Detailed information of HS17652 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS17652BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2chr201597829815984262+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09103BRCA-2_OB1BRCA2, oligonucleotide/oligosaccharide-binding, domain 1DomainInterproscan
PF09104BRCA-2_OB3BRCA2, oligonucleotide/oligosaccharide-binding, domain 3DomainInterproscan
PF09121TowerTowerDomainInterproscan
PF09169BRCA-2_helicalBRCA2, helicalDomainInterproscan
PF21318BRCA2DBD_OB2BRCA2, OB2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR015187DomainBRCA2, OB1Interproscan
IPR015188DomainBRCA2, OB3Interproscan
IPR015205DomainTower domainInterproscan
IPR015252DomainBreast cancer type 2 susceptibility protein, helical domainInterproscan
IPR015525FamilyBreast cancer type 2 susceptibility proteinInterproscan
IPR036315Homologous_superfamilyBRCA2 helical domain superfamilyInterproscan
IPR048262DomainBRCA2, OB2 domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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