Gene detail

Detailed information of HS07018 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS07018	UNCHARACTERIZED	chr8	4991598	4992758	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS07018

GCGAACGCGAGTTCGTGCCGTAGACGTCATCTTCACGAGACGCGTTTTTTTTCCCGTCGCAAAGTAAGAAAGCAGCTAACGGTAGCTAGCAAGGCGGCGTCGTTTTTGTTTTCGAGAATGGCGTCCTCAAAGAAGGGGAAGAAAGTTATAAATCAAGAGGAaCTCCGGCGtTTGATGAGGCAGAAACAAAGACAGACGACGGACAAGAAGCGCGTCGAGTCTCCGTTCGCCAAATACAACAGTCTCGAGCACCTCAGTTGCGTCCTGTGCAATGTGCAAGTGAAGTCCGAACTGCTGTGGCCGGCGCATGTACTCGGAAAACAGCATAAAGAGAAAGTCGCCGAGCTGAAGGGAGGAAAGAGTCAAGCGGTGATGGGACCACCGATGCAACCGGTGAAGAGGAAGGCaCCGGACAACCGGGCCGGGAGCGGGAAGAAGGTTAAACCCGCCGCGGCTGCGGGTCCGTCCTCGTCGTCGGGGCTGCCGGAAGATTTCTTTGCGAAACCGAGCAACAAGGGAACCGTTTCCACCGAcACACCTGCTGGTCGGAGTCTGCTAGCTGGGGTTTACGAGGATGAGGAGGGTGATGAAGGACGTGCCGAAGAGGCGCGTCCGGCGGGGACCGCGGATCCCGCTCCGAAAGACACCGACGCCGCGGGGCTACCGGAGGACTTCTTCGACAGCGCCCTCCCGTCCGCGCCCGCCATCCGCCACTCGGGCTCCATCGCGAAGGCGGACGTGCcGGAGAAGAGCCCCGAGAAGAAGGAGAACACCGCCGAGGCGCTGCCGGAGGGCTTCTTCGACGACCCGGTGCGGGACGCCAAGGTGCGCAAAGTCGACGCGCCCAAAGACCACATGGACAAGGAGTGGGACGAGTTCCAGAAGGCGATCCGACAGGTCAACACGAAGTCGGAGGCCATCGTGGCGGAGGACGACGAGGAGGGGCGCCTCGAGCGGCAGATCGACGAGATCGACGAGCAGATCGAGTGCTACAGGCGCGTGGAGGTGCTGAGAGACAAGCGGGACGTGGCCAGGAGCAACGCGCTGCCCgaggaggaggaggaggaggaggaggtggacggcagcgacgaggaagaggaggacgaagaggagCTGCTGGGGCTTCTGTTCCGGGACTGGAGGGCGAAAGGGGCTCTGGCTGCGAACGCGAGTTCGTGCCGTAGACGTCATCTTCACGAGACGCGTTTTTTTTCCCGTCGCAAAGTAAGAAAGCAGCTAACGGTAGCTAGCAAGGCGGCGTCGTTTTTGTTTTCGAGAATGGCGTCCTCAAAGAAGGGGAAGAAAGTTATAAATCAAGAGGAaCTCCGGCGtTTGATGAGGCAGAAACAAAGACAGACGACGGACAAGAAGCGCGTCGAGTCTCCGTTCGCCAAATACAACAGTCTCGAGCACCTCAGTTGCGTCCTGTGCAATGTGCAAGTGAAGTCCGAACTGCTGTGGCCGGCGCATGTACTCGGAAAACAGCATAAAGAGAAAGTCGCCGAGCTGAAGGGAGGAAAGAGTCAAGCGGTGATGGGACCACCGATGCAACCGGTGAAGAGGAAGGCaCCGGACAACCGGGCCGGGAGCGGGAAGAAGGTTAAACCCGCCGCGGCTGCGGGTCