Gene detail

Detailed information of HS11453 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS11453	ACID PHOSPHATASE-RELATED	chr13	1547076	1553895	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS11453

AACAAGATGTGGAAGTTCCAGGAAAGTTTGGGCTGTTTGTTGCTCCTCTGCTGCGTCTGCTTCAACGAGTGCCGGGTCCTGAAGTTTGTTGTGGCTGTaagtcagtctctctctctctctctctctctctctctctgaaatcatctagcgctatacacactttctttagatcacacacgactgacattacCACACGTTGTCTCTGTTTACACTGCATGTCCTGCTCACTGAGCATAATTAaATTTACACTTTAAGCCTGAACTCCAGTGTGAGCATATCTCACTGAGACAGACCTCAGCACATCTTTCTTCCACAGCTCAATGAATAATTGAAGGATTTCTGTGAAAATCTCAAATGTTTTGATGCAACCTCATATATTGAAGTAGTGTATATATATTTAGACACACACAACAGACATACGGTAGCTTGAAAGTTACTTATCCTACCAAAGTCAGGAtAGGTTCACGATGCGGTCTAGGTGTTACATTTGAGTGTTAACTGTCTCATAAATCTGTTATTATCCTGGTtAATTGAATTATTTTATGTAAATGTAACTTTTTTGcGAACAATGTATTGTTTAAATCAGTTTGGACTATTCTTATGTGTCAAGTTTAGTTTGGATTAGCTCAGGTTTTAATCTCATGAAGCTGTTATgCATCATTTTTGAAAACATCATTTATCTCTAAGCTTGTTGACTTGGTGACACAGAGGAGTGACTCAGATGTTTTCATAGTCGAGTTCATCCGACCTGCGTTCAGGTcCATGATACCGATGGAGCATCTCAAATCCAGAGCTCCAGGTCTCAGGTGTTTCTTTccttaCGTACACAGTGAAGAGGCCCAGCAGCTTTATCGTCGACTCATGACAGAGTTACATCTGGATCCATGGGATATTATTATTtTGACTTTCCAGGTGTTCCGACATGGCGATCGATCGGCCGTTGAATCGTATCCCAGaGATCCTCATGGGGAGAAAGTGTGGGCTCAAGGCTTCGGACAGCTGACTGAGGTACTGGGTGTTACtgcgtgtgtgtgtgcgtgtgtgtgagtgtgtgtCATAGATATTTTGTCAAGCAGGATTTGGCAAACAAACAACCAAATATGAAGAACTTTTAGATGTATATAGTGTATACAATCCATCACATTTTCTGGATTACTTacagaaaccaacaagaaaaaacaaaatataacaataaaaactaaaacaaGAGTAGTTTATATCAGAATTGTGTTTTGCAAAACACTGGTTTGTTTTGcacctcagggcccctgtgccgtacacctcagggcccctgcaccgtacacctcagggcccctgcaccgtacacctcagggcccctgtaccgtacacctcagggcccctgcacTGGAGCCGGTGACACACTGACGTACACGTTCATGGCCTAAAATGCGAAATGAAAATTAATCTTCATCTGAAATTTGAGAAGCGAtTGACTTCCAGAGTAAACGCACCAACGGCTCAGATCTTCTCTGGTGTCCCCGTCTGTTTCCCTGCTGACCAAACCAGTTAATTGTTGAGATGAAAGACGTGTTTGTTTAACATatGTCTCTCTTCCGTTCAGCTGGGCATGAAACAACAGTTTGAGCTGGGCCGGTTCCTCCAGAGGCGCTATGGaAACTTCCTGAGTGAGGAATACAACtACAAGGAGGTGTGTTTGTGTCTGGAGACGTACACACACACAtGtGTGTGTGTAATTAGATGTTTTCTCTGTGCTTCAGTGTCACATAATGCTGCTGCATGTGCCCAACAGCTGAAATCATGCGCCAGCCACCGTCTGTGTTATTAGCCGCTACAACACACACTCTGCTAATGAGCCTGACTCATGTTCGTGATATCACTGCCGGGGCCTTTATGGCGTGAGACATGTGGGGTCATGTGACCCCTGAGCACCATGTACACCCCCGATGGCAACAGGGGTCGTGTCTGCATGTTCAGTATTCCCTGATTTCCCTGATTTCCCCGTCTCTGTTGTCTTGACTCTCACCGTCTCCTTGCGTCCAGTCGTCTTCTCCATCTCTTAAATAATAACGCGCAATTATCACGAAAGTAGCAGCTCTTCTCAGGACCCGTCGCTTGTGATTTGTCGCGACCGCGTCTCCGTCAACTTGCTCTGTCCCCCCCCCCGCGTTGCCATGTCTGTGTTAATTTtACAAAAAAGGGGGTAAAAAAAAGAAGAAGCATTCTTGGTATCACAGGAACATCCGACCGTCTCAGTGTGATTCACTACCTGACGCGGGGCGACGGAGAGACAGAGATGTGCGAAGGCTGTTGTCAGGAGAGATCACATGTAGGATGCATCTCCCCCCCCCCCCTTTTTCTCACCCGTTTGCATCTCCTCCTCTTCATGCGGGAATACCTCCGTTGACTCGTGATACACTGCTGCTTTGCTCGGGTTCAGTTATtTTTTTGCATCTTTATTAATAAACACGTAGAGAGAAAATAAATACAGAAACGTAAGCACTCTCCGAATGCAATCCTTTTGATTTCCCAAGTGCATTTTCCCCTTTCTCCAAAATGTGAGGCACACTGTCCCGTGTTGCAGACCAGAGCGTTGGAGTCAATGGCGGCCatatggatgctttttgatatggatgctttgtgttatggatgctttCCTATGCCGTGTCTCCAACAGGTATATGTGAGGAGCACAGACTACGACCGCACTCTGATGAGTAGCCAGGCGTGCCTCGCTGGGATGTTCCCCCCAACCAGTCGCCCGCCTCCCATCATGCCCCAGTTACTGTGGAGGCCTATTCCAGTGCACACCGTCCCCAGGGCCCAGGAGAAGGTGGGCCAGCCACAGACACGTCTCCTTTCACATCGAAACGGAATAGAAACgTGTCCAACTTAACCCGAGTCCCTGAGTTGCCGCCTGCATTCACCTGAGCTGTGACCCGCCATGCTGAAATTCACTGTTTTAAAGTGGGAAATGAACATTTGATTCTGCCCAGATGACTGCAGTATACCTGCAGTAAATGTGCATTATTTCAACTTATGTTGTGCTGCTGTTTTCAATCTTTCAAGCTGTTGAGGACTCCAGGCAAAGAATGTCCAAGGTTCACAGCTCTGATGAAGGAGACCTTTGCGAGCGAGCGCTACCAGAGTTTCCTCAGGGCTCACAAGGTAAGAGAAACCACAGAAGAAGACGGTACTCCAAAAAATACACCGTAGCTCATCCTCAGTATCTGTTCTGTGACGcGAACgTTCGTCTCTCAGTTTGTGTTGAACGCCGTGATTCATGCGCCCGTTAACCACCAACAACCTGTTTGTGTGTCTGTTGCTTCTTTAATCGTCAGAATTACATCATCGCAATGTGAATAATGCTTTTCCTCGCCACACGCCGCTTCTTTTTCTGCTCATCTGTGCTTTTTAAAAATTTGTAAACGAACAAACGCTGTGAAATGCACAGCTGTAAGTGAGTGACGTGCACGGGTCACGGTTGCCGGTGCCAATGTTATCGGCGCCTCCCGCCGACGTGACGGCTCCGCTGCAGACATCGCGTCCTCTCGGTTCTGTTCTCAGGCtCGGTGACTCCAGAGCCTCGGAGGGAAAGAAAGCTGaACCGTGCAATCTCTCTCACATTCTCAGGGACGCTAATTAACGCTCGGATTGAATTAGATTAAGAATTACAATGAAAGGGTTTAATTAAACAGAGTCCCATGTGCTGCCTGTGAAGGTGGCGTGTGAGATGGAGGGCCTCCTGCGTTGCATTTTCACACCCTCTGCTGGAGGCAGTGCACCTGCAGGTGGGATGCAGTCACACAAGGTGGTCATTTTTAATCACTTGTGTTGTCTGACCAACACCACTGAATCAATAAACAATACAAATACTGTGAGCTAACCAACTAATGTCTGCACTTCTGTGGTTATCTACAGTGCATCTGCAAAAACATTACTCATATAAATGGTAATTTATGTATTTTCTTCTCTATTTTCCTTGAGAATGATGAATGAAGGTTGGGCGCTgtacttttgtgcaatttcgagatgcttatacttgacttgagttttttcatttgatggtactttacacttgtaccccacaacatttcaggtcgaaatattgtacattttagtccgttatgtttatttaacagcTGGCTACATCACAAGATCACACgTGTACAATGTAGTGTTGAAATGAGTGGGTTCAACCTTTCTGTTCACTTCATGGCGCCTTGCAAAGAAGGCATATGGTTTAAATTGAGCCCCTTGTCAGGTTTCACATGTTCCTCTCACCTTCTCACAGATTTTTGATTCCAATGACGTGATGAAGTCCATAATATTGATTTTAAACCAATCTATCATTGATCAgCTCGTAACCTGCTAGTTTGATGTTATTACCTTTTGAAAGCCCGACCAGTGGACTAAACTACCAAACTGTATACACAGTAGTTCAAACTAACTCCACCTCGGGACAACTTTAACACTAAAATGTCACATTATGTGATTTTTATTGCTCTTCTACTTGTAATGGAGTATTTGTAAATCATGGTTTGTCAACTTTAAATGAGTAAAGACTCTGATCATGTATCCCGCCCCTGGTTCTCGCCTCTTCTACACGTCGCAGCACTTCCTGGAGGCACTTTCCAACCACACCGGCTACCCCGTCTCCAAACTGGTTGGCAAAAAGATATGGGGGGTCTACGACACTCTTACCTGTCAGGTAAACttgatgtttcgcacacacacacacacacacacacacTGTGTTCTTCCGCCGAGAAATGGAGAGTGGGCCGGAGGGTGGAGAAATCTTTTTTATGCACACAGTGAGACATGAATAGGACAACATATTGAAATGATAATTAAAGCGTTGTGCGACGGGTGAAGCCGAGGCTGAATCCGCTCATTCACACTTGCAAAATGAGCATCTGTTATCTTCCGACCGGCGCTAAAAATAGAAACGGTGAAATGCAGCCATTTAAAACCCTTTGGTTGGCATCCGTGTGTTGTGTAATGCCATTATTAGCGTGACGTATGGGAGCGAATGCTATTTTCTTGTGCAGCGGATCCATAACTTGACTCTCCCACCCTGGGCCACCCAAGATGTCCAGGACATCCTGAAGAGGATTGTGTCATTTGAGGCCATGTACAGCTTCCTCAGCCACAAGCGCAAAGAGAAGGCCCGGCTCTCGGGAGGTGAGGATCCCCACTAGAGGCGATGCATTGACATCACTGCTGTGTTATCTGAATACAGGAATCCGAGTGTTGGCACAGGCTTTGTTTATGCCTCAGACGATGCTGGGCCGGGACTCCCAGAAGCACATTAGCACATATGAGCTAATGGGACAAGGATGATTACAGCACTAAGACATGATGCTCATAAGGTCAAAACAATCGTGTTGGTGGGAAAATGTATTTACACTGTTGACACTTATGTGTTAAATTACCAGGGGTGCTGCTGAATGCCATTCTGCTGAATTTCTCCAGGGCTGTAGAGCAAGGGAgctctctcaaattcattatgtactcggctgtaagttcaatttcagacacaaacacacacacacacacacacacacacacacacacacacacacacacacacatctatcgtgcaaaccgcggtttCACAAACTCCATCTTCTCCCTTCCTCTGTCTGGTTCCAGCATGACTCGACCCTCGTCACCCTCCAGGCGGCTCTGGACGTCTACAACGGCATCCTTCCTCCTTATGCTGCCTGTCAACTCTTTGAGTTCTACCAGGAGTATGATGGGTAATGACGTCCGGCCTTCCCTTTGCATATTCAACCACACTATCTAGGTCAGACGGCGGCCatatatatatatatatatCACATCCCACTTTTTAGCCGCACCGAACcccactcaccctcgccttcatcgcgcctctactggacgactgcagcagcgtcctgcagggcacatcctccagaaccatcaacacatccaaaactcagctgcatgcccgctctcccactgcaggcgggcaccagagaccacatcttccctccactggttccccatacagcagagaatacagttcaggattctcaaaagagcccttcacaaactagccccccccccctccataactcaccaactgcattcaaaactctactttttaaaatctgctttcaacatgtgatgctgattctttatttatttatatatatatatatttggtattttcttaatgtcatctctctgcctcgtttgtattgttattgctttcattgtttctgttctcaAAgtgtgtgtgtgtgtgtgtCATCTCATTGTGTTCATCCCCCAGTTCCTATTCTCTGGAGCTGCATTACCGTAATGAGTCCTGGCGCGACCCGTACCCTAACCCCGTGGCGGGCTGCAGTGGGATGACCCCcTGCCCTCTGGCCATGTTCACTGAGCTGGTGCGGGACGTGGTGGCCGACAACAGGGAGGCCGAGTGCGGGTTCAGGACCAGGTTGTCAAGCACAAGTGAGTTAAAAACAATATTCCCATGACTTCTATTCCAACTAATACGTTTTGGCCTGGTTAAATGCTGCAATATGTTTATTCCTGCATTTACTTTGGGCCCCAGTgGGGGGGGGGGGGGATTTCCAGCAGAGAATGTCTGATTTaaaaatatcttggctttttggaaatcttccacatacacgcacacacacacacacacacacacacacacacactcacacacctaaacagggttgtgtcTCCCACAGGTGTCATCACAGCTCTTGCAGTGACTGTCGGTCTCCTGGCGGTGGCGCTGTTGTTCAGCATTCTCGTGACAATCAAAAGGAGGCGAGCCCACTACTCCAGGGAGGTGAACAAGATGTGGAAGTTCCAGGAAAGTTTGGGCTGTTTGTTGCTCCTCTGCTGCGTCTGCTTCAACGAGTGCCGGGTCCTGAAGTTTGTTGTGGCTGTGTTCCGACATGGCGATCGATCGGCCGTTGAATCGTATCCCAGaGATCCTCATGGGGAGAAAGTGTGGGCTCAAGGCTTCGGACAGCTGACTGAGCTGGGCATGAAACAACAGTTTGAGCTGGGCCGGTTCCTCCAGAGGCGCTATGGaAACTTCCTGAGTGAGGAATACAACtACAAGGAGGTATATGTGAGGAGCACAGACTACGACCGCACTCTGATGAGTAGCCAGGCGTGCCTCGCTGGGATGTTCCCCCCAACCAGTCGCCCGCCTCCCATCATGCCCCAGTTACTGTGGAGGCCTATTCCAGTGCACACCGTCCCCAGGGCCCAGGAGAAGCTGTTGAGGACTCCAGGCAAAGAATGTCCAAGGTTCACAGCTCTGATGAAGGAGACCTTTGCGAGCGAGCGCTACCAGAGTTTCCTCAGGGCTCACAAGCACTTCCTGGAGGCACTTTCCAACCACACCGGCTACCCCGTCTCCAAACTGGTTGGCAAAAAGATATGGGGGGTCTACGACACTCTTACCTGTCAGCGGATCCATAACTTGACTCTCCCACCCTGGGCCACCCAAGATGTCCAGGACATCCTGAAGAGGATTGTGTCATTTGAGGCCATGTACAGCTTCCTCAGCCACAAGCGCAAAGAGAAGGCCCGGCTCTCGGGAGGGGTGCTGCTGAATGCCATTCTGCTGAATTTCTCCAGGGCTGTAGAGCAAGGGAgctctctcaaattcattatgtactcggctCATGACTCGACCCTCGTCACCCTCCAGGCGGCTCTGGACGTCTACAACGGCATCCTTCCTCCTTATGCTGCCTGTCAACTCTTTGAGTTCTACCAGGAGTATGATGGTTCCTATTCTCTGGAGCTGCATTACCGTAATGAGTCCTGGCGCGACCCGTACCCTAACCCCGTGGCGGGCTGCAGTGGGATGACCCCcTGCCCTCTGGCCATGTTCACTGAGCTGGTGCGGGACGTGGTGGCCGACAACAGGGAGGCCGAGTGCGGGTTCAGGACCAGGTTGTCAAGCACAAGTGTCATCACAGCTCTTGCAGTGACTGTCGGTCTCCTGGCGGTGGCGCTGTTGTTCAGCATTCTCGTGACAATCAAAAGGAGGCGAGCCCACTACTCCAGGGAGGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00328	His_Phos_2	Histidine phosphatase superfamily (branch 2)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000560	Family	Histidine phosphatase superfamily, clade-2	Interproscan
IPR029033	Homologous_superfamily	Histidine phosphatase superfamily	Interproscan
IPR033379	Active_site	Histidine acid phosphatase active site	Interproscan
IPR050645	Family	Histidine Acid Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11567	ACID PHOSPHATASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003993	Molecular Function	acid phosphatase activity	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005764	Cellular Component	lysosome	Interproscan
GO:0007040	Biological Process	lysosome organization	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0016791	Molecular Function	phosphatase activity	Interproscan
GO:0030971	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0045211	Cellular Component	postsynaptic membrane	Interproscan
GO:0048168	Biological Process	regulation of neuronal synaptic plasticity	Interproscan
GO:0120154	Biological Process	negative regulation of ERBB4 signaling pathway	Interproscan
GO:1990264	Biological Process	peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-