Gene detail

Detailed information of HS08787 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS08787	PRO-THYROTROPIN-RELEASING HORMONE	chr9	25506701	25508312	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS08787

CGTCTCCAGAGTCTTGAGGAAGAGGAGAGCTTCCACTTCCAGGTGAGGACCAACGTGAAGATGTCTGTCGTCTGTGGAGCTGTGTTATATGTTATTTATCAGATGGCTCTTTTTGTGTTATTATAATTCATTTCGGAAGTTTTTAAGACAACTTAGTGTTCAATTTACATATTTTCTTTCTGTGAAGCTGGTTTAAAATGTTGCTACGGTGAAAATCGTGTGCTTTTTTATACTTTTTTTTATAAGAAATAAGTGGTCAGAATTAAATGTGAAAGACGTCAAGTTGAACCAAGTTGATCTAAACAAACTATTCATCTCTTATCTGATATATATCGTCTCTGTTTCTTCATCAGAGGACCAACTCAATGACCATGAAGTCCACTTGTCTGCTCATCTGGGCTTTCCTCGCGCTCTGCAACTTCACTGCGTCTGGAGGACAGGGCGTCCCCGCCGAGGCTGAGACGGACGGGAGGACCATCGACAACATCATCCTCCAGAGAGCAGAAAGTCTCCTGCTGCGTTCCATTCTCAAGAAGATACAGGACGAAGACGGCAGAAACGGTGCGTAAAAATACGCGCCGTTTGGATCAGTTGCGCGGGAAACGGGTGATTTGATGCAACAATGGTGACAGGAGTTGACTTTAAAAAAAAGAAGTTTTCAGTCATTAAATTAAAATCCCCGCCGCCAGAAAATCGATAACAGTGATATTTTACCTTGATTTTTAAGTTGAAAGTATTTTAAAGTGAAACGTGTTATAGTGATGTTCTTAAGGCGTACACGTGGGTTCCAGATAGATAATTATTTTAAAAAACATACAACACATTATCTCTAAAACAAGATAAATGGAAAAGAATCTTCCTCCCATTTTAATATGACAACTAGTCTGTGCGCAATTTACGCACAAGGGACACGGGGATATAAGTCTATGGGTCTCCTGGAGATAATCTGAACATTATTTATTTCCTTTCTCCAGAGGGATCCTCCTCTCAGGCAGAATGGGTGACAAAACGACAGCATCCCGGTAAGAGATACGGCGAGGACTTGGAGAAGCGGCAGCATCCggggaggagaggagaaggaggagaagagggggaCCAGTACTCGGACGTTCAGAAGAGGCAGCACCCGGGCAAACGCGAGGTAGAAGAAATGCACTCGTTCACGGAGCTGCAGAAGAGGCAGCATCCGGGGAAGCGCTTCGCAGTGGCGGGACGCGTTTCCGAAAGCCCCGCGACGCTCCTGGGGGGGGGGCTTGCAAAGCGCCAGCACCCGGGGAAGCGCTACCTGGTGGTGCACAGCAAGCGCCAGCACCCAGGTAAacgcgacggggacgacgacggggacgactgggatgtggacggagagggagacgacgacgacgacgacctcgccgacTTGGAAAAGCGGCAGCACCCCGGGAAACGGTTTTGGGAGAACTCCAGTCCGGATTTGGGCACAAACAGTCCGTGTGACGCGTCGGACCCTACGAGCTGCAGCAAGACCAGTTTGCTGCTCGACTTTTTAGATGACATTCACAAGAGCCACGCCGAGGAGAAGCGACAGCACCCGGGTAAACGGTTTGCACCCGAGGAGGACTCAGTGGAAGGAGAGCGTCTCCAGAGTCTTGAGGAAGAGGAGAGCTTCCACTTCCAGAGGACCAACTCAATGACCATGAAGTCCACTTGTCTGCTCATCTGGGCTTTCCTCGCGCTCTGCAACTTCACTGCGTCTGGAGGACAGGGCGTCCCCGCCGAGGCTGAGACGGACGGGAGGACCATCGACAACATCATCCTCCAGAGAGCAGAAAGTCTCCTGCTGCGTTCCATTCTCAAGAAGATACAGGACGAAGACGGCAGAAACGAGGGATCCTCCTCTCAGGCAGAATGGGTGACAAAACGACAGCATCCCGGTAAGAGATACGGCGAGGACTTGGAGAAGCGGCAGCATCCggggaggagaggagaaggaggagaagagggggaCCAGTACTCGGACGTTCAGAAGAGGCAGCACCCGGGCAAACGCGAGGTAGAAGAAATGCACTCGTTCACGGAGCTGCAGAAGAGGCAGCATCCGGGGAAGCGCTTCGCAGTGGCGGGACGCGTTTCCGAAAGCCCCGCGACGCTCCTGGGGGGGGGGCTTGCAAAGCGCCAGCACCCGGGGAAGCGCTACCTGGTGGTGCACAGCAAGCGCCAGCACCCAGGTAAacgcgacggggacgacgacggggacgactgggatgtggacggagagggagacgacgacgacgacgacctcgccgacTTGGAAAAGCGGCAGCACCCCGGGAAACGGTTTTGGGAGAACTCCAGTCCGGATTTGGGCACAAACAGTCCGTGTGACGCGTCGGACCCTACGAGCTGCAGCAAGACCAGTTTGCTGCTCGACTTTTTAGATGACATTCACAAGAGCCACGCCGAGGAGAAGCGACAGCACCCGGGTAAACGGTTTGCACCCGAGGAGGACTCAGTGGAAGGAGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05438	TRH	Thyrotropin-releasing hormone (TRH)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008857	Family	Thyrotropin-releasing hormone	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17530	PRO-THYROTROPIN-RELEASING HORMONE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001692	Biological Process	histamine metabolic process	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008437	Molecular Function	thyrotropin-releasing hormone activity	Interproscan
GO:0009755	Biological Process	hormone-mediated signaling pathway	Interproscan
GO:0014050	Biological Process	negative regulation of glutamate secretion	Interproscan
GO:0014054	Biological Process	positive regulation of gamma-aminobutyric acid secretion	Interproscan
GO:0030141	Cellular Component	secretory granule	Interproscan
GO:0032024	Biological Process	positive regulation of insulin secretion	Interproscan
GO:0042755	Biological Process	eating behavior	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-