Gene detail

Detailed information of HS07849 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS07849	ATRIAL NATRIURETIC FACTOR PRECURSOR	chr9	876653	878595	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS07849

AAGGATACCATGAGGACCGTGGTCCTGCTGGCCCTGCTGAGCCAACTCGCCCTGATCCACAGCCACGTCCTGGGAAGAGGCTCCTCCCCCGGGGAGCTGGCCCAGATCAAGGTAGGACACCCCCTCACCTGAGGTCACCTCACCTGTGTGTGTGAAGACGGCTTTAAAGACAGGGCGTGTGTTCAGGGTCCTGCGGGGGGCGCTGTTGAGTCCAGGAACTCTCTGTACGCTATGTGAGAAGCTCTTCAGGAAGTTAACACTGTTTTCTTAACTACGCAGTAATTTGGGGTTTTCTTAGTTCAGGTGTTCTGCTCcactgaggtcactgaggtcactgaggtcacGACCTCTCTCACAGTACCAGATTAATAACCTCAACATTTAAAAAGTGTTTACACACATTTTACATCCAGtatttattattcaatactttttatttatttattGAAAGACAAAAGTCAGAAACAAATTAAAAGTATTTAATTAAAAATATTGTATCTAAAATGTCGATAAACACTTGAGAAATGTTGACAGAGATTTTATGTCCAATATTATTTGTTTAATATATTTTTTAAATGTTTACATTGCAAGACACaaGTCAGAAGTAGGAGGTCAGAGTTTAGTGAGGGAAGGAGATAAGGAGGTGTTGATGTGTGTGTGTGtGGGTTTAGAGGAGGGGGGGGGCAGAATACATTTCATACCCAAGTTATGATAACATTAATAACAGTTACCATACGGTGCTTCATAAAGTCAGAGAGAGAGCGGGCAGCACTTTGGTaatattataaataaaataaaataaaTATTCTGCCGTCCAATGAAATGAAATCAActgaacgtcacacaacaaccggctaacggtgaagcacctgaacgtcacacaacaaccgactaacggtgaagcacctgaacgtcacacaacaaccggctaacggtgaagcacctgaacgtcacacaacaaccggctaacggtgaagctcctgaacgtcacacaacaaccggctaacggtgTGCTGGAGCCGACCATGTGTACAAAGCACCGGTCCGGGGGCTCAGGGGCGCCCGCTGCTCCTCGGGTCGGTCCACTTCCAGCTCTGACTCGAGTCGGGGGGGGAGCTCCTTGAGTAAAATATAAAAACATTTTATTCGAACCATTCCTTTCTTCACCACCATCAACAGGACCAAGAGCCGAGTTCCCTAGAGGCTCGGGAGTGTTCCCTGGTCATGACATCACGATATgaactgtacgaactatacgaactatacgaactatacgaactttacgaactatacgaactatatgaactatacaaactatatgaactatacgaactatatgaactacacgaactatatgaactatatgaactatacgaactatatgaactacacgaactatatgaactatacgaactatacgaactatatgaactatacgaactatacgaattttacgaactatacgaactatatgaactatacgaacgatatgaactatacgaactatacgaatattacgaactatacgaactatatgaactatacgaactatatgaacgatatgaactatatgaactatCTTAGCTACATTCACTATCCCATAACTGTATTCTGTGTCTCCTCACCAGGCTCTACTGGAGCGCTTGGAGGACTCTCTGGCCCAGGCGGCCCAGGAAGAGGCCTCTGAAGCCGACTACGAAGGGACCAACCGGGACCCTGAGGACAGCCCGGCCGGCAGGGGATGGACCCTGGACCCGGAGGGGAACCGAGAGCCCTCCGGACCAGAACCGCCTCCAGGACTCGGCGGCAGGACTCTGAGCCAGAGGAGCCGCCTGCAGGACCTGCTGCTGACAGCCAGGAGGCAGACCTCCTCCGGCTGCTTCGGGGCCCGCATGGACCGCATCGGGAACGCCAGCGGCCTGGGCTGCAACACCGGGAGAGGTAAGGATACCATGAGGACCGTGGTCCTGCTGGCCCTGCTGAGCCAACTCGCCCTGATCCACAGCCACGTCCTGGGAAGAGGCTCCTCCCCCGGGGAGCTGGCCCAGATCAAGGCTCTACTGGAGCGCTTGGAGGACTCTCTGGCCCAGGCGGCCCAGGAAGAGGCCTCTGAAGCCGACTACGAAGGGACCAACCGGGACCCTGAGGACAGCCCGGCCGGCAGGGGATGGACCCTGGACCCGGAGGGGAACCGAGAGCCCTCCGGACCAGAACCGCCTCCAGGACTCGGCGGCAGGACTCTGAGCCAGAGGAGCCGCCTGCAGGACCTGCTGCTGACAGCCAGGAGGCAGACCTCCTCCGGCTGCTTCGGGGCCCGCATGGACCGCATCGGGAACGCCAGCGGCCTGGGCTGCAACACCGGGAGAGGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00212	ANP	Atrial natriuretic peptide	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000663	Family	Natriuretic peptide	Interproscan
IPR002407	Family	Natriuretic peptide, atrial type	Interproscan
IPR030480	Conserved_site	Natriuretic peptide, conserved site	Interproscan
IPR050787	Family	Natriuretic Peptide Hormone	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14066	ATRIAL NATRIURETIC FACTOR PRECURSOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003085	Biological Process	negative regulation of systemic arterial blood pressure	Interproscan
GO:0005179	Molecular Function	hormone activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006182	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan
GO:0007218	Biological Process	neuropeptide signaling pathway	Interproscan
GO:0019934	Biological Process	cGMP-mediated signaling	Interproscan
GO:0051427	Molecular Function	hormone receptor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-