Detailed information of HS11855 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS11855HELICASE SRCAP-RELATEDchr131102582111054436+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF07529HSAHSA domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014012DomainHelicase/SANT-associated domainInterproscan
IPR017956Conserved_siteAT hook, DNA-binding motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR050520FamilyINO80/SWR1 chromatin remodeling helicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45685HELICASE SRCAP-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan
GO:0043486Biological Processobsolete histone exchangeInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP