Gene detail

Detailed information of HS17058 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS17058	FIBROBLAST GROWTH FACTOR	chr19	25604848	25610680	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS17058

aaagCCGTGCACACAGATCTAAGCCAGCTGCCCGGATTCAAACACTTGAAGGAGGCACTCCTCGACTCCTCGTACTCACAGGACGACGGAAAAACCCCACGAAGGAGCAACCGGGAGGAGAGAGAGACGTCTCGGAGTCTGCCTCCGACCTCCAGGAGTCAAAGGGCACTTGTTGGGGGGGCTtCAAGCAAACTGACCTCTAAGAGCCGGGTTGCGTTggaggaggaggaggaggaggaggaggaggaggCAGTCGGTGGGAGGTGGGAGGCCACGGCGGGGCTCCTGCACCACTCgaggaggagaagggagacggaggagcagtcgcgaggggggccgagaggagaggaTATGGCCACGGGAGAGATCACCACACTTCCCTCCACGCCGGAAGATGGCGGCGGCGGCTTCGCTCCCGGTGCGTTCAGGGACCCCAAGAGGCTGTACTGTAAGAACGGGGGCTTCTTCCTCAGGATCCGCTCCGACGGCGGCGTCGACGGGATCCGGGAGAAGAGCGACCCACACAGTAAGTGcttccagccgccgcgcgcgcgcgcgcacacacacacacacacacacacacacacacacacacagagcttctttatggtCTCCAGCTCACTGCGCTTCAGCGTCACGTTCGGTAAACACTGTGAAGCCTGGAGAGGCCTCACCaactgtgggtgaatgggagtgagtgtgtgtgcctctgtgtgtgtgtgattgggagtgagcgtgtgtgtgagtgtgtttgtgtgtgagtaagtgagtgtgtgtgtttgtctgtgtgtgtgtgtttgtgtgtgtgagtgggagtgagtctgtgtttgttcaaggttcaaggttcaaggttttttatttgccatctgtgcctagaccagcagtccagacacatcggaattatttttgcagggttctccgagtcaacagaggtacagaggtgtgcgtgtgtttgtgtgtgagtgagtttgtgtgtttgtgtgtgtgtgagtaagtgagtgtgtgtgtgttagagttagtgtgtgtttgtgtgtgagtgagtgtgtttgtgtgtgtgagtgagtgagtttgtgtttgtgtgtgtgtgtgtgtgagtgtgatgcttctcaaacgcacttgtttgtcccttCAACTGGGATACCCCCTCGTTGCCCCTGATTGCTTTGGAGTGTGTCTGCAGTTGCATCAGTAagggggaggggcaggaggaagaggaggagcaggaggaggaggaggagagggaggGTGGGGGGGTcCAAATACATTTGGGGGTTTCAGAGGAAGAACTCGTGTCCTGTGACATTTGGAGCAGGTGTGTCCAACCTGGTGCCTGATGGGAAGCACGAGATATTTATAGGATCATTTaaaactctcctcgttatgtggactctcttgtgagctccgtcatgtggacctctcctccggactctctctctccgtcatgtggactctcctccgtcatgtggactctctctctcctccgtcatgtggactctctcctccatcatgtggactctctcctccgtcatgtggactctctcctccatcatgtggactctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctcttccgtcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctcctccgtcatgtggactctctctcctccgtcatgtggactctctcctccgtcatgtggactctcctccatcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctcctccgtcatgtggactctctctctccatcatgtggactctctcctccatcatgtggactctctcctccatcatgtggactctctctctccgtcatgtggactctctctctccgtcatgtggactctctcctccgtcatgtggactctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtggactctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccatcatgtggactctctcctccatcatgtggactctctctctcctccatcatgtggactctctctcctccgtcatgtggactctctctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctctcctccatcatgtggactctctcctccatcatgtggactctctctctcctccatcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtggactctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctccgtcatgtggactctctccatcatgtggactctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctctcctccatcatgtggactctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctctcctccgtcatgtggactctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctctcctccatcatgtggactctctctcctccatcatgtggactctctctctcctccatcatgtggactctctctctcctccgtcatgtggactctctctcctccgtcatgtggactctctctcctccatcatgtgCCGTCCCATGCCAGATCTTTGAGAAGTACCATGCTGCACGTGTGGGACACattaaaaccagattaaaaccagattaagaccagattaaaaccagattaaaaccagattaaaaccagattaaaaccaTACCGTTTCCTTTTGTGGTTTGGTTCAGGCTGgTCCaTCAGCAGCGCCTCCTCCAGAAgGAATGTGGAGACCTAACAGATACTAACATATCACATTCTTCATTcccccccccccccccccAGTAAAGCTCCAGCTGCAGGCCACCTCGGTGGGGGTGGTGGTCATCAAAGGACCGTCCGCTAACCGCTACCTCGCCATGAACCGGGACGGCCGGCTGTTCGGAGCGGTGAGTGAAGCCGGACCTCGAACACGAGCCGCATTTGAACCCCAAATATTAAAATAAAAACCTCTTGTCATAGTCAgCGCTGAGAATAAGAACATTAAAAAAAACAATATTACAAGAGGTCAAGCTGTAGGTGTTTGAGATTCAGACACAATAAACAAAACAAATAACAATATGCAGTAAGAGGAGAGGAGGATGGGCCTGCcacacatgacacacgcccctcagagggctttacaggctgtacacatacctgttacctccctgacctttgacctcacatcggatcaggaacaacaggaacgacaaaagcgaagaaaccttcaggagaataGACGTCATGTGACCAGTGACATCAGCAgaatcagtgacttttaaattcttaaaactcatttgtatgcaacagtttttaagtgacgtcgtcctctcgtgccgtttccttggttcATGAAGTTGTCAGGAGGCCGTTCCTCTAAGGAAAGAGGAAACGAGTCGccATGTTGAGATGAAGATGATAAACGTCGGCCGCCAAAGGAATAaCATGTTCCCGTCTAATTGAGTTTGACTGTTTATGTTTTATATCTGATGATAGAATTTGcCACTCGGACAGAAGTTGATACGATTTATTCTTCATTTTAAATATTTATTTCGAAAATAACGTTCCTGATGTAAAAATACTGAATATCATGCACTTTTTTtTTTttgTgTTAACatatatttataaatgtttatatatgtttatatatatttatTTATTTAGAATTTATACATTTTTATgtgtgtttctataagtttatatgtatttatatacatttatgtacgtttaaatacgtttatacatatttatgtttctacttgtttctatacgtttgtgtttatatacattcatacatgtttatatacgtttataaatgtttatatacgtttatacatgtttatatttatttatatgtgtttatatacatttatacatgtttatatgtgtttataattatatacgtatatacatgtttatatttattcatgtgtttataattatatacgtttatacatgtttatatttatgtgtttatacatgtttatatttgtttatatgtgtttataattatatacgtttatacatgtttatatttatttatatacgtttatacatgtttatatttgtttatatttgtttatacatgtttatatgtatgtgtttatatacgtttatacatgtttatttttgtttgtgtttatatacatttatacatgtttatatttatttgtatatgtttatatacgtttatatttatgtatatgtgtttttctagatttataaatttttatttgtatatgtttatatacgtttatatttatgtatgtgtttttatagatttatacatgtttatttttatttgtatgtgtttttatagatttatacatgtttatatttattgttatgtgtttatataCgTGTATACACGTTGATAAACGTCCTTACGATGTTCAGGCTCCTGATCGATGCTTCAGGTCGGTGAAGGTCAGGTAAAGACAGGAAGTAAAACAAAAGCTCCTCAAATACAAAAAAATGtCGACGCCAGAAGAGAGAGACTTTCTGTCTGGTGCCCTTATTTATGAACCCCGTGGCACAACTTCCTTTAATAATAAATAATAAAGTCTTTACTGCATGagacAGACTCCTTCAAGAGAaAACAGAGAGGCGGCATCGAGCTcCGGGGGCTTTTCTTTTTAATACTTTAATGTCATAAATTGTGCAGCATTACACATTTTTTCTTCCTTTCCAAAAACATACTCCACACATTAAATCAAATGTCACGCAAACACGAGCAGAGAAAAGAAAAGAAAACATGCCGTGTGAAATCCTGCAGACTTTCCATGGGTTGAGATATTCAaAGTTTCATAGTTTTGTGACTGTAACTGACGCTCGTCTCCTCGTCTTCCTCTCCAGAGACGAGCGACGGACGAATGCCACTTCCTGGAGCGGCTGGAGAGCAACAACTACAACACCTACCGCTCCAGGAAGTACCCCAGCATGTACGTGGCGCTCAAGAGGACCGGGAAGTACAAGTCCGGCAGCAAGACCGGGCCGGGCCAGAAGGCCATCCTGTTTCTGCCCATGTCCGCCAAGTGCaaagCCGTGCACACAGATCTAAGCCAGCTGCCCGGATTCAAACACTTGAAGGAGGCACTCCTCGACTCCTCGTACTCACAGGACGACGGAAAAACCCCACGAAGGAGCAACCGGGAGGAGAGAGAGACGTCTCGGAGTCTGCCTCCGACCTCCAGGAGTCAAAGGGCACTTGTTGGGGGGGCTtCAAGCAAACTGACCTCTAAGAGCCGGGTTGCGTTggaggaggaggaggaggaggaggaggaggaggCAGTCGGTGGGAGGTGGGAGGCCACGGCGGGGCTCCTGCACCACTCgaggaggagaagggagacggaggagcagtcgcgaggggggccgagaggagaggaTATGGCCACGGGAGAGATCACCACACTTCCCTCCACGCCGGAAGATGGCGGCGGCGGCTTCGCTCCCGGTGCGTTCAGGGACCCCAAGAGGCTGTACTGTAAGAACGGGGGCTTCTTCCTCAGGATCCGCTCCGACGGCGGCGTCGACGGGATCCGGGAGAAGAGCGACCCACACATAAAGCTCCAGCTGCAGGCCACCTCGGTGGGGGTGGTGGTCATCAAAGGACCGTCCGCTAACCGCTACCTCGCCATGAACCGGGACGGCCGGCTGTTCGGAGCGAGACGAGCGACGGACGAATGCCACTTCCTGGAGCGGCTGGAGAGCAACAACTACAACACCTACCGCTCCAGGAAGTACCCCAGCATGTACGTGGCGCTCAAGAGGACCGGGAAGTACAAGTCCGGCAGCAAGACCGGGCCGGGCCAGAAGGCCATCCTGTTTCTGCCCATGTCCGCCAAGTGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00167	FGF	Fibroblast growth factor	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002209	Family	Fibroblast growth factor family	Interproscan
IPR008996	Homologous_superfamily	Cytokine IL1/FGF	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11486	FIBROBLAST GROWTH FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001934	Biological Process	positive regulation of protein phosphorylation	Interproscan
GO:0005104	Molecular Function	fibroblast growth factor receptor binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008083	Molecular Function	growth factor activity	Interproscan
GO:0008284	Biological Process	positive regulation of cell population proliferation	Interproscan
GO:0008543	Biological Process	fibroblast growth factor receptor signaling pathway	Interproscan
GO:0009887	Biological Process	animal organ morphogenesis	Interproscan
GO:0010595	Biological Process	positive regulation of endothelial cell migration	Interproscan
GO:0010628	Biological Process	positive regulation of gene expression	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030324	Biological Process	lung development	Interproscan
GO:0030334	Biological Process	regulation of cell migration	Interproscan
GO:0042060	Biological Process	wound healing	Interproscan
GO:0043406	Biological Process	positive regulation of MAP kinase activity	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0050679	Biological Process	positive regulation of epithelial cell proliferation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-