Detailed information of HS12694 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS12694UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3chr141136514511390065-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03987Autophagy_act_CAutophagocytosis associated protein, active-site domain DomainInterproscan
PF09004ALKBH8_NAlkylated DNA repair protein alkB homolog 8, N-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR007135FamilyUbiquitin-like-conjugating enzyme Atg3/Atg10Interproscan
IPR015095DomainAlkylated DNA repair protein AlkB, homologue 8, N-terminalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR046962FamilyAutophagy-related protein 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12866UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000407Cellular Componentphagophore assembly siteInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0016706Molecular Function2-oxoglutarate-dependent dioxygenase activityInterproscan
GO:0019776Molecular FunctionAtg8-family ligase activityInterproscan
GO:0019787Molecular Functionubiquitin-like protein transferase activityInterproscan
GO:0044804Biological ProcessnucleophagyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP