Gene detail

Detailed information of HS15265 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS15265	UNCHARACTERIZED	chr18	4266622	4274404	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS15265

ATGGAGCGGCTGAAGAGGATCGTAAAGCTGCCTCACCGACTGAGACCAGCGCAGAGCAGCAAAGTGAGTAGGAGGAGCCTTCCTGCagggaggagggaggagggaggagggaaagagggacgagagaagagggaagagggaaaagggaaagagggaagagagaaaagggaaacaggggaagatggaaatgggaagaaggaaaggggaaaggggaagagggaaatgggaagaggggaagagggaaatgggaaggggaaatgggaaaaaggaaaaggggagaaggaaagggtaaaagggaagatggaagagggaagaaagaaaagggaaaacagaagagggaaaagggaaatgggaagagcgaaatgggaaaggggaaaagagaaaagggaagatggaaaagggaaatgggaagaggggaatgggaaaggggaaaagagaaaagggaagatggaaaagggaaagggaagatggaagagggaaaaaggaacagggaaaagggaagagggaaaggggtaagggaaaaaggggaagagggaaatgagaaaaaggaaaagggaaaagagatgaaggaaaggggaaaagggaagatggaagagggaaatgggaatagggaagaggaaaagggtaaaagggaagtgggaagagggaagagggaacaggTTTTCATCCACTTCCTCCCGATGCAGTTTCACCTCAACACATCAACATCACGACGGTGCACACACGAGAGAACACACACACACCTCCTCCACAACAACACGTTACCGTGACGACACAACTCTAGTCTTCCGagcagcgcatgcaggagcagcacacgtccagcagcagcCGGTTCGTGATTCCCGGAGCATCATCGCCGCGTCTCCTCCACACAGCTCAGTTTCgTGCTGCAACGAAAAATCCCCCAAAAATGTCTACGAGAGCAGAAACATCCGGAATGTTGACACATTTTGGCAAAGAttagctccggtgactgtgaaggccccggaatatatcacacacctcatttgcatactcattaaaacagtcACTcCGACAGATTGCACTCAGAATAACTTAAATGAAGAGTGACACGCTGAGACTCTGAGATAACACGTCTTGAGAAACAACTACAATGAAACGAGGATTACTATATCTTTATTTCATAATGTGTAGGTTTTTCTTCTATCTTTTGAAtgttgtacttgttaccttcgcatcgaaaatgcggaaggttatgttttgatcgccgtgtatttgtatgcgtgcgtgttattcgcataagtcaaaaagtattcaaccgaatcgtatgaaatttggtgggatgattggttattatccggggaccatttgattagatttggggattgatcgggtcaaggtcaaggtcatgaaaaggtcaacatcttctttttaccatagcacggtcaatttgtatccaagtggcatgcaactaatgccaaaatgttcataattcaatgcccaatgttgtgatatgtgaaggtatgcgctctaccaagtgcccattctagtttTCTACTTGTTTTTTTGTTGCTTTTAAATGCTGATGGTAAGAATAATGCTGATGGCTGTAATTATTATCATTAAATGATGCTATTGCTATATTGTTTGGTACCATTAGTATTCATATATTGTCGGGTTAACTATCCAAATGGACCTCAATCGTCCATTTCTGCTGTAATTTAATGACTTTCTCATTTATTTATCAACTGGCGTTTTTCTATTTTTCATATAAAGAATAATTCACATGATGTTCTTACGAGACTAAGTGCTGTTCTCTCCGTCTTCCGTCAGATCAACACCGACTACAGAAGTGAGTTTGCTCGCTGCCTGGAGCCCTCGCTGCAGCTCGGGCAGCGCGGCCCCCCCTCCGCCGTGGCGGCGAGGTGAGGCCCTGCAGCCGGGCGTCACGTGACCGGCATTACTAGATATTCCCTAACTCTCGGGGCATCTTTTGGATTCTTCCAAGAAAAGCAGGAAAAAGTCTGGGCAGGAAAACATTTTGTTGTTGTTGAAAGAATCCAAAAGCACAGATGGAAGAGTGAGAGGAAAGGAGGCaCATGGAAGTTATTCTGTCTGTCTGTAAGCTCTGGACACGGTGATGTAACTCACCTTGTTGCACGGTTTGATTTCCTAGGTTTGTTTCTAGAATCACATCAAATAACCAGAAAATATTTTTTTATTTAAACACCCATCCCTGCTCCTGTTGTCCCTTTACCCTGATGGATCAGCCCCCCCCCCCCACCCCCACACACACACACTGCATCCTGCACCGGGTCAAGGGCGCTAAGCAAGTTGTAAAGGAGAGTCGTCATCATGCTGGCATTAGTGTGCGGGCTTAAGAACTTGTGAGTGAACAGTCGGGGGGGGgAGATCGGTGGCCGGCCCGGCCGCCACTATTTTTATCGTGATTTCACAGAACTCTCCAGGATTCATCTGGAAGTCGGCGCGTCGGGGCCACTTTGTTCCTCGCCGCTGATGTCACAGCTTTGATCGGCGTCGGGTTGATGGGAGGTCAGGGACTGGATGGGCAGAGCATGACAAGAGTAGGGTggagagagggagggagagagagagggagagagagGTAAATGGTGTCCACAGCTCCTCTGTTGCATCACCACTGGGCAGGAGGGAAGGAGTCCGAGCCGGCCGGACGCACAGGTACATCTCTACGTGTTTTTATTATTTTAAAGTTCTTGCATCGTCTCTGTCGGCGTCTCGGTGCGATCCCCTCGGAGACGGAGCGTTCCTCGTGGAGCGAATATCGATTGCTTGAATTGTCGAGGCGTCTcCGGCCCTCTACACCCTCGGTGAACACCTGGTGGTGACGACAGGCGTTACCCAGGGTGCTTCACTCCACGCTCATTCGGCTCCACGAGGCGAGCAGACGGATCCCTCCTCGCCGTATGGTCGTTTTCAGGACGACGCCCACGTGGCGCCGCGTTGTGTCTGAAGACTTCCATCGGCGTCTGAGCGCTCCCTTCCTCCTCGAGCGCGGGATGCCAACCCGGCATGCggggagggggagggggggagggatccggtggccggccagctggcggcggcgaggggggggggagCCCTATTTGTGTcGTATAGTTTTCCCAGAACAGAAGCGGAGTCGGTGTTCTTTCGTGCGACTGATGCTTTGGCGCCGTCTCGGCGGAGGCGAAGACATCTGAGCGTTATGAGCGACAAGCGAGCTGCGCTTCAGAGGCCTGAGGTATCATCTGTATTCACTCAGGTAGTCTCACTGATCCCAGATCAGTTGTTTGAAGCCGGCTCTCTGACACaGTGTGggtcaaccaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttttttgagtaGTGCtcggcaggcggtgcagagcagccaataaaagacgctttttagtaaagtgtgagtcacctcgaccttccagaggtccgtcagcctgcaggcagaactggctgccccaaaatatgatacagtttgctgctgcagGGATGTAAATGCGTCCATAaggagaggagaggagagagaggagaggagagaggtgctcagtgtatcctaaacgtcccccagcacccgataggccgatagcagcatctctaggggcggggccaggtgaagctgactccgccctgactaagactattaatgaggaacgtcttcagtctgctcttCATCAGTAATCCGCTCATGCTTCCCCCCCTCAGGCACCAGTCCCCTCTCTCCGTGGCGTCCCCGTCTCTCAGCGAGATGCCTCTGGGCTCGCTGTGCAGCCGCAGGCCGACATGTCACCGCAACATCTGCACCAAGGTGCTGCTGGCCGAGGGCCGGGAGACGGCCTTCACCGAGCACTGCCGCAGCTACGAGGGCACCTACAGGGTGAGTCctgggaccagtggggctagtgctgggaccagtgctgggaccagtgggaccagtcctgggaccagtgggactagtgctgggaccagtgagactagtgctgggactagtgtgggaccagtgggactagtgtgggacgagcgctgggaccagtatgactagtgggactagggctgggaccagtgagaccagtgggactactgctgggaccagtgggactagtgtgggactagtgctgggaccagtcctgggaccagtggggctagtgctgggaccagtgggactagtgtgggaccagtgggactagtgctgggaccaatcctgggaccagtgggactagtgctgggaccagtggggctagtgctgggaccagtgggactagtgctgggaccagtactaggaccagtgggactagtgctgggaccagtactgggaccagtgggactagtgctgggaccagtgggactagtgctgggaccagtcctgggaccagtgggactagtgtgggactagtgctgggaccagtgagactagtgctgggactagtgtgggaccagtggggctagtgctgggaccagtgggactagtgtgggaccagtgggaccagtcctgggaccagtgggactagtgctgggaccagtgggactagtgctgggaccagtgggactagtgctgggaccagtgggactagtgctgggaccagagggactagtgtgggaccagagggactagtgctgggaccagtgagaccagtgctgggaccagtgcCTCTTTAGTGGCCGCCATTAGCAGCGTTCTCCCTCAACACTCATTTGACATCACATCCCGGTTGAACTTTAGCGCACTGTCCCTTTAAAGGAGATCGTCTCAGCgCTATGAGCTACATGCTAACGTCATGCTAACGTCGCGCTCAGCAGGCgCTgTTGTCCGCCACGCTAACGTCTTAGCGTGTGGTTAGAACGTGCTACTCGGCCCCAAACACACACAAAGTGACGTGCAGCAGATACTGGGGGGAATATTGTGAGTTTGGTCAAGTTTTGGCCATAAAAACACGAAAAAAGAACAGAAGTCCTTTTGGTTCTCCGAGGTTTGAGTCGTTTCTCTGTGTCTGGAGACACGTTGTTCAAACCGCCGCAGCAGCTCCTCCTCCCGGGCCCCAGGAgCCGCTCCTCAAAGCTCGCGGACGAACGCTCCGCCtTTCGGaCCTCGGAGTCACGTTCCCCCTCGGTTACAGACCCTCCAGgCGGAGATCCAGAATCTGAAGGACCAGGTCCAGGAGCTGCACCGGGACCTGACCAAGCACCACTCCGTCATCAACACGGACAGGATGGGGGAGGTCACGGAGCGCTCGCTGCACATCGACAGCCAGATCGCGTCGCAGCACgCCGCCGTGGAGACGATGAGGGGCACGTTCGAAGAGGTGAGCGGGTACCTGGACGATGACCTCcGCCGGAGGCCCCCGCCGCATGCGGACAGGCTGGTTCAGGCGGGGGAACGAAGCACCCCCCCCCCcTCGAGAGTGATGTGAGGATCATCTTTCCTCATTCTCCTCACAGGTCTGGGACGAGACTTTTCAGAGGGTCACCAACGAGCAGGACATCTATGAAGGTCCGTCTTCTGATTTAAAGATAATAAGTATCGCTCAAACGTTTTgAGTGTTTTTATCGTTTTATCCAACTGGTTTCAGCCCAGCTTCACGACCTGATGCAGCTGAAGCAGGAGAACTCGTACCTGACCACCATCACCAGGCAGATCAGCCCCTACATCCTGTCCATCGCCAAAGTCAAGGAGAGGCTGGAGCCCAGGTGTTCAGAGGatagattactatttttttacatttttatacatatatatatatatatataatttaaatatgtatatataattatatatcctattttcttaattttacatatatttaaataaatatatttatataggtagatatatatacacatatttatgtttacaaatatatataattaaatatttatatataaatatttatttatatatatttaaaaatatatatatatacaaatatatataacgctatattggttgaataatggcagtagtTGGGAGGAAATAGAAGCCACCAGAGCAGCTTTGATTTGAAGTACACTAGACAAAAAAAGGAGATAAAGAAAGAAAGATGTTGCATGTCATGTGAATCTAAATTGTAACGCGTGGCtTCAGAAAACAAAAACAATCCGTCTTTTAAAGCTGTGTTGTTTTCCTCTTCATGAAAGACGAAAACAGAGTTCAACATGAAaGGACGAGTGAGGCTCGGTaAATTAATCCGttgtcaacaaatccccaaaaagaccaaaaccaacagtgAAGTATATTTATCCTAAGTAGCTTCTTCCTCCTGTGacatcgctgcaccgggtgacacgttacttcatcaccaggaacacacacacacacacacatgctggagtttatcttcacaccgttctgctgcagtgaatagtcaccggagctgcaaatttgttttaatctgcggctgaaaatagtcgacatccagctgcaggtgcttcgctcccgttcgcatcgcgcttgctaaaaaactccagcgtctgttttggggggaaattcctgagccttgttaacgaataCGTCTTTATAGTTGTGAGGTGTGCTTAAGGATTTCCATATTAAGGAGGAGCAAAGGGACCCGGGGGCCTGAGTGAGCCACAGACTGAGTCGGGGGTTCTGTAACAACTCGATGGAAATGGTCCTAAATCAGAATCTTCTTTTTAGGTTTCAGGAGCCGAAAAAGCTCCACGACGACCGCACGGAGACGATGCTGAAGGTCTACGAAGAGAGCGCCGTGGCGAAGGACGGCCAAGACGGGTACGGGCAACCCAACCCGGAATTCAGAGATTAGTGTCTAGCTTTGTGAATGAGCTGATTGAAACATTGaTATATTTGCAGTATTACGAAATTGTGTGGCAACTTTGTACACATcaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaaatccaