCAAAGGTAGATTTTTATCTAATGTGTAACCTTTTTACAACCTAGAATATTCTTTTTCATGCTACATTAATCAGACGCAATTATGTGTAAAAGAAATACCTCTGTACTTGAAAAATAGCCGATTAGATCATTTCAAAATAAACCAAAGTAAAATAGCATTAAATTCAGAcaGTGTTTTTTTTGGTTTAAATGTAAAAATGTACAAATACTTTTATTTTGAAAATGCCCAGGTACTATCGCTGACTGTCTGTCTTCCTCTGTTTGCCAACAGACTGTGCATACACGCATTGTTGTCCAAAGACGGTATTTAGTCTCACTGGGAAAACTGACACAAGCAGAGAAGGATTCCTTCCTGGAGGTGATCAATTGCCAGCGTGCAGAGGTAAGTTTGAATGAAAACACATCTAAATGTACTCCAGCTTTTTATTTTTATTTTCAGTTAAAATTGGAACATTTTAAATCAGCTTTTACACTTTGCAGAAACCATTTTTAAAAGACACTTTAATCATATTGCATTTGTCTCATCTTTTCGTCCTCACAGGCTAGTGACAGACGACATGAATGCAAATGTGTCGAGTCAACCTGGATCATTGCTGTCAACTTGTGTAAAATAGCAGCCGAGGCAGCACAAACCTCAGGTCAGTGAAACTTtCACAGCAGTATCTCTTAGGtCGGTTTTACCTCGAcCCTgAAACCTTCTCAGAAATGTAACAAATTGCATGTTTGCATCTTTTTTGTGTTTCCAGGAGCCGAGCAGGCGTCCATCACAGTGAGGAAAAACATTCAGGTGGCCCAGTCACAGGTGGAGGAAGCTCGGAAATTGTCAGCGGATGCAGATAAAAAGTTGGCCGAGACTAAAGTGGAAGAGATCCAAAGGATGGCAGAATATACCGCCTTTCTAGGAGATAGCGAGGAGCATGAGGTGCAGGAGGCGTATCTACGAGAGGACATGCAAGCTGTTGTTCAGTGTTCAGTGTGTGCAAGCCGTGCTGCCGGAGGACTACTGCGAAACCAGACCGATCTATCACTGCTGCTGACCAACAATGTGCTCAGTCGAGGAGCAGCCAGTATCCGTTTCGGCAGCAGGAAGCCTGCAGTTCAGAAGTTGGTGGAACGAAGAGATATTGAGCACGTCGGCATAACACCTTTAAGTGTCGGCCGTGGGCTTTGTGCTATCCCTTTTACACAGCAAATGGAAAACCTCTCTCACGACTCCCTGATCAGAAGAGCTGCCTCAGTGGTGACAGACAGTTCCAGTACCTTCCTCTCCCAGACCTCCTTGGCTCTAATACATGCCCTGACAAACTACTCAAAGACTGTGCATACACGCATTGTTGTCCAAAGACGGTATTTAGTCTCACTGGGAAAACTGACACAAGCAGAGAAGGATTCCTTCCTGGAGGTGATCAATTGCCAGCGTGCAGAGGCTAGTGACAGACGACATGAATGCAAATGTGTCGAGTCAACCTGGATCATTGCTGTCAACTTGTGTAAAATAGCAGCCGAGGCAGCACAAACCTCAGGAGCCGAGCAGGCGTCCATCACAGTGAGGAAAAACATTCAGGTGGCCCAGTCACAGGTGGAGGAAGCTCGGAAATTGTCAGCGGATGCAGATAAAAAGTTGGCCGAGACTAAAGTGGAAGAGATCCAAAGGATGGCAGAATATACCGCCTTTCTAGGAGATAGCGAGGAGCATGAGGTGCAGGAGGCGTATCTACGAGAGGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09057	Smac_DIABLO	Second Mitochondria-derived Activator of Caspases	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009062	Homologous_superfamily	Smac/DIABLO-like superfamily	Interproscan
IPR015142	Family	Smac/DIABLO protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32247	DIABLO HOMOLOG, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006915	Biological Process	apoptotic process	Interproscan
GO:0006919	Biological Process	obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process	Interproscan
GO:0008631	Biological Process	intrinsic apoptotic signaling pathway in response to oxidative stress	Interproscan
GO:0008635	Biological Process	obsolete activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c	Interproscan
GO:0051402	Biological Process	neuron apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-