Detailed information of HS10950 in Pseudoliparis swirei Gene info
Gene IDAnnotationChromosomeStartEndStrand
HS10950LAFORINchr121010292410127212+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00305LipoxygenaseLipoxygenaseDomainInterproscan
PF00686CBM_20Starch binding domainFamilyInterproscan
PF00782DSPcDual specificity phosphatase, catalytic domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000340DomainDual specificity phosphatase, catalytic domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR001885FamilyLipoxygenase, mammalianInterproscan
IPR002044DomainCarbohydrate binding module family 20Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013784Homologous_superfamilyCarbohydrate-binding-like foldInterproscan
IPR013819DomainLipoxygenase, C-terminalInterproscan
IPR020422DomainDual specificity protein phosphatase domainInterproscan
IPR020834Conserved_siteLipoxygenase, conserved siteInterproscan
IPR029021Homologous_superfamilyProtein-tyrosine phosphatase-likeInterproscan
IPR034831DomainLaforin, CBM20 domainInterproscan
IPR036226Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR042942FamilyLaforinInterproscan
IPR045204DomainLaforin-like, dual specificity phosphatase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46864LAFORINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004725Molecular Functionprotein tyrosine phosphatase activityInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0016311Biological ProcessdephosphorylationInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0019203Molecular Functioncarbohydrate phosphatase activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:2001070Molecular Functionstarch bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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