Gene detail

Detailed information of HS15554 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS15554	SERINE/THREONINE-PROTEIN KINASE	chr18	13537867	13545652	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS15554

atgcgtgagatgaaaaaaacgcaaagtttcccaggcacgggggggtctcaaactctgggccaaacgcggaaaaagacatcccatgtcgagagagccgcgttctacggtggttacgcgaaagtgtccgtcgaaaatcaaacagtaagagcagcgttgcggagaaccgcatccgaatatcgaacctcttctaaagtggtttattggtgggcgtttgattactccagccccataatgcggcattcatggcgcaagtgcccgttcgattttcggacacctgttctgattgacaccatgtgaaggaattgcttcagtggcaaaacggagattaattgagatttttggagaggatgtaaggcaaggaatcctataagtcccacatgcatgcaaaaaaaaccatgtgaaggaattgcttcgagggcaaacaacgaatgtcagattgaaagagattggatcagcaagggcaatcataagtcccacacttcaaagcaagaaaacgcttgtgtgtgtgtgtgtgtgtgagagacagtgtacacaatgttcattgttgaacatgacagaccttgtgtcttagtagtactgtccatttttctcattcatgttggtgtgtgtgtgtgtttttacaacaatctgggatcagaggaggtgtgtggtgtgcgcatatatgtgtatgaatgtggctcttgacagtgacacagtaaaaaaatggctagtctctgctctgactggttggccacCCCTGACCTACAGTATGAACTCGAGTAAAATATGTAATCAGATATTTAATGGAGTACAGTTCTGATTAATTTTATAATAACAGTTAAAGTAATGGTATATTGTTACAACACTGATACTGTAAACTGAATTCAAACTAATTGTTGAATATGAATGTAAAATATGATATAGTTAATAACTTCGCAATTGTGAGATGTTGCTGCTTTTCTCTGTTTTCCATCATTGTCAGGTCTTTGtgacggggtgaggctcaggcgcagagagacaggctggatgcaatataaataacaaaaaaaagcactctttaatgaggcaaaacagtttacaaaaaaaaaaaggtccaaaaggggcaggcagaggatcgtcagtcagggcaggcaggcaggcaggcagggtcgaagcaggcaggatcagatacgacagacaggacgacgggaaaaagacacggaactagagacgacaatccgacagcagacaagggaaagactgacacaggtgtacgacatcagacagtaactagacaagagtggctgagggcaggtgcagggaattaaacaattaagacagagaagacacagaggagacataggagacacggaacgcaggagaaacagaacagggtgttacaatcattgtaaactgaatatttttaggttttgatcttctggtatgacataataagacatttgaagacaccggcattggttctTCATCACCCTGACTTGCATTTTTCACTAGAAAAAACATTATAATAATCAAAGCCTTTCTCCAAGCATATCTAGAAATAGAAACATTGTGTTCAGTTCCCACTATAACTACTCAGTCACCACCTTTTGGGCCACTATATGTCTGCCTCCCTGTCCCGGCCAATTGACCCTTCTATTTTAAAGTAAACAGTCAATAAGACTAAATATATTATGACACACCAATAATAGAGTTTTATcGCTCCTGATCCTCTGAGGAATCCCTCGCTCTAAATGCTGCAGACTTAAACACATtAAAATGCTTTTATGGGTCgATGAGAATTGAAGCTTTATGTGATTTTGCTTTGAGATTATTTTCAGGACTGTTTAAAAAATGAAACCAGAGATGAAAGAATCATCTCTCCTTATGTGCATCAGCTCCACTATGCAAACGATTCTGCTCCGCTGGTTCGTTGAGCACAAGATGGCCACGGTACAAAACCATCTCAAGGATTACCACAGATCCGCACTGGGTATTTATTATGACATGGGGATGGGAGGAGGTGCACCAAGAGACGGTCAGGGTTGCACAATGACTCTAGTGCTCTATAATTAACGGTTAATAACCATTAAAAGCAGAATAAACAGAATGTCAGAGAGGGTTGTTGTTGGCAACAGTCCTGTGATGTCTGCATCCTTTCATTTTAGGTTGCACTTGAGTGAACTTCATATTGCGAAACCCTTAAGGTGCTCCACAGTGTGAAGGATGGAAGAGAAGAAGGGATATTTGCTCAAACCTGAACATTGAACTCCCATTGTGTATTGCATGACGGTGCTGTTTCACACACATGTAAAGGATCCCTGTGGTTGCTAACAATGTTTGTGTGTTCAGGCCTCCTCCTGAGCTCCCTCCCACGCTCCTTTGGGGAGACTGTGTAAATACACACTATTCTGCCTCTCACCATCACCGTAATACATAATGCAGGCGAGTCTCCCTCAGAAACAGCTACACCACATTTACTGtatttattattgaggagattaaaaatagtctttttTGTTGTTGTTgaaacaagtgtatacatatatatatatatatatatatatatatatactatatatacatgtctgtatgcatcggttgctgtacctcctgagcattttcttagccctacaaaaatcttagtgtcaccatttttatttattcGTTCAACACACATAGATGACTGGTATTTGGAGATATTTTTTAAAACCTTGTGGATGGTTGAGAGGCAGTTTTACTACTCAGTAATCTTTATCTTGTGTCGGAATCAAACAAAAACACCCCTTTGCACTTCTTAAAATTAATCAAATTTAAATCCATCATGGCCCGTATAGCCTAAGAACAATACTCTCCCATCTTGTCTATTTCACTCCGCACcccaacacatattcctcttacttgttctaacatttgcatatgtgtgtgtgtgtccctgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtttccactgcctgtgtttaggggagCTTTCTCAGAAGTCGTACTAGCAGAGGAGAAGAGGACTCAGAGGCTGGTGGCCATCAAGTGCATCCCCAAGAAAGCATTGGAAGGCAAAGAGAACAACATCGAAAATGAGATTGCTGTACTACACCGGTGAGGACACCGAGGTTCCTTGCAATGCGTCAGCTGGTGTTTTGTGTCCAACGGGACAAATTAGTCAGTGCAGTCTCTTCCAGCAATGCATGCACAGATGCATAATATATGCAAGGGGTCAATTGAATAGGTGACTAAATGCATGGTGTCAATAGAAACAGTAGGATTGTGCTCTGGAAATGTCAGGAGTAAAGAAGATAGACCTATTTTTAGTGTCCCTGTTGCCAGGGCAACAGCACACAGAGGCGGAGATGGTGTGGAGTTCCCCACAGCAGTGTACTGAAAAAAAAGAATGACACAGAGAGGATGGGGAAGTGGTGAGGGGGGTAGGGTATGATAGAAGCAGAGAGATATGGCAGAATGTGAGGAGTGAAATTTGGTGAAATACTCAgTCACTATTAAATAAATGAGAGTCATGAGAGCGAGAGACTTGAAGGAAGTTAATCTGAAAAAAATGTAGCAGAAAAATCCCATGTCAGCTGCCGATGTGTTACAGCGATGCTGTGTCAACTTGACTTAAGAGCCAAGAGAGATGCTCGACTGTCTGTCGGCTGCTTCGTAACAATAAACAAACCAGTTGGTGAGATTTGTATTTATGATGGATATTCTGTCAAGCCCTACAATGACAATATCCCAAAGTGTTCTTTGCTACTGGTTCCAGCTGGTCATTGCTGTTCTTAGAGGCTGTGTATCAAGAGCTCTCTGTCGGTGATCTGAGAGCCTTTTCCAACTTATATTGTGGGGCAAACACAACGTTTTGATCCCAATTAACTACATGGTCTTTCAAACTGTTTTAATGTATGTAACGCAGCAAGAATGCCATCTGGTGACCGATTCAAAGCATGAGAGATTTCTTACCATTTCTGTCCATTTAATCTTTTTCAGAATCAAGCACCCCAACATCATTACGCTGGAGGACATCTTTGAAAGTACTTCGCACCTCTATCTTGTCATGCAGCTGTAAGTACTAATTGTGCGTTCTCTTACACAACTGATGATTATATGATAGAAGGGGCTCATTTAGCATGTATTTTCACTGCAAAGATTGTATTCAACAATTTACTGAAAATTGATTGGCAAAATGTTTTCAATATAAAATGTCTAGTTCAAAGTTGGCTGATTTTTGATATTTGGaaatggtatattttgggcgtggggtctttttgtcagacaaaacaaaacctttaaaaatgtttctagtggatctgaaaacttgtgaaggccattctattaatattGAGTTaacatgctgtgacaggcgtgtagccgtcaccagtaggtttccccccccctaagcaccaataaggactgagcagccagagggatagttggtaatcacttttattgcgaccccagactgtgtctctgttctctacgctgactcccgctcttctgtccgtccagctcctttatggagacagcctcagatacacaaacacatatcatcagctggactgatgaccaatctgattagcaatcagtccagctgatgacaatcagacaccgttccctgaaccacacccccgctccacccactcagcagccgagcataaacaccccccgctgccacaCATGCATTATATATTCATATAGATCCCATGTGCATCATATATCTATTTCAATAGTACTCAAAGTCAAAGCCATTATACATTTTCTTTACTGCACTAACTATTCGAGATGTCTTGTGTATCATTTTACTCTCTGTAAAATGATATTTGGCAACATatacactaccgttcaaaagtttggggtcacccagacaatttcgtgtcttccatgaaaactcacacttttatttatcaaatgaattgaacatttcatagaacatatagtcaagacattaacaaggttagaaataatgattaatatttgaagtattaattttgttctacaaacttcaagctcaaaggaagtccagttatagcttatcaccagcataactgttttcagctgtgctagcataattgcacgggttttctaatcagatattagtcttctaaggcgattagcaaacacaatgtaccattagaacactggagtgatcgttgctgtaaatgggcctctatacacctatggagatatttcattagaaaccagacacttccaccttgaatattaatttaccacattaacaatgtatagagtgtatttttgattaatttaatgttatctttattgaataaacagtgcttttctttgaaaaataaagacatttctaagtaaccccaaacttttgaacggtagtgtataTCTAGAATTAAAACAAAATTGAATCATATTTGGCTGCACAGCATAATTGCTTCTTATAGCCCACATTCAATACAAAACCGACATGACTTTCACCTGGCAGGGTATCTGGAGGCGAGTTGTTTGACAGGATTGTGGAGAAAGGTTTCTACACAGAGAGAGATGCCAGCCAACTCATCCACCAGATCTTGGATGCAGTCAAATATCTCCACGATATGGGAATCGTTCACAGAGACTTGAAGGTATCGTTGCTCAGGGAAGGCAGAAATTAAACAGCTCGATCTGGCTTGCAGTTGATGCTTTTCTTCCCGTTTCTCTTACCCTCCTTTTTGATAATTCGTCTTGTCGTCTGCAGCCAGAGAATCTGCTGTATTACAGTATGGACGAAGACTcaAAATCATGATCAGTGACTTTGGACTGTCAAAGATTGAGGGAGCAGGCAGTGTCATGTCCACAGCCTGCGGAACTCCTGGATATGTGGGTAAGGCCTTTATTTCACTGGTCTGCCGGACTCTCCTCACCGCCCCCGATCTCTTTCCTGGGAACTTAGTGCTTGATGTTCAACTGATATACCCTCTGTAGTCATTGCGCTGCGATAAGCTCTTTCATCCACTACTGAGGCAATTGCAAGTGTTTCACAAGTGCTCTCCACCTGTTTAATGTGACCTAGATCACATGCTATTACAAAGAGGTCAAGATTACTTGAATTCAGCACCCCTTCAGCTCTATTTTCCACTTTTCCTGACTGTGGGTTGTGCGTGTGTTTCACAGCTCCTGAGGTGCTCGCTCAGAAGCCGTACAGCAAAGCAGTGGACTGCTGGTCCATAGGAGTTATTTCTTATATTCTGTAAGTATGAGCTCATACCTCAATGTCAAGTCAGGACTAGTATTTCATATGTTCCAATATCGCTCCCTCAGGTTATGTGGATACCCTCCGTTCTACGATGAAAACGACTCCAAGTTATTCGAGCAGATTCTGAAAGCAGAGTATGAATTTGACTCTCCGTATTGGGATGACATCTCAGACTCAGGTACTACCGATTACACAAAACATGTACAGCAGATCCAACAGTGAGAACTAACATGTCAGAGTTGACTTACACCATGAACATTATTTTTGTTTGTAGCCAAAGATTTCATCTGTCACCTCATGGAGAAAGAGTCAATGAAGAGATATACATGTGACCAGGCCCTCCTGCACCCATGGTAAGAAAGTCAAAATACTtctatctatctatatctatctatTTGGCAATTAGTTAATTGACGGAACTGACCAATTTAACCATTTTAATGTATCAAGCATTCTTTCGCTTTAAGAtgctttctatgattgtaaattgatactctttgagatttggactgctggtcgaaacaccaaaacaagcatcataaatacgtcacgttgggttcttgaaaatgataatggcaagtttccactattttaACAGTCAAAATGAATAACTAAAAAAGAGAGAGACATTAATCAATACATTCAAAAAAGAATCAATAGTAGGGCTGTATTTTCttcattattgaatcatctgttcattattttctcgatcaattgattaatctctttgtctattttccagagacagaagtgacacattcaaatatcatgtgtttatccaaccaacagtgatattcagtttactatGTCAGTGGTTCAAGTGTGTGCTAGGGAGCCCCAGCAAAAGGGGAATAATTCATTGTCCCTATAATTCCACCATAACACAATAGCAGACAGAATATAAGACAATGTAGGTCATGGGTTTCATAGACTCTGTATTAACACATCTAAAAGAGTGTCTAATTTGTGTTAGTTTGAGAACCATCATATACTGTATCCGTGACAAAGAAAAGTATAACATCTTTAGAGATGCTGGGACGAGCTAAAGTTTGGCATTTTGCTTAAAAGaAATACTGgaacaattaatcaattttcaaaatatttgctgattaattttctgtcaatctactaattgacaaataataaagcgaatacgttTCAGCCCGGTGCCACTCCTCCCTTTATATTCGGTAATTCTTGTTGACTTTTCAGGATCTGCGGAGACACAGCTCTGGACAAGAATATCCACGAATCTGTCAGCGCTCAAATCAAGAAGAACTTTGCCAAAAGTAAATGGAAGGTCAGTGTCGTGGAGGAATCCTCATGCAGCCTACTCAACGAGCAGTATTGAGACTAGCAGATGCACATTTTGTTTCTCACTCAGTCGCTGTCAGTCACAGGCCGGTTTTTCCTTCCTCTCTCTCTGCCTGTGTAGCAAGCATTTAATGCCACAGCAGTGGTGCGCCACATGCGGAAGTTGCAGCTGGGTACTAGTCTCGAGGGACCGAGTCAGATTACTCCCACCAGTCCCTGCCATGGACATCTGCTCCCAgaggaggaggaggaggaggaggaggaAGACGATCTGGGGAATGGGGAGGAGGAGAGCatgcgtgagatgaaaaaaacgcaaagtttcccaggcacgggggggtctcaaactctgggccaaacgcggaaaaagacatcccatgtcgagagagccgcgttctacggtggttacgcgaaagtgtccgtcgaaaatcaaacagtaagagcagcgttgcggagaaccgcatccgaatatcgaacctcttctaaagtggtttattggtgggcgtttgattactccagccccataatgcggcattcatggcgcaagtgcccgttcgattttcggacacctgttctgattgacaccatgggagCTTTCTCAGAAGTCGTACTAGCAGAGGAGAAGAGGACTCAGAGGCTGGTGGCCATCAAGTGCATCCCCAAGAAAGCATTGGAAGGCAAAGAGAACAACATCGAAAATGAGATTGCTGTACTACACCGAATCAAGCACCCCAACATCATTACGCTGGAGGACATCTTTGAAAGTACTTCGCACCTCTATCTTGTCATGCAGCTGGTATCTGGAGGCGAGTTGTTTGACAGGATTGTGGAGAAAGGTTTCTACACAGAGAGAGATGCCAGCCAACTCATCCACCAGATCTTGGATGCAGTCAAATATCTCCACGATATGGGAATCGTTCACAGAGACTTGAAGTATGGACGAAGACTcaAAATCATGATCAGTGACTTTGGACTGTCAAAGATTGAGGGAGCAGGCAGTGTCATGTCCACAGCCTGCGGAACTCCTGGATATGTGGCTCCTGAGGTGCTCGCTCAGAAGCCGTACAGCAAAGCAGTGGACTGCTGGTCCATAGGAGTTATTTCTTATATTCTGTTATGTGGATACCCTCCGTTCTACGATGAAAACGACTCCAAGTTATTCGAGCAGATTCTGAAAGCAGAGTATGAATTTGACTCTCCGTATTGGGATGACATCTCAGACTCAGCCAAAGATTTCATCTGTCACCTCATGGAGAAAGAGTCAATGAAGAGATATACATGTGACCAGGCCCTCCTGCACCCATGGATCTGCGGAGACACAGCTCTGGACAAGAATATCCACGAATCTGTCAGCGCTCAAATCAAGAAGAACTTTGCCAAAAGTAAATGGAAGCAAGCATTTAATGCCACAGCAGTGGTGCGCCACATGCGGAAGTTGCAGCTGGGTACTAGTCTCGAGGGACCGAGTCAGATTACTCCCACCAGTCCCTGCCATGGACATCTGCTCCCAgaggaggaggaggaggaggaggaggaAGACGATCTGGGGAATGGGGAGGAGGAGAGC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004683	Molecular Function	calcium/calmodulin-dependent protein kinase activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-