Gene detail

Detailed information of HS13564 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS13564	PID DOMAIN-CONTAINING PROTEIN	chr15	23326182	23332346	-

Gene Structure

More details in Jbrowse Sequence

CDS

HS13564

ATGTCTGCAGAGGTGGAGGTCGGAGCGCCCGTCTCCGCCGAGCCCGCCGTCTCGTCCCCATCGGCCGGCACCCCCCCCACCTCCCCGACGACGGCCGCCTCCAAGGTCCCGTTCAAGAAGAAGAAAGCCCCGGAGAAGACCGACGAGTACCTGCTGGGCCGTTTCCAGGGCGACGGCGTGCGCTACAAGGCCAAGCTGATCGGCGTGGACGACGTGCCGGAGCCCCGCGGGGACAAGATGTCCCAGGACTCCATGATGAAGCTCAAGGGCATGGCGGTAGCGGCCCGGTCCCAAGGcAAACACAAGCAGAGGATCTGGGTCAACATCTCCATGGCGGGCATCAAGATCGTCGACGAAAAAGCGGGAGTGATCGAACACGAGCACCTGGTGAGCAGGATCTCCTTCATCGCCAGAGACGTGACGGACAACCGGGCGTTTGGCTACGTGTGCGGCACCGAAGGGCAGCATCAGTTCTTCGCCATCAAGACGGCACAACAGGCGGAACCGCTGGTCATCGACCTGAAGGACCTCTTCCAGGTCATCTTCAACCTGAGGAAGAAGGAGGCGGAGGCCTCGCAGAAGGGGGAAAATGGCGTCGCCGTAGCTGAGGACGGCGGTCCGGACGGCGGCGTGAAAGCGGCTCAACCGGCGGAGCAGTTCGACCTCTTCGGAGACATGTCGACCCCTCCAGACGTCCAGGCCCCAAACGTCGTCTCTAACGATATTCTCTTGCTGGACTTTTCCGCTGAAGTTGACAGCAATCAGAACTGCATCAAGGGCGACTCGTTGTCGAgTTCCTGTGGGCCGGACCGCGGCGCCGCTCCCCAGACAGAGAATCCCTTTTCCTCCCCGTTGGGCTACTTCCCGACCCCCGACAGCGACCCGTTCAGAGACGACCCGCTCGCCCAGCCGCCCGCCTGGTCGCAACTCGATAATTCCCACGCGTCGGCCGGTCTCCTGAACGGCGCCGCGCCGATCGTTAATAACGGCGGTTCGGGCGAGGACTCCGAACGCCTCGGCGAGCGGTCGTCCGGCGGGACCGTGCTCCTGGCGCTCGGTAACGGCCAGTGGCCACTAGGGGGCGCGGTTACTCGTTCCCTCGCCGCGGCGGACGGGATgGACTCGGGGACGGCCACGAACCCGTTTTTCAACCCTTTGAACGTCGTGCCCGACGGGGTAACGCATTACCCACAAGCCCCGGCGGCTCATAGCCGGGACTCgGTTGTCATAAGCCCGCCTCCGCAGAGCGGCAAGGCGGGACGGAGGAGCGCAAAGGCCGTGGTGAGCGACCCGTTTGGAGGCGAGCTCTTCTCGGCTCCGGGTCCCTCCTCGTCTTCCTCCTCGGGCGACTTCTTCACCGCTTCACCTCCGGCCTCCATCGCCGCTCTGGGGAGCCTTCAGTTGGCTCCTCCCGCTGCGGCCGGCGGGTGGGGGGCCTCCATGGCTCCGCCTTCAATGTTCCCCGTGCCCGGCGTGGCTCCAGGCCCCGCCTACCCGCACCCGTCTGCCTTCGGCGGCCTCCCCATCCCGCCGCCGGTCTGGGGGGCGCAGGGCCCCGCCCACTTTAGTGCCGCGCCCCTATCTCCGCCCCGCCTCAACTGGGGCCAGCCGCCGCCCGGtGCCCCCGTGTGGGGTCAGCCCGTCGTGACCAATCCGTTCCAGCCGGGTCCGTTCCCCGCGATGGTCGACCATCACGGgccggcgcgcccgcctccccggccgcccgGCAAGGAGCCGGCGGCGCCGCCGAAGGTGGAGAACACCGCCTTCACGGCTCTGGACCCCCTCGGCGACCGCGAGAAGAAGACCGGAAAGGACATGTTCAAGGACTTCCAGATCGCCAAACCGCCCGCCATCCCGGCGAGGAAAGGGGAACACGTGGGCGGCGCCGAGGCCATGAGCGGCGACGCCGGCGCCTTCGACCAGTACTTCAACAGCAAAGTGGGGCTGGTCCAGGACCACGaCGACCACGACGACTTTGACATCAATCGGATGTCGGCGGCGGTTCCCGCTGCGGCTCCCAGCTTCAGCGCCGGCCTCCTGGACGCAGCCCTCGCCAACAGCTGTGCGCtGGTCCAGGGACCCGACCAGGACGTGTTCGACCAGGCCTTCGGGGCGCCGCCTGCAGCCGCGGTACAGACGCGTGGATGCGTGTTTGAAGGCCCGTCGGCAGCAACAGAATCCCCTCATGTCTCGTTCCTCTCCCTCCAGCAGCCGGCGGCCTCTGCCTTCGGGGATCCTTTTGGAAACCCCTTTGCT

Transcript

HS13564

ATGTCTGCAGAGGTGGAGGTCGGAGCGCCCGTCTCCGCCGAGCCCGCCGTCTCGTCCCCATCGGCCGGCACCCCCCCCACCTCCCCGACGACGGCCGCCTCCAAGGTCCCGTTCAAGAAGAAGAAAGGTGACTCCTCCCCCCCcACgCCACCGCCATGGAGCCCGTGTGGTAGAAAGCATCGTTTACTTGACTTTAATTTGTTGCTGCAGCCCCGGAGAAGACCGACGAGTACCTGCTGGGCCGTTTCCAGGGCGACGGCGTGCGCTACAAGGCCAAGCTGATCGGCGTGGACGACGTGCCGGAGCCCCGCGGGGACAAGATGTCCCAGGACTCCATGATGAAGCTCAAGGTGAGGAGAGCGGGGCCGCATCGCCTGCAGGGGGCGCCGCGACGGGCTGGGTGCTTCAGGCCGGGCAGGAAGTGGGCGTTGTGTTTGTTGTTCGTGGCaTTCGGCTCCACGCCATTGAAACGTAACCAGAACCCGGAGACGGAACCCGTAAACCTCGAGCCGAGGAGCTGGAGGCCACGACTCATCGGCGGGGTCAGGCCTCCTGAAGGCTGTTCACCTCGTGTGTGTTCTCCAGGGCATGGCGGTAGCGGCCCGGTCCCAAGGcAAACACAAGCAGAGGATCTGGGTCAACATCTCCATGGCGGGCATCAAGATCGTCGACGAAAAAGCGGGAGTGAGTCCAGCCGCTTCCTCCCGTTGCCGCGGTGGCGTGTGTGTGTGTGTgCGCTGATGGAGCCGTTGTCCCTCAGGTGATCGAACACGAGCACCTGGTGAGCAGGATCTCCTTCATCGCCAGAGACGTGACGGACAACCGGGCGTTTGGCTACGTGTGCGGCACCGAAGGGCAGCATCAGTTCTTCGCCATCAAGACGGCACAACAGGTAACatgtatatatacaaaaataatatatatattttaaaaatatatgtatattaaaaaaaatatgtagaaattaaaaatatatatatatttagaaattaaaagatatgtattaaaaaatatatatgtatatattaataaaatatatatattgaaaattaGATATTAAAGATTCCATTCCGCTtcgtggggcgctggagccgaccccagctgacatagggcgaaggcATATTAAAGATATATATATTTTTTAAATACAAATTAAATATatatatactaccgttcaaaagtttgggatcacccagacaatttcgtgttttccatgaaaactcacacttttatgtatagaaaatatagtcaagacattgacaaggttagaaataatgatttgtatttgaagtattaatttttttttcttcaaactttgcttttgtcaaagaatgctccttttgcagcaattccagcattgcagacctttggcattctagctgttaatttgttgaggtaatctgttgaaatgtcaccccatgcttcctgaagcacctccacaagttggattggcttgatgggcacttcttgaggaccatacggtcaagctgctcccacaacagctcaatgggttgagatctggtgactggccactccattacagacagcaagctgcctgcttcttccctcaagagttcttgcacaatgtggaggtgtgctttgggtcattgtcctgttggaggaggacattggctccaatcaagcgctgcccacagggtatggcgttgcaaaatggagtgatagccttccttatttaaaatcccttttacctggtacaaatctcccactttcccagcaccaaagcagccccagaccatcacatgacctccaccatgcttgacagatggtgtcaggcactcttccagcatcttttcacctgttctgcgtctcacaaatgttcttctgtgtgatccaaacacctcaaacttgattcatctgtccagaacacctttttccaatcttcctctgtccaatgcctgtgttcttttgcccataccaatcttttcttttgattgaccagtctcagatatggctttttctttgccactctgcctagaaggccagcatcccggagtcgcctcttcactgtcgacgttgacactggcgttttgcgggtaccatttaaagaagctgccagttgaggacctgtgaggcgtctatttctcaaactagagactctaatgtacttgtcttcttgctgagttgtgcaccggggcctcccacttctctttctgctctggttagagcctgtttgtgctgttctctgaagggagtagtacacaccgctggaggacattttcagcttctttgcaatttctcgcatggaatagccttcatttctaagaacaagaatagactggcgagtttcacaggaaacttctttttttctggccattttgagagtcttatcgaacccacaaatgtgatgctccagataatcaactagctcaaaggaaggccagttttatagcttctcatcagcaaaacagttttcagctgtgctaacataattgcacaagggttttcaagggttttctaatcatccattagtcttctaaggcgattagcaaacacaatgtaccattagaacactggagtgatgatgaaatgggcctctatacacctatggagatatttcattagaaaccagacgtttccacctagaatagtcatttaccacattaacaatgtatagagtgtatttatgattgatttaatgttatcttcattgaaaaaaacaatgctttactttgaaaaataaggacatttctaagtgatcccaaacttttgaacggtagtgtatTATGTATATATGTATTAAAGAAACTGACAAGCGAGTCTTTCTCTGCAGGCGGAACCGCTGGTCATCGACCTGAAGGACCTCTTCCAGGTCATCTTCAACCTGAGGAAGAAGGAGGCGGAGGCCTCGCAGAAGGTAAACAGGGTTGACTTTAAAACGGGGAGAAACGCCTCTGGTGGTTATCGGGGGGAGTGCACCTCAACACTGGCCCTCTGTTCTCCAATGACTCGCGTCCTGACACACATTCCACTGGCGTGACGCCGTGACTTAAGATGAGTGGTTGTCTTAACAGTCCACCTCCTTGTTTGCAGGGGGAAAATGGCGTCGCCGTAGCTGAGGTAAGCTCTCGGCCCGCCACGCTGGTGTGTGTgCGTTTCCTCCTCTGACTCCGCCCCTCACCGTGTGCTTGTTCCACAGGACGGCGGTCCGGACGGCGGCGTGAAAGCGGCTCAAGTGAGTCGCGTCTCCACGTTTCTGACCGAGTGTTTGATCGCGGCTGGATGACCCGCTCTGCTGTGTGTTCCAGCCGGCGGAGCAGTTCGACCTCTTCGGAGACATGTCGACCCCTCCAGACGTCCAGGCCCCAAACGTAAGAGACGCCGTCACCCGGGCGGCGTGACGGGAGCAGACATTTACAGCGTTGAGCTTTTCAGGATGtagaaaacttcatgaatccccagtggggaaacaaattagccatcaagtcaaatagactaaaaacagACGAAACAAAAGCAGAAGACTCCCATAAATCAACAAAGAGGCTCAATAAAGAAAATCCTATAAAATTTCTAGAATATTAAGTTTTCGCCTCTTGGAAGTAATGTGTGTTTCTATGATTCATAAATAACCTCCCGGATCATTCCATGTGTGTGAGCTCCATTCTCAAAAGGCCCGATCCTATTGGCAGTGGGAGCGTTTTATAAATTATAAGATGCATATTTTAAGCTTAAAGGATCTTTTTGAGAATTGACTTCATTGTGTGTACCATCATTGTGTTTTCAAACCCTTTAAAGCTGCTCCAAGTAGAATGCATTAAAGCGACCTTTGGTGACCTCTACAGGTTAACACCGGTAGTGTTCTCAGTTGGAGTTTTTGCCGACTGGACATATTTGAGCACTTGGgTGTCCAGGGCGACTCCACTCATTGGACTCTAGCCTTTGATTTGACGTGCCGGTCGTTTGGTCTGGTCAACGTTCTGCAGGCAGCAGCTTTAAAGCTCCTCCCCCTCGCCATTTGTTTGTTTAACACGTGTTTCTCTCTCCTGCAGAACTGACTCATAAATCCATTTGTCTCTTCTCGTGTTAACCAGGTCGTCTCTAACGATATTCTCTTGCTGGACTTTTCCGCTGAAGTTGACAGCAATCAGAACTGCATCAAGGGCGACTCGTTGTCGAgTTCCTGTGGGCCGGACCGCGGCGCCGCTCCCCAGACAGAGAATCCCTTTTCCTCCCCGTTGGGCTACTTCCCGACCCCCGACAGCGACCCGTTCAGAGACGACCCGCTCGCCCAGCCGCCCGCCTGGTCGCAACTCGATAATTCCCACGCGTCGGCCGGTCTCCTGAACGGCGCCGCGCCGATCGTTAATAACGGCGGTTCGGGCGAGGACTCCGAACGCCTCGGCGAGCGGTCGTCCGGCGGGACCGTGCTCCTGGCGCTCGGTAACGGCCAGTGGCCACTAGGGGGCGCGGTTACTCGTTCCCTCGCCGCGGCGGACGGGATgGACTCGGGGACGGCCACGAACCCGTTTTTCAACCCTTTGAACGTCGTGCCCGACGGGGTAACGCATTACCCACAAGCCCCGGCGGCTCATAGCCGGGACTCgGTTGTCATAAGCCCGCCTCCGCAGAGCGGCAAGGCGGGACGGAGGAGCGCAAAGGTGAAGCTCCAGAGGCGGAGGCTGCATGTGGGGGTCGGGGGTCACGGCCCCCCCCTGCACGGGGGGTCGGGGGGGTGAAGCTTCTGCGTGTCGGTTCCCTCTGCATGctctctctctctctctcgctctcCTGAAGTGACTCTTTGTTTCTGCTCTAAATCTGTCTAACGTTCACGCTTCAGTGGTAAAGAACCGGTGAGTGGAAACGCATGAGCACAACTACTGCtgagtgtgtatgtgagtgtgttaacgtgtgtgagtggttaacgttgtgtgtatatgtgtgtgtggttaacgtgtgtgtggttaacgtgtgtatatgtgtgtggttaacattgtgtggttaacgttgtgtgtgtggttaacgtgtgtgtgtggttaacgtgtgtgtaacgttgtCTCCTGTGACCAGGCCGTGGTGAGCGACCCGTTTGGAGGCGAGCTCTTCTCGGCTCCGGGTCCCTCCTCGTCTTCCTCCTCGGGCGACTTCTTCACCGCTTCACCTCCGGCCTCCATCGCCGCTCTGGGTACGTCACCGGGAGGCGACATGGCGCCTGGTGTCGTCGTGTGTTTCTGATGCCTTTTCTTCTTCTGTGTTCAGGGAGCCTTCAGTTGGCTCCTCCCGCTGCGGCCGGCGGGTGGGGGGCCTCCATGGCTCCGCCTTCAATGTTCCCCGTGCCCGGCGTGGCTCCAGGCCCCGCCTACCCGCACCCGTCTGCCTTCGGCGGCCTCCCCATCCCGCCGCCGGTCTGGGGGGCGCAGGGCCCCGCCCACTTTAGTGCCGCGCCCCTATCTCCGCCCCGCCTCAACTGGGGCCAGCCGCCGCCCGGtGCCCCCGTGTGGGGTCAGCCCGTCGTGACCAATCCGTTCCAGCCGGGTCCGTTCCCCGCGATGGTCGACCATCACGGgccggcgcgcccgcctccccggccgcccgGCAAGGAGCCGGCGGCGCCGCCGAAGGTGGAGAACACCGCCTTCACGGCTCTGGACCCCCTCGGCGACCGCGAGAAGAAGACCGGAAAGGACATGTTCAAGGACTTCCAGATCGCCAAACCGCCCGCCATCCCGGCGAGGAAAGGGGAACACGTGGGCGGCGCCGAGGCCATGAGCGGCGACGCCGGCGCCTTCGACCAGTACTTCAACAGCAAAGTGGGGCTGGTCCAGGACCACGaCGACCACGACGACTTTGACATCAATCGGATGTCGGCGGCGGTTCCCGGTAAAGCGACTTCCTGCCACCGCCTCGCCCCGATGCGAGCGCTCTGTTGTAACGTTTCCATTGCCCCCCcGACCAGCTGCGGCTCCCAGCTTCAGCGCCGGCCTCCTGGACGCAGCCCTCGCCAACAGCTGTGCGCtGGTCCAGGGACCCGACCAGGACGTGTTCGACCAGGCCTTCGGGGCGCCGCCTGCAGCCGCGGTACAGACGCGTGGATGCGTGTTTGAAGGCCCGTCGGCAGCAACAGAATCCCCTCATGTCTCGTTCCTCTCCCTCCAGCAGCCGGCGGCCTCTGCCTTCGGGGATCCTTTTGGAAACCCCTTTGCTATGTCTGCAGAGGTGGAGGTCGGAGCGCCCGTCTCCGCCGAGCCCGCCGTCTCGTCCCCATCGGCCGGCACCCCCCCCACCTCCCCGACGACGGCCGCCTCCAAGGTCCCGTTCAAGAAGAAGAAAGCCCCGGAGAAGACCGACGAGTACCTGCTGGGCCGTTTCCAGGGCGACGGCGTGCGCTACAAGGCCAAGCTGATCGGCGTGGACGACGTGCCGGAGCCCCGCGGGGACAAGATGTCCCAGGACTCCATGATGAAGCTCAAGGGCATGGCGGTAGCGGCCCGGTCCCAAGGcAAACACAAGCAGAGGATCTGGGTCAACATCTCCATGGCGGGCATCAAGATCGTCGACGAAAAAGCGGGAGTGATCGAACACGAGCACCTGGTGAGCAGGATCTCCTTCATCGCCAGAGACGTGACGGACAACCGGGCGTTTGGCTACGTGTGCGGCACCGAAGGGCAGCATCAGTTCTTCGCCATCAAGACGGCACAACAGGCGGAACCGCTGGTCATCGACCTGAAGGACCTCTTCCAGGTCATCTTCAACCTGAGGAAGAAGGAGGCGGAGGCCTCGCAGAAGGGGGAAAATGGCGTCGCCGTAGCTGAGGACGGCGGTCCGGACGGCGGCGTGAAAGCGGCTCAACCGGCGGAGCAGTTCGACCTCTTCGGAGACATGTCGACCCCTCCAGACGTCCAGGCCCCAAACGTCGTCTCTAACGATATTCTCTTGCTGGACTTTTCCGCTGAAGTTGACAGCAATCAGAACTGCATCAAGGGCGACTCGTTGTCGAgTTCCTGTGGGCCGGACCGCGGCGCCGCTCCCCAGACAGAGAATCCCTTTTCCTCCCCGTTGGGCTACTTCCCGACCCCCGACAGCGACCCGTTCAGAGACGACCCGCTCGCCCAGCCGCCCGCCTGGTCGCAACTCGATAATTCCCACGCGTCGGCCGGTCTCCTGAACGGCGCCGCGCCGATCGTTAATAACGGCGGTTCGGGCGAGGACTCCGAACGCCTCGGCGAGCGGTCGTCCGGCGGGACCGTGCTCCTGGCGCTCGGTAACGGCCAGTGGCCACTAGGGGGCGCGGTTACTCGTTCCCTCGCCGCGGCGGACGGGATgGACTCGGGGACGGCCACGAACCCGTTTTTCAACCCTTTGAACGTCGTGCCCGACGGGGTAACGCATTACCCACAAGCCCCGGCGGCTCATAGCCGGGACTCgGTTGTCATAAGCCCGCCTCCGCAGAGCGGCAAGGCGGGACGGAGGAGCGCAAAGGCCGTGGTGAGCGACCCGTTTGGAGGCGAGCTCTTCTCGGCTCCGGGTCCCTCCTCGTCTTCCTCCTCGGGCGACTTCTTCACCGCTTCACCTCCGGCCTCCATCGCCGCTCTGGGGAGCCTTCAGTTGGCTCCTCCCGCTGCGGCCGGCGGGTGGGGGGCCTCCATGGCTCCGCCTTCAATGTTCCCCGTGCCCGGCGTGGCTCCAGGCCCCGCCTACCCGCACCCGTCTGCCTTCGGCGGCCTCCCCATCCCGCCGCCGGTCTGGGGGGCGCAGGGCCCCGCCCACTTTAGTGCCGCGCCCCTATCTCCGCCCCGCCTCAACTGGGGCCAGCCGCCGCCCGGtGCCCCCGTGTGGGGTCAGCCCGTCGTGACCAATCCGTTCCAGCCGGGTCCGTTCCCCGCGATGGTCGACCATCACGGgccggcgcgcccgcctccccggccgcccgGCAAGGAGCCGGCGGCGCCGCCGAAGGTGGAGAACACCGCCTTCACGGCTCTGGACCCCCTCGGCGACCGCGAGAAGAAGACCGGAAAGGACATGTTCAAGGACTTCCAGATCGCCAAACCGCCCGCCATCCCGGCGAGGAAAGGGGAACACGTGGGCGGCGCCGAGGCCATGAGCGGCGACGCCGGCGCCTTCGACCAGTACTTCAACAGCAAAGTGGGGCTGGTCCAGGACCACGaCGACCACGACGACTTTGACATCAATCGGATGTCGGCGGCGGTTCCCGCTGCGGCTCCCAGCTTCAGCGCCGGCCTCCTGGACGCAGCCCTCGCCAACAGCTGTGCGCtGGTCCAGGGACCCGACCAGGACGTGTTCGACCAGGCCTTCGGGGCGCCGCCTGCAGCCGCGGTACAGACGCGTGGATGCGTGTTTGAAGGCCCGTCGGCAGCAACAGAATCCCCTCATGTCTCGTTCCTCTCCCTCCAGCAGCCGGCGGCCTCTGCCTTCGGGGATCCTTTTGGAAACCCCTTTGCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21792	DAB2_SBM	Disabled homolog 2-like, sulfatide-binding motifs	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006020	Domain	PTB/PI domain	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR048559	Conserved_site	Disabled homolog 1/2, sulfatide-binding motif	Interproscan
IPR048561	Domain	Disabled, phosphotyrosine-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47695	PID DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006898	Biological Process	receptor-mediated endocytosis	Interproscan
GO:0045807	Biological Process	positive regulation of endocytosis	Interproscan
GO:0090090	Biological Process	negative regulation of canonical Wnt signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-