Gene detail

Detailed information of HS13378 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS13378	G-PROTEIN COUPLED RECEPTOR	chr15	19470881	19474814	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS13378

ATGGGAAAGCTGCTTCTCTTCTTCCTGGTGGCCGCTTTCTGTCAGAGTGCTTCTCTTCAAAGGAAAGGTACGTTTCATTACAGATGTTTCCTTTTTCATGTCTTACCTTTTTTTTACAATGGACTTATTCTGAAACATTCCCCTTGACTGCCttgagcagattatacatgcgcgatgatgtggattgtattgttatatatatatatatatatatatatatatatatatatatatatatatatttatatatatatatatgaatataattagttgattctgaaggaaacgAGGGATCTTTGTCTCATCAGtggtggtggaaagtaacttagcacatttactcaagtactgaacttactataaagtatcgtacttgtactttacatgagtatttccatttaatgctactttatgcttctactccacaacatctcagagataaatattgtactttttacAGCTTTAGTTTCTTCTCAGATGATGTTTTTCATCTTTTCCTCTCCAGTGAAAAACTCGTATATATATtgtagcgaccctgggtcaggaacgctacgagacgtagatggcttatagggtgtttattcagagaacatagaacaagctactgttggccgtagcctacgccaaaacccccgcaaaacgccgtgaaaacctccaaaccagcttcacgtctgctccgggtcatagctctgctccgaacgagtcgtaacacaacaacacacacacaacaacatcactcgctgtccaatcacagacacgcctcacagctaccagctcgtgagacgttcacttacatccggaacataacatttataacataacattccctcagtccgttacaataTATATATATCAGTGgcgggccgtgggcctggggcctgggccttcagtgaggtcctacacagtcccacccgaattaatccacctcttattactatcattatgatgccatggctctagaccagggctgctcaatacctcgatcgcggcgtagtattggtagatcgcatgacataaaaaaaattggcccgcccccgtcattttctctatagcacgtctttgtttatttattaaactaaacagccgtctgatgttgatcgtatctacacaacagcatgtcatttctctcggctccgtctcgcgcgctgcagaatgcgcgcatcatgacggagaaaaagaagaagaaaaaagtcacttgcactagtttgttcactaaacagggcattgtcgcacccaaagcagatttcaagtatatgctcgaccaaatcgacatcttctcctccttccgccattgtgggttgaaaaaacagctttgtagtccgcgaattaattcctttatcaaattcagtttcctagttctgaggttctgcatctacctgcccataggacccgcctctcaatattggtaatccaatcaaaagacgtgcagcactccgcctgctagctggctcctgtgccggttccggggccttctcgaaggcctagaggagccaactctaaagctgattggttgacacaacattgtcattcccattcacttgaagctaccagcgcccgcaatgttgattctgaaggcctaagggcagattttagccccctggcaacacacgatggctgaatatgattggataaaagatctaacataaagaccagccctccaaatctcaacctggcgctggcagcagcgcaaccaagaggaacgctatgaaattaagagaataattcttactctggggaataattgaatacatatttgtgggaaaatatatttagaaaaaaatatatattctgatgatgtttaggccagcagagaaggccttgctggccctgacggcccgccactgATATATATATATATAGGTTAATGTTGAATGTTTGTGATCAACTGAAAGATGAAGTGTTGAGAAGCTCCTCCtccttcttcaaataaataaagtgtttaaaaagcctcttggatcagctggaagatgcatcgtcacagagctgctggttctttgtagagatacgaggttctcacaggacagagactacaaacgtacgatgagtttatggaatatgatgcattgatgtagatttaactagacaacaggatatagaggagttaacatgaaatacacattaatgcagcaggaatattaatccagaaaCACCAGATATGAGAAAAACACTAACAGGGAACATTTTATTGCACAATGGGTACTTTTATCAACAGATGTTTCTCTGGAAAATCAAGTTTTAGTTCCCAAGATGTTTTATTATCGAGATCACGGCTGAAACAAAAAGCTGCGACTTCATCTTCGGCTTCAGACTGTTGATCAGATCAAACTGAAGGCGTCACTttaacccttgtgttgccttcgggtcattttgacccgaatcaatattacaccctccccccgttttaggattaatttgaccccattcaatgtttaatgtcggtgttctttcggtagtcaacaaacaaacataaagtgcctcacacttaaacttggaaaacaatattaattctaataattttctggaggttttaattgctggcgtcaaattgaacccaaagggtaaaatatgttagtaaatataaaggtaacaggagggtgaaacattgaatcgggtcaaaatgacccaaaggcggggggagggtgtaatattgattcgggtcaaaatgaccctaaggcaacacaagggttaagaaacatttcatagaatcaGTTACCGAGGAAATAATCAACCAAAGCATAATGAAtATTGTTTTTAGCCGCCGTCTCATTGGTGTGTTTCCAGTGATTGTGACCCGATGCATTTGAAATGTATCGAGATGGAAAACTGTTGCGTAACAGTGTAATAACTTGTGCATGTTGTTGTTGTTGCAGAGAAAAAGAGAAACGGAGTGGaCGGCAGCAGCTCGGTGGTCGTGGTCGCGAGGCCCAGAACATTTCCCGGtGAgACGTTTCAGCCCGACTTCCTCCCGGCGCTGAACGGGACTCAAGCCCCCGGTTCATCTCACTCCCTTCCGGCACTGTATCACCTCGGCAACGGCACAATCGACTACCTCCGCGGCGCCCTGAGCACGCGGGTCATCCCCGTCGTCTACACGCTGGTCGTCGCCGTGGGGGTCCCCGCCAACGTCGCCATCTTGTACgCGCTGGCCTCGAAGATCAGGACGGTGTCCTCCGCCATCCTCTACTGCAGCCTGGCCGTCTCCGACCTCTTCCTCCTGCTCTCCCTCTTCTTCAAGGCCCACTACCATTTCCACGGGAACCACTGGACGCTCGGCGAGGCCGCCTGCCGGGCGGTCACCGCCTGTTTCTACGGCAACCTCTACTGCTCGGCCCAGACGCTGGCCTGCATCGGCGTCAAGCGCTACCTGGCCGTGGTGCACCCGTTCACGTACAAGAGCCTCCCCAAGAGGACGCTCACGGCCTGGGTCACCGCGGCGGTGTGGGGGGTGTTCGGCGCCGCCGTCCTCCCCGAGCTGCTCGTCCGCCAGAGCTACTGGATCCCCCAGTTGGGCCGCACCACCTGCCACGACGTGCTGCCCCTGCGCGACGACTCCCACCGCTTCCTGCTCTACTACAACCTGCTCCTTGGCGTCTTCGGCCTGCTGGCGCCCCTGGTGGTCACGGTGGCGTGCTACGGGCGtATCGTGCGCGAGCTGAACCGGTCGCACCACGACTGGGCGATGTACATCAAGGCCAGCTCaCTGGTGCTGGCCATGTTCCTGCTGTGCTTCGCCCCAGCCGGGGCGCTGCACTTCCTGCACTACGCGCGcCTGTTTTCGGACGGGGCGGCGAGTTTGTACGTGGGCTTTAAAGCGGCGGTGTGCTTGTGCTGCGTCCACGCCTGTCTGGACCCCTTCTTCTTCCTCCTCATGTCCAAGTCTGCAGGCTCCAGGGTTTACTTTCGGGCCTTTAAGGGCAAGACCCTCAGCCTGTCTGTGATGGGAAAGCTGCTTCTCTTCTTCCTGGTGGCCGCTTTCTGTCAGAGTGCTTCTCTTCAAAGGAAAGAGAAAAAGAGAAACGGAGTGGaCGGCAGCAGCTCGGTGGTCGTGGTCGCGAGGCCCAGAACATTTCCCGGtGAgACGTTTCAGCCCGACTTCCTCCCGGCGCTGAACGGGACTCAAGCCCCCGGTTCATCTCACTCCCTTCCGGCACTGTATCACCTCGGCAACGGCACAATCGACTACCTCCGCGGCGCCCTGAGCACGCGGGTCATCCCCGTCGTCTACACGCTGGTCGTCGCCGTGGGGGTCCCCGCCAACGTCGCCATCTTGTACgCGCTGGCCTCGAAGATCAGGACGGTGTCCTCCGCCATCCTCTACTGCAGCCTGGCCGTCTCCGACCTCTTCCTCCTGCTCTCCCTCTTCTTCAAGGCCCACTACCATTTCCACGGGAACCACTGGACGCTCGGCGAGGCCGCCTGCCGGGCGGTCACCGCCTGTTTCTACGGCAACCTCTACTGCTCGGCCCAGACGCTGGCCTGCATCGGCGTCAAGCGCTACCTGGCCGTGGTGCACCCGTTCACGTACAAGAGCCTCCCCAAGAGGACGCTCACGGCCTGGGTCACCGCGGCGGTGTGGGGGGTGTTCGGCGCCGCCGTCCTCCCCGAGCTGCTCGTCCGCCAGAGCTACTGGATCCCCCAGTTGGGCCGCACCACCTGCCACGACGTGCTGCCCCTGCGCGACGACTCCCACCGCTTCCTGCTCTACTACAACCTGCTCCTTGGCGTCTTCGGCCTGCTGGCGCCCCTGGTGGTCACGGTGGCGTGCTACGGGCGtATCGTGCGCGAGCTGAACCGGTCGCACCACGACTGGGCGATGTACATCAAGGCCAGCTCaCTGGTGCTGGCCATGTTCCTGCTGTGCTTCGCCCCAGCCGGGGCGCTGCACTTCCTGCACTACGCGCGcCTGTTTTCGGACGGGGCGGCGAGTTTGTACGTGGGCTTTAAAGCGGCGGTGTGCTTGTGCTGCGTCCACGCCTGTCTGGACCCCTTCTTCTTCCTCCTCATGTCCAAGTCTGCAGGCTCCAGGGTTTACTTTCGGGCCTTTAAGGGCAAGACCCTCAGCCTGTCTGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR003912	Family	Protease-activated receptor	Interproscan
IPR003943	Family	Protease-activated receptor 3	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24232	G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007596	Biological Process	blood coagulation	Interproscan
GO:0015057	Molecular Function	thrombin-activated receptor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0035025	Biological Process	positive regulation of Rho protein signal transduction	Interproscan
GO:0051482	Biological Process	obsolete positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway	Interproscan
GO:0070493	Biological Process	thrombin-activated receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-