Detailed information of HS15181 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS15181E3 UBIQUITIN-PROTEIN LIGASE TRIMchr1826725202676297+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF13765PRYSPRY-associated domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR003879DomainButyrophylin-like, SPRY domainInterproscan
IPR006574DomainSPRY-associatedInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR050143FamilyTripartite motif-containingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24103E3 UBIQUITIN-PROTEIN LIGASE TRIMInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP