Gene detail

Detailed information of HS11615 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS11615	DEPHOSPHO-COA KINASE-RELATED	chr13	4920898	4925971	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS11615

ATGTCCATGTTCAGCACGGGCATCCTGGTGCTGACGTCTCCTCTCCACACCCTCCACTTGCGCATCGCTCCAGTGCTCAGCTCAGCTGCTCAGCTTGTGGAGCGCACACTGTACGTCCACCTCCACCCTGGGCTGAACTTGGGCAATGGGAGCCAGCCTCGAGCAGTTTTCATTCCACCTGTAGTGGACCTGTCTACAATCATTTCCCGCCTTCACAGCAATGCAGCAGACATATGCGGGCACCTGAATGTTCAAGTGTTGCTGACCAATGTTCATGCTCAGTCAGCCTCGCTCCCGAACTGCCCCTTCCCCACACCGCAATCTCTGGCTCACCCCCCGGAGGTGGTGCTGACAGACTTTCCTCTGCAGGACCCGAGTCAGTCCCATCAGGTTACGCAGTCTCTGCAGAGGTACACAGGCCACTGCTACGTCTGCAGCCCCAGCCTGTCCTCCGTGCTGCTGCATCCACTGCTAATGAGGCTGCAGCCGAATGAGGAAGAGCTTAAAGTGCCTGAAGAAGAGTCAGAACCCTTGCAGACCTACAGTGACGTGGTGGTAGGGGGGACGTTCGACCGGCTCCATGGGGCCCACAGGACGCTGCTCAACATCTCATGCCTGTTAGCCAATCGAAGGTTCCTTATTGGGGTGTGTGACCACGCAATGCTGAAAAGTGAGTCCTTCATTTTTGGAACGTGTATTCATGTCATTTCTTTGAGGCTAATGATGAAAAGGCGGCACCCTCTCCCCGCATAACATCCTTTTCTTCCCGGCTCAAGGGAAAGTGCTAAAGGAGCTGGTCGAGCCCTACTCTCTGCGGACCCAGAGACTACAGGAGTTCCTGCAAGACATCAAGCCCTCACTGCAGGTGGAGATCGTGCCCCTTGAAGACCCCTTTGGAGTTTCTGTGGTTGACCCCTTGCTGCAGTGCATCGTGGTCAGTGAGGAGACGAAAAGGGGAGGCGAGGCTGTCAACAAGAAGCGCATTGAGAACGTGAGTCACGAAAACACCGATACGTGTTGTGCCTTCCCCACTGTTTTTTGTTGTTTGGACTAACCATTTTTTGAAATGCATACAAAATGATCCACTGGAAAAGTTACTAAAttaaccctcctgttaactttacatttactaacatattttaccctcggggtcaatttgaccccagcaattaaaacctccagaaaattattagaattaatattgtttcccaagtttaagtgtgaagtactttatgtttgtttgttgactacctaaatagccctttcaatatataaaaaagttgttatttcttatatgtttgacacagtgaaaaacagcctggggtcaaattgaccccaaagcacaccgacattaaacattgaatggggtcaaattgaccctaaaggtaacaggagggttaatcatactgtGTTATTTGTGTTTTTTTATGATCTACAGCTGATTTTAAATGCAGCATTGTTTCTAATACAACTGTAGTATAATTAACATTTTGCCTAATTAAAGTTTTCTTGGGCATAATGTGTATGCCGCAGATAGCCTTTTTTAACGCCTGATGCCTATGTCGGTACCATTTGAAAAATTTTAAGTTGTTCTTCCCCGCTACATGTTTGTGTATGGGTGTTTTTAAATGTAGAtCTGTCCTTTTTATTTTTTTATGTTAGGACATATTTTTAAGAACTGCAGTGGAAAGAAAAGCACAGGAGATAGTTTGAGTACACATTTTTAACCTGGGATCGCAGGAGAACTTGTTTTTCCAGAAATAGGAAACCCTAGCCTACACATGAGTACATATTTGATGTGTTGTGTTCTCTGCTTCCTAAACCAGGGCTTTCCTCCTCTCATCCTTCACGAGATCCAGTTGCTTAAAGATGCCCATCACACTGAGACAGAGGAGGAGAAGATCAGCTCCTCCAGTCTCCGCTCTCGTCTGCTGGGTACCCTCCTTACCCCGCCAAAAGTAGGTCATTTAAAATTGTAATTAAAAAGGATATAAATAGTGGTATTATAGCAGCATTATGGAAATCCAACAAAACTAATATATATAATTAAAATATATATTTTAAAATTATTTCCATATCATGAAAAAGTGTTGTCATACCTTTTTATAATCATGCAACCTTTCTTTCAATTAAAGTGTTCAATAAAGTGTATGCCTATGAAGAAGACAAAACCATTTTAATTGTATTATATGTTaAAAAAAATTaAAAAAATAAAAAGATGTATAACTTCATAAcaagtttatttttatagcaattttcaacaaggccattcaaagtgcttcacataaaacGTgttctgaccacaccagaggaccagctgttcgacctcccgtctgtacgcagactctgttccTGtTGAGGTCGATGATCGTTGTGTCAAATGTTGAAAAAACTCTGCACAGCCTCCAGCCACCAACATGTAATCTTACAAATCATGCTCCAACTTGCATTAGATTTTTATTTTTGTCAACACGCAACTCATTTTCTCGCAGCATTTGAGCTGAAGAGTGTTTTCATGCAAACGCTGACGGAGAGCATTTTGTAGCAACGTCTTAATGTGTAACTTGTTCTAAAGGGAGCCAACTTATTCAGGTAAAAAAGTAATAGCTTTTCTTTCCAGTACATGccaaagtacaatgtctttaacccttgtgttgccttcgagtcaatttgacccgattcaatgtttcaccctcctgtcgccttcgggtcaatatgacccgattcaatgtttaaccctcctgttacctttatatttactaacatattttacccttgaggtcaatatgaccccagctattaaaatctccagaaaattattagaattaatattgttttccaagtttaagtgtgaggtactttatgtttgtttgttgactcccgaaagaacaccgacattaaacattgaatcgggtcaaattgacccgaaggcgacaggagggtaaaatattgaattgggtcaaaatgacccgaaggcaacacaagggttaaggacCAAGCAGAGAATGTTGTGTGTTGGGAGTAGAAACGAAAGACCAGTTCCCCAATTATCAGGTTGACTGGAAAGGAAGTTGTGGAACAGATTGTGTCAATGAAAATTATGAAATGTACATGATTTGGGTGCGTTCTCTTTGTTTGACCGTTGCCGAGAGATTATTATGAAAAAGTATCTCTGAGGAGGCCTGACTTGTTTGTGTGATCGTCCTATCATCGCCTCCACCCGTACATTCTTGGTGCCGTCATGTTTAGCGCCGCAGCGTTCGGTCCTTGTCTCCACTGTTTACTCTGCGCTAGGACGCGTCCCATCTCGCTCCGCTTCCATACGTGATCGGCCTGACGGGAGGCAGCGGCAGTGGAAAGAGCTCCATCGCCGGGCAGCTGGAGGcTTTGGGTGCCGTCCGGATCGACTGCGACAAGCTGGGCCACGAGGTGTACCAGCCCGGCACTGCAGCCTACCACCGAGTGCTTGAAGAATTTGGGTCAGGTGAGGAAACTCATTGTGTGCTGTGGGGAGGGAGATGCATCTCCTTATGATACCTCACACTCTATCCATTTACTTCTAGGACTATGATGCATCTTTGCATTGGCTTGAGTTTCGTGTTAAATGTTCTGATGCCTGAAATATCCGGTGTTGCAGTGCAATAATATTGTTTTATATTTGTCACTTTTAGATCTTCTGAACGAGGATAAAACTATCAACAGACGTGCATTAGGAAGAAAGGTTTTTGGAAAGCAGGTAATGGGACAAGTAGTAGCACATCACATAGAATACACCACAGTGTCCGGACCAGTCACcGATGGTGCTGTTTCACATGCAGGAGCGGTTAAAAGCACTCACAGATATCGTATGGCCTGAGATTGCACTTCTGGTGGAGAACAGAATCAGCCGAGCCAGAGAGGAAGGTATTGTATGAACTTTAAAATGTATAAATCGTAGAACTCAACATGTCCCTAGTATTTGAGGATAAAGGCTGTTTGTGTTAAAGTGTTTAGTGTTGTGTGGCAGTAAAATAGTCTTTGTGTTCATGCAGCTCTTTTCCTTTGCCTTTCGtTTGACTGATGTACTAAATGTATAAAGAGGCCGTGCCATCGCGTTCTACCTGGAGAGATTCCCACCATGTGCGTGTGATCTTTTGCAGGTAAGCAGGTTTGCGTGTTGGATGCTGCCGTTCTTCAGGAGGCCGACTGGACATGCATGGTACACGAGGTCTGGGTCACAGTCATCCCTGAGGAGGAGGTAATGCGCAACaaacatggagttgtgacactttgtgtgcgtgtgtctctgtgtgtgtgtgagagagagagagagagagagagagagactatcgccatgcattgtTGTCATCCTTATTTTGCTTTTCGTAAAATACCACTGGGTGGGTGCTAAGAAATCCGTAGTTTGGGATTCTACACACACTGGCTTTAAGACAAAAAACGCTCCCCTTGTTTCCCTAACTTACATtgttctgagaaagtgactttttatttgtttttatctgatggagcaatctggtttgactcaaagtgaatgcaatattctttattttattgatttgaaaaagcacagagtcacaggagtcacacaaagttgttatttcaatacaaattcagcgtggaacattgagttacaattttgttcgggcggtggagcacgaacatttttcttcctccgaagtggggcgtgacaCATCTGCCTCCCCTCGTCACCCCTCCCCTCTCAGGCGGTGTTAAGGATATCGAAGCGAGACGGTTTGACCACAGAGGAGGCCCTGCGCCGTCTGCAGAGCCAGTGGTCCAACAGCAAGCAAGTAGCGCACGCCAACGTTGTGCTCAGCACGCTGTGGGAGCCAGAGGTCACTCGGAAACAGGTCCAGCACTCGGCATGCCATTAGTATAGCTTCTGCACATCTGCAATACGTGCAATTACATGATCGTGAAATGCAAAGTTAAATTACTCCTGTGGGAATTCTCCCACTCTTTTATTTTGTAGGTACTGAAAGCTTGGAATCTCCTTCAGAAGAGGATACAACAGAGACCAGAGGGCCATGTGGTCCCGACATCATCTCAGCTGATGTCCATGTTCAGCACGGGCATCCTGGTGCTGACGTCTCCTCTCCACACCCTCCACTTGCGCATCGCTCCAGTGCTCAGCTCAGCTGCTCAGCTTGTGGAGCGCACACTGTACGTCCACCTCCACCCTGGGCTGAACTTGGGCAATGGGAGCCAGCCTCGAGCAGTTTTCATTCCACCTGTAGTGGACCTGTCTACAATCATTTCCCGCCTTCACAGCAATGCAGCAGACATATGCGGGCACCTGAATGTTCAAGTGTTGCTGACCAATGTTCATGCTCAGTCAGCCTCGCTCCCGAACTGCCCCTTCCCCACACCGCAATCTCTGGCTCACCCCCCGGAGGTGGTGCTGACAGACTTTCCTCTGCAGGACCCGAGTCAGTCCCATCAGGTTACGCAGTCTCTGCAGAGGTACACAGGCCACTGCTACGTCTGCAGCCCCAGCCTGTCCTCCGTGCTGCTGCATCCACTGCTAATGAGGCTGCAGCCGAATGAGGAAGAGCTTAAAGTGCCTGAAGAAGAGTCAGAACCCTTGCAGACCTACAGTGACGTGGTGGTAGGGGGGACGTTCGACCGGCTCCATGGGGCCCACAGGACGCTGCTCAACATCTCATGCCTGTTAGCCAATCGAAGGTTCCTTATTGGGGTGTGTGACCACGCAATGCTGAAAACTCAAGGGAAAGTGCTAAAGGAGCTGGTCGAGCCCTACTCTCTGCGGACCCAGAGACTACAGGAGTTCCTGCAAGACATCAAGCCCTCACTGCAGGTGGAGATCGTGCCCCTTGAAGACCCCTTTGGAGTTTCTGTGGTTGACCCCTTGCTGCAGTGCATCGTGGTCAGTGAGGAGACGAAAAGGGGAGGCGAGGCTGTCAACAAGAAGCGCATTGAGAACGGCTTTCCTCCTCTCATCCTTCACGAGATCCAGTTGCTTAAAGATGCCCATCACACTGAGACAGAGGAGGAGAAGATCAGCTCCTCCAGTCTCCGCTCTCGTCTGCTGGGTACCCTCCTTACCCCGCCAAAAGACGCGTCCCATCTCGCTCCGCTTCCATACGTGATCGGCCTGACGGGAGGCAGCGGCAGTGGAAAGAGCTCCATCGCCGGGCAGCTGGAGGcTTTGGGTGCCGTCCGGATCGACTGCGACAAGCTGGGCCACGAGGTGTACCAGCCCGGCACTGCAGCCTACCACCGAGTGCTTGAAGAATTTGGGTCAGATCTTCTGAACGAGGATAAAACTATCAACAGACGTGCATTAGGAAGAAAGGTTTTTGGAAAGCAGGAGCGGTTAAAAGCACTCACAGATATCGTATGGCCTGAGATTGCACTTCTGGTGGAGAACAGAATCAGCCGAGCCAGAGAGGAAGGTAAGCAGGTTTGCGTGTTGGATGCTGCCGTTCTTCAGGAGGCCGACTGGACATGCATGGTACACGAGGTCTGGGTCACAGTCATCCCTGAGGAGGAGGCGGTGTTAAGGATATCGAAGCGAGACGGTTTGACCACAGAGGAGGCCCTGCGCCGTCTGCAGAGCCAGTGGTCCAACAGCAAGCAAGTAGCGCACGCCAACGTTGTGCTCAGCACGCTGTGGGAGCCAGAGGTCACTCGGAAACAGGTACTGAAAGCTTGGAATCTCCTTCAGAAGAGGATACAACAGAGACCAGAGGGCCATGTGGTCCCGACATCATCTCAGCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01121	CoaE	Dephospho-CoA kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001977	Family	Dephospho-CoA kinase	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10695	DEPHOSPHO-COA KINASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004140	Molecular Function	dephospho-CoA kinase activity	Interproscan
GO:0004595	Molecular Function	pantetheine-phosphate adenylyltransferase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0015937	Biological Process	coenzyme A biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-