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaattccaaaaaagattgaactattcacaaaatttaaaaaaagattgaactattcacaaaattccaaaaaagtttgaactattcacaaaattccaaaaaagattgaactattcacaacattccaaaaaagGGGACTCCtGACTtGCTAAACTTTAAAACCGGAGTTTTGAGTTCTTCACTCAAATCCACCGGGACCTGAAATCTCGAGGACCTCCAGCAGGGGGAGGGTCTCCAGCCTCGGGAGACTTCCAGCGTATGGGGAGACAAAAAAAGCCACTTGGTCGCCTTACAAATGTGACAAGAATCATGTAAAAAAGTTTATTAAAAATCCTCTGAGTTTGTGGTCGTGGATCCCCGCGGCCTTGTTCTAGTCGTATCCGGGCAGGATTCAACACACGTTTTCAAAATATATATATATATTTTTTTTtATGAAACTCCTCCACAGTGACAGCCAGCCCTGCGTCGCAGACCCGGACCGGCACAAGAACAACCGGCCTCCGATCCTCGAGTCGGCCGACGGCTCCGTGAAGACCGGCCGCCCGGCCCGGCCCAGGGTTGCCACGGAGACGTCCaGCCATAATGAGACGCCTTCGATGGAGCGGCTGAAGAGGATCGTAAAGCTGCCTCACCGACTGAGACCAGCGCAGAGCAGCAAAATCAACACCGACTACAGAAGTGAGTTTGCTCGCTGCCTGGAGCCCTCGCTGCAGCTCGGGCAGCGCGGCCCCCCCTCCGCCGTGGCGGCGAGGCACCAGTCCCCTCTCTCCGTGGCGTCCCCGTCTCTCAGCGAGATGCCTCTGGGCTCGCTGTGCAGCCGCAGGCCGACATGTCACCGCAACATCTGCACCAAGGTGCTGCTGGCCGAGGGCCGGGAGACGGCCTTCACCGAGCACTGCCGCAGCTACGAGGGCACCTACAGGACCCTCCAGgCGGAGATCCAGAATCTGAAGGACCAGGTCCAGGAGCTGCACCGGGACCTGACCAAGCACCACTCCGTCATCAACACGGACAGGATGGGGGAGGTCACGGAGCGCTCGCTGCACATCGACAGCCAGATCGCGTCGCAGCACgCCGCCGTGGAGACGATGAGGGGCACGTTCGAAGAGGTCTGGGACGAGACTTTTCAGAGGGTCACCAACGAGCAGGACATCTATGAAGCCCAGCTTCACGACCTGATGCAGCTGAAGCAGGAGAACTCGTACCTGACCACCATCACCAGGCAGATCAGCCCCTACATCCTGTCCATCGCCAAAGTCAAGGAGAGGCTGGAGCCCAGGTTTCAGGAGCCGAAAAAGCTCCACGACGACCGCACGGAGACGATGCTGAAGGTCTACGAAGAGAGCGCCGTGGCGAAGGACGGCCAAGACGGTGACAGCCAGCCCTGCGTCGCAGACCCGGACCGGCACAAGAACAACCGGCCTCCGATCCTCGAGTCGGCCGACGGCTCCGTGAAGACCGGCCGCCCGGCCCGGCCCAGGGTTGCCACGGAGACGTCCaGCCATAATGAGACGCCTTCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR039320	Family	RING finger protein 207	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22635	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0044325	Molecular Function	transmembrane transporter binding	Interproscan
GO:0048471	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0055117	Biological Process	regulation of cardiac muscle contraction	Interproscan
GO:1901018	Biological Process	positive regulation of potassium ion transmembrane transporter activity	Interproscan
GO:1901207	Biological Process	regulation of heart looping	Interproscan
GO:1903762	Biological Process	positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization	Interproscan
GO:1903954	Biological Process	obsolete positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-