Gene detail

Detailed information of HS14583 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS14583	L-COA N-ACYLTRANSFERASE-RELATED	chr17	9120812	9122569	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS14583

ATGAAGATCCTCAACAAAGCCGAACTCCAGATTGCTGAAGGAGTTCTGCTCAAACACCTGCCCAAGAGCTTCATGGTAGGCGGCTGATGTACAgcacattcctcaatgtgtcatttttaactgctgtgccttgccatgtagctctacactcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaggtatacggattcatatatgggattaacaggaagaaaccaagcacACTGGAGGTTATCGTTGATACGTGGCCGGATTTTAAGGTTATCATTTGTCGACCTGACCCCAAGGTGAGGTCAAACACCAGTGGAAACGTTGTGCATACATCGAGTTTCTGTGTGCCACTTGATTGTTGAATGCATCGTTTATTTCCCACAACAAGCGAGTCCTGGAGTTCATGAAAAATGTGGTCTACTACTACACCCTGGATGACCAGATGTTAAGGAAAATGCTGAGAGAAGAGAATTCAGTTGACTGGAGCACGCACTTTGTCATTGCTGGTGAGTTAAGGTCACTGCACAGTGCTTCATATCATTCGACAGGCAACACAGGTTATTTGTCTCAGTGTAACTCAGTGGTGTATCTAGGTTACCGTTAagtacatttactcaagtactgtactttcagctttagataatggtactttgttggagtatttatatttcatgacactttacagttcaactccattacagttcaggagtaaatataccttctatttccatacattcatattatttgacagcTGAAGACCAAGTTGCTTTCTGAATACAATTGTAAACCTGAAACTGTATGGCAAACTTATTAAAATGTGCAGTATCACTATGAAAAATGAATGCTGCACTGTTGATAATCCATGTAACATAAATATAACTGTTGACCACTCACCGGGACCACTTTTTCTTTTACTTTTGATACTTAAATTTACTACATTTAGCTCAATATTATACACTTTATTTTAAATGTTTAATGCAGGATTGTAATGtAGTATCGTGTGGTGTTGCTATTTTCATGAGTAAAGGAGGTGAATATATTCTCCACAAATTTATAGAATGGCATAAATCCCTTTTGTCCTCCAGCATTGGACGTTTCCCATGCAAACATGATCAAAGAAGTGTCTTCTGACAGAGAAGTCAACAACCGAGTCTATTCTTTGGTGCATCTTATGTATTTGCCAGACAGCAGTCATCTGCCTCCACCAACAGCTGACAGGTTGTTATATCATTACAATGTACTTTTAAGGACACATATGTTCATATTTTGCTGTCATAAGTCAAAAGTAAAATATTATTGTTTCATTGGTTGTCATAATCTGATTCTCCACATAGTGAgCTTGAATCAAGGATTTCACCCCTTAACCTTTCCCACGTTGACTTGGTGAATAAAACCTGGAAGTTTGGCGGGAACCAGCAGAGTCGCATTAACATCAAAAACCTCATCAGCAACTTCCCATCATGCTGCATCACTGACGGCCAGGGCCAGCCCGTGTCCTGGATTCTGATGAATGATTACTGTGCTTTGGGCTTGTTGCACACTCTGCCAGAGTACAGAGGCAGAGGTTATGCCAAAGCTCTGGTCAACACCATTGTCAGGAGACTCCACTCTGAGGGCTACCCAGTGTACTGCTTCATAGAGGAGGACAACGCGGTATCCTTCGAGCTCTTTAAAAGCCTGGGTTTCATTGAGGATCCCTCATACAGGGCAACATGGTTGGAGTTAAACTTTATGAAGATCCTCAACAAAGCCGAACTCCAGATTGCTGAAGGAGTTCTGCTCAAACACCTGCCCAAGAGCTTCATGgtatacggattcatatatgggattaacaggaagaaaccaagcacACTGGAGGTTATCGTTGATACGTGGCCGGATTTTAAGGTTATCATTTGTCGACCTGACCCCAAGAACAAGCGAGTCCTGGAGTTCATGAAAAATGTGGTCTACTACTACACCCTGGATGACCAGATGTTAAGGAAAATGCTGAGAGAAGAGAATTCAGTTGACTGGAGCACGCACTTTGTCATTGCTGCATTGGACGTTTCCCATGCAAACATGATCAAAGAAGTGTCTTCTGACAGAGAAGTCAACAACCGAGTCTATTCTTTGGTGCATCTTATGTATTTGCCAGACAGCAGTCATCTGCCTCCACCAACAGCTGACAGTGAgCTTGAATCAAGGATTTCACCCCTTAACCTTTCCCACGTTGACTTGGTGAATAAAACCTGGAAGTTTGGCGGGAACCAGCAGAGTCGCATTAACATCAAAAACCTCATCAGCAACTTCCCATCATGCTGCATCACTGACGGCCAGGGCCAGCCCGTGTCCTGGATTCTGATGAATGATTACTGTGCTTTGGGCTTGTTGCACACTCTGCCAGAGTACAGAGGCAGAGGTTATGCCAAAGCTCTGGTCAACACCATTGTCAGGAGACTCCACTCTGAGGGCTACCCAGTGTACTGCTTCATAGAGGAGGACAACGCGGTATCCTTCGAGCTCTTTAAAAGCCTGGGTTTCATTGAGGATCCCTCATACAGGGCAACATGGTTGGAGTTAAACTTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06021	Gly_acyl_tr_N	Aralkyl acyl-CoA:amino acid N-acyltransferase	Family	Interproscan
PF08444	Gly_acyl_tr_C	Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000182	Domain	GNAT domain	Interproscan
IPR010313	Family	Glycine N-acyltransferase	Interproscan
IPR013652	Domain	Glycine N-acyltransferase, C-terminal	Interproscan
IPR015938	Domain	Glycine N-acyltransferase, N-terminal	Interproscan
IPR016181	Homologous_superfamily	Acyl-CoA N-acyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15298	L-COA N-ACYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0016410	Molecular Function	N-acyltransferase activity	Interproscan
GO:0016747	Molecular Function	acyltransferase activity, transferring groups other than amino-acyl groups	Interproscan
GO:0047961	Molecular Function	glycine N-acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-