Detailed information of HS12827 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS12827COMPLEMENT COMPONENT C6chr1524660302478782-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF01823MACPFMAC/Perforin domainDomainInterproscan
PF18434Kazal_3Kazal-type serine protease inhibitor domainDomainInterproscan
PF21330C7_KAZALComplement component C7, Kazal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001862FamilyMembrane attack complex component/perforin/complement C9Interproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR003884DomainFactor I / membrane attack complexInterproscan
IPR020863Conserved_siteMembrane attack complex component/perforin domain, conserved siteInterproscan
IPR020864DomainMembrane attack complex component/perforin (MACPF) domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR040729DomainKazal-type serine protease inhibitor domainInterproscan
IPR048825DomainComplement component C7, Kazal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45742COMPLEMENT COMPONENT C6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005579Cellular Componentmembrane attack complexInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0006956Biological Processcomplement activationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP