Gene detail

Detailed information of HS10371 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS10371	TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE	chr11	20449946	20454522	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS10371

CAAAACAGCCGACAGCAGGAGGACGAGACTGTTGAGGAATACGACAAAGACGCCCCACAAATGAAGCCAAATATAGGTACCTATTTAATACTATGCACTGATCTATCTTATTTCAAATAGAGGTTACACACATATTTGTGGTAATTGTCTTCCGTATCGCGACATCGGTCTGACTGATAAGTTGTACAGCTAACGTTAGCGTTAGCTACTAGCAGCAACAAATGTCTCTTCAAGCAACATTCATATTCATGGATGACTCTAATTCATATGTTGTCTTTATCTGAGTCTTAATACCTCGGTAGTGGAGAGAAATGTATCTGCTATCCGGACTATAGCGTGTTTAATTCATAGTTTATAGGTCGGTGTGTAGCCTAGCTGCTCGCTGACGTGGTCGCGTATTTAAAAGACCATACACATagttagcatgttttagcatgttttagcatgttctcgcatgttttagcCCCCGTACAAACTAAAATCGCAGTGTGCAGTTCAGGGTAACAGCTAGCATACAATGAAATTAAGACTTGCACGATGTAACAAAAGTCCTCAAACtgttgagatatgtactcagatgtatatgtaatgtaatgctgtactctggtatgtatatatggttacaccacagggtggcgctagggctcaggctataaaggccaatgtgccatatgttaaattgttcagttgaagtagctctgaccgtgagactgatgtgtcagaagcgtgctaaataaatacgccgacaacggctaaagataaatccatcatttattctttcctccgaatgcaacggtagctgctgcaacagtgctccacaaCTCAACACAAACAAATGCTACTATTTTCAGTCGTGATCCAAAAAAAAAATGTCATCGCCTCAAGCAGAGGAGCAGAGACTCTGAACTTGATTGACAAGAATCCCTCACAGAAAATATGTCGCCCGTTCCTCCTGTCTCAACAGTCAGCTGGCCGGGAGCCATTAGGACAAGTGAGTTTGACTCTTCATCGGAAGAGGAGGAGGTTGGAGAGGAGCAGCTGACCCCTTTTCAAGTTTCCTGGTACTTTTTTAGCAGTTTTCCCTTTGCTAAAAAgtgtgtgcatcagtttgcttgtaaatggtgacatgtaaataaatatatttatatatatattattatttatatatatattatattacatttacatatatatatttatatatatatttataaatatatttacatatatatatatattattatatatttacatatttctatatttatttatatatatataatatatatatatattatttatatataataatatatatatatatttgttctaatgatTGTCTTTTAGGTTACCTCTGTCCATGGTGGAGTGCTCGCAATTTCTTGGGATATGTGCACTACCAGGTAAAACTCTAGTTTATCATATTTTTTTCTATTTCTACATGTTGCTGTTTTTACTTTATTGAAAGATTGTTGTGCAACTGAAAATAAAACAATGTTTTCCTCATTTGACTTCAGGTTGCAAATACAAGGACATCCGCAGGAGTCTGGAAAGGGATGTTGGTAAGACAACGTGTACAATGCTCAGGATAAAACCATTTTAACATTTGCAGTTAGATCTTTTATTATATCTTTATTTTGAAATGCATTGGATTTGGGAACATGTTGTGTGTGTGTGTGAGCAGGACATTTAAGAAGATGACACACTGTCACTGAAGGGTGCCACTAATAACTGTTTTTATTGACAATTAATTTGAGTTAAAAAGTCTTATTTGTCACAATCAGTTTCTTTAAGGCAAATGAAGCtcttacaaatcgcttgttttgtctaaaagtcaaaacaaattaataatttggtgtcacataaaatgaagatagtcagaaaatattcacatttaagaagcaagaactggaattttgttGTATTTTTTGCTTGAAAATGTGCTACAACCATTAATAAATAAACCAAAAAAGCAGTTTTTAAGTGTGCGTGTTGAGCAAATGTCTGATATAATGTTCCAGACATCACGTTCGCTCTCAGATTTTAGGAGTGAAAATGAACTTCAATGATATTTCAGTTGGATTATCAAGCTTCTAAGTCTCGAGGCCAAAGTAGCCCTTCAACTCATTGTGTTTATGAAGATGCATATGGGAGTGTGCAGAGAGTGAGCCCTCTGCTCTACTGGGAATATGTTCTCAGCCCTTTACATGTTAAAACTATTTTATTTTTAACGAGCCTCGTTGGAGGAAAAAGGCGATAACTTGAAGAACCTGTTTTTCCTGCCGGTAAACAGATGAGCTCCAAAACCAAGGGGTGCAGGACGTGTTTGTTTTCTGCACCAGAGGAGAGCTCAACAAGTACCGGGTGCCCTCCCTGCTGGAGGTCTACCGGCAGCGGGGCTTCACGGTGCACCACACGCCGTTCCCCGACGGAGACGCTCCGGAGCTGCCGCAGTGCTGCCAGATCCTCGAGGAGCTGCAGGTCGGCCTCGAGAACAACAGGAGGTCTGTGATCCAGTGAGTCCCCGCTTGAGATTCAGACTTTCATAAAAATGTCTCTCAAAAGCAACAAAACATTCACAAAAAAATACTTTGTAATCACATAGCAGATTTTACATTTCCCAAtttatcttcctttttcttctgtgtgtatgtatgtatatttgtgaatatatatgtgtatttatatatgtatgtatatttatatgtatgtatatttgtgtatatatatatttgtgtatatgtatgtgtatatatatgtatatatatacgtatatatatatatacaccatagcacctcaattaaactattgaacagaagttacttctgtttgtatttTAAGTTCAAACGATGGGGGTTTCCTGGGGGATAAGAGCATTCATAAACCATAAACAAGCTGAACTCAGCTGATCTACATGAACAAGAGGAGTCATGAAGTAGAAAGTAATGAAAAAGAGAGATTACGTGACAAACTGGTCCTCCTTGTTCTTATTGGACAACAAGAAATGTTGTTTTCTTTTTACGAGGTTTTAAGTAGCATTTAGAAATGTTGTGATATAACAACATAACGTTCTGATTTTACAATAATGTTCCTGTACAAATGTAATAATTTGATATCAATCTATGTGCTCCATCAAGATCTTTTCACAGATTTAATGAGAAAATGgtcaaatgttttttgtgtggcaacaactacagccagaggaaagctgccggttcatgtgtgactttgtaaaACCTGCTGAGGGCCCCGAGAGGCTCCCGGGTCCCCGAGCTGATGGAGCTGCTCCTCAGGCAACCGACTGGGTACTGGGCCGTTGCTACCCAAGCATGCCCACGTAGAAACCGTGTCAGGGGAGGTTCTAGAGACGTCCTGCAACAGTTCTACCCTTTGTGTTTTGTCCTATTTAACGTATTTTTAATGAAACAACCCTGTAGCACGACTCGCCACAAAGACTTCTGTCAAAGTCTCTTTACACAACTGAGTGATTTGCTTCTTTTTTTCCTCCTTCAGCTGCTATGGAGGCCTGGGGCGcTCCGGATTAAGTACGAATATTTGACTTATCCTTTGTTTGAAAGTTTGTCTTGTGTCATTTTTCATAACCCAGATCAGTGTTTTGTTTTGTAAAGCCTGATGTGTCATGCTCCTCAGTCGCTGCCTGCCTGCTGCTCCTGCTCTCTCTCACGATGACGGCAAACAAAGCCATCGAAATCCTGCGGGAGCACCGCGGAGGAGGAGCCATCCAGACCGTGAAGGTGAGCGCTTCAAAACATGTCGAGGAATAGCATTAATGCAgATGGCATATCATACGGGTTGTTGATTTCATAACCTTTTATTCACTCACTGAAAACTTGCTCAAGTCAAGATATATATATAAAAAAATTATGAAGTTATAAGCGGGGACTATTTTAAATTCTTCCATTTAATTTAGTTTGTCAGTATATTCTTGATCTTAATGCTATAAGTGACCTCCAAATAGTCTCTTGATAACCAGCCAGTTGGTTTTCTTGAATTTGTTCTTCCTCCTCATATTATTTATGTCCAAGTGTCTAATTTTTTTCAGTAATTATGAAAACAAGTTTGAAAAATACCGTAATTGATTTCCCTGTGACAAGCTCCGACATGAGATTAGAGAGATTAAGTATTGTGAGAAAAGTGACATTTAAGACTAACTGAATAATACTATTGCATTCCAGATGAATCTTTATCTGCTAGAAGCTACCAAATCCTACACATTAAGTTGTCCTGTTAAAAACCTTACTTTGTTTGTTGCATAACAAATACAAGCGTATTGAATCTAGTATTGATGAGACTGATGAGGTCTGGGTCCCGATTGAAAAGGACCCAGACGGCTTGAACATTAATGCAATCATAAAAATACAAGTGACAATATTCCACCCAGTGTGATGTCAAGCAAGCTAGTTTCAACTGTTTAGAAATGTAATTAAAATGTAAAACTAACAGCGTAATTCAACTTTTTTCCCCGCAGCAATACAACTTCCTCCACGAGTTTCGGGAAAAGTACGCGACGTACCTTGAGAGCCGAGAGGCTTCCATCGAGCGCTCGGTGTCCCGGCAAAACAGCCGACAGCAGGAGGACGAGACTGTTGAGGAATACGACAAAGACGCCCCACAAATGAAGCCAAATATAGTCAGCTGGCCGGGAGCCATTAGGACAAGTGAGTTTGACTCTTCATCGGAAGAGGAGGAGGTTGGAGAGGAGCAGCTGACCCCTTTTCAAGTTTCCTGGTTACCTCTGTCCATGGTGGAGTGCTCGCAATTTCTTGGGATATGTGCACTACCAGGTTGCAAATACAAGGACATCCGCAGGAGTCTGGAAAGGGATGTTGATGAGCTCCAAAACCAAGGGGTGCAGGACGTGTTTGTTTTCTGCACCAGAGGAGAGCTCAACAAGTACCGGGTGCCCTCCCTGCTGGAGGTCTACCGGCAGCGGGGCTTCACGGTGCACCACACGCCGTTCCCCGACGGAGACGCTCCGGAGCTGCCGCAGTGCTGCCAGATCCTCGAGGAGCTGCAGGTCGGCCTCGAGAACAACAGGAGGTCTGTGATCCACTGCTATGGAGGCCTGGGGCGcTCCGGATTAATCGCTGCCTGCCTGCTGCTCCTGCTCTCTCTCACGATGACGGCAAACAAAGCCATCGAAATCCTGCGGGAGCACCGCGGAGGAGGAGCCATCCAGACCGTGAAGCAATACAACTTCCTCCACGAGTTTCGGGAAAAGTACGCGACGTACCTTGAGAGCCGAGAGGCTTCCATCGAGCGCTCGGTGTCCCGG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05706	CDKN3	Cyclin-dependent kinase inhibitor 3 (CDKN3)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR008425	Family	Cyclin-dependent kinase inhibitor 3	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR020422	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR022778	Domain	CDKN3 domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR050561	Family	Protein Tyrosine Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23339	TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-