Gene detail

Detailed information of HS13571 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS13571	DEOXYNUCLEOSIDE KINASE	chr16	125782	130958	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS13571

ATGGCTCTGGACCCCAAGAGGCCGCGGGCCGCCCCGGCGGAGAGGAACATCCGCCGGATATCCaTCGAGGGGAACATCGGTGAGTGGCTGAGCCGCGACATTGTAGCGTTCGAGCGCGCGCTCAACGTGTTCCATGTGTTTGTTGTTATACTGCCAATGCCGCTTTGACACTTCCGGGTTTTGTTTTCTTTTCCTTTGTGTGGCGCTCAGCGGCGGGAAAGTCCACGTTCGTGCGGCTGTTGGCGCAGCAGCGCGCGGGCTGGGAGGTGGTGCCCGAGCCCATCGCCAGGTGGTGCAACGTCCAGACGAAGGGCGGCGACTTCGAGGTACTGCACCTCCTGCCGCATTAAGAATCACACACACaCGCAGGCAATGTGTTTTATTCTTACTAATCAACTACTGGTGCAAAAAAAACCTGTTAGACATGTGTTTTGGGTTCTATTGCGCACGACCCTGtgatactagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcgcactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctattgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactcggaccctctgttgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactcggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcgcactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcgcactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactcggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctagtgcgcactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatcacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctggtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctctgatgcccactgatacgagatgactaggaccctctgttgcccactgatacgagatgactaggaccctctagtgcccactgatacgagatgactaggaccctGTCACGACCCTCTCGCGCCCACTGATACTAGACGACCGTAGGATCTTCTTCTGGGTTCAGGGTGCAGCTGCCGCATAGTTGCACCCACACCCAGAGGAACAGATGAGGGTGTCATCACCGGCCAGACATCGCTGCCCTCCCACCCTGCTGCAGGCCTCACGTATCGCTGCTTCAGCACACCCATAtctctctctctctctctatatatatatatatatatatatatatatagacaTTTTGTATacaactactttttttttaAAGTGTCAAGTTAAAGCCAAGTAACCGGTTTTTTTAGTGCGATTGTGTACCGTAAAAATGGACCGTCTGTTTGTGCAACTGTGTTCAGAGTATTTATTAAGAATAACACCAGCAATAATAATAAAAAACTAACTAATATTTCCCAGTGATTGCACAATAAGCCACGTCTGGTCTCCCGTTAAGAGTTGTCACGGTTCTGTTTAACCCCTCATGAGCAGGAGCTGACCACGTCTCAGAGGAGTGGAGGCAACGTGCTGCAGATGATGTACCGGCAGCCGGAGCGCTGGGCCTACACCTTCCAGAGCTACGCCTGCATCAGCCGGCTGCGGGCGCAGATGAGCTCGGCCAATGGGAGTCTCCGAGAGAAGGAGGACCCCGTGCAGTTCTTCGAGCGGTCCATCTACAGCGACCGGTACCGGGCCGATGTCTTTATGTGTCTTTACGTTAAAGAATATATTCACGGGGTTAGGTTTTTCTTCTTTTGATAAAACAATGTGGATTTCATGTTGCAACAGTTGAACATGTATTGATGGCAATGTTAAGatatatatatatatatcatttattatTAATCTGAAAAAAACCAGATAGAACAGTCGATCTTCTCCACACGGTTATTAAAGGTAACACAGGTCCTCCATGACCTCGATGACCTTTATGTCCTCACAGGTACATCTTTGCAGCCAACCTGTACGAGAGCGAGTGCCTGAATGAAACGGAGTGGTCCATCTACGAGGACTGTCACGGCTGGCTGCACAGCCAGTTCGGGAAGCAGCTGCAGCTGGACGGCATCATCTACCTGCGCGCGCCGCCCGAGGTGCGGCCGCGCTCTCGCCGCGTCGATCGCCCAAAGAGTCCCGACGTTCTAACGGCGTTCCTTTCCTTCTGCCAGAGGTGTCTGGAGCGGCTGCACCTGAGGGGCCGGCAGGAGGAGCAGGACATCCCTCTGGAGTACCTGGAGAAGCTCCACTTCAAGCACGAGAGCTGGCTGCAGCACAAGACCATGAAGTGAATGGCTCTGGACCCCAAGAGGCCGCGGGCCGCCCCGGCGGAGAGGAACATCCGCCGGATATCCaTCGAGGGGAACATCGCGGCGGGAAAGTCCACGTTCGTGCGGCTGTTGGCGCAGCAGCGCGCGGGCTGGGAGGTGGTGCCCGAGCCCATCGCCAGGTGGTGCAACGTCCAGACGAAGGGCGGCGACTTCGAGGAGCTGACCACGTCTCAGAGGAGTGGAGGCAACGTGCTGCAGATGATGTACCGGCAGCCGGAGCGCTGGGCCTACACCTTCCAGAGCTACGCCTGCATCAGCCGGCTGCGGGCGCAGATGAGCTCGGCCAATGGGAGTCTCCGAGAGAAGGAGGACCCCGTGCAGTTCTTCGAGCGGTCCATCTACAGCGACCGGTACATCTTTGCAGCCAACCTGTACGAGAGCGAGTGCCTGAATGAAACGGAGTGGTCCATCTACGAGGACTGTCACGGCTGGCTGCACAGCCAGTTCGGGAAGCAGCTGCAGCTGGACGGCATCATCTACCTGCGCGCGCCGCCCGAGGTGCGGCCGCGCTCTCGCCGCGTCGATCGCCCAAAGAGTCCCGACGTTCTAACGGCGTTCCTTTCCTTCTGCCAGAGGTGTCTGGAGCGGCTGCACCTGAGGGGCCGGCAGGAGGAGCAGGACATCCCTCTGGAGTACCTGGAGAAGCTCCACTTCAAGCACGAGAGCTGGCTGCAGCACAAGACCATGAAGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01712	dNK	Deoxynucleoside kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002624	Family	Deoxynucleoside kinase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031314	Domain	Deoxynucleoside kinase domain	Interproscan
IPR050566	Family	Deoxyribonucleoside Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10513	DEOXYNUCLEOSIDE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004137	Molecular Function	deoxycytidine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006139	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0019136	Molecular Function	deoxynucleoside kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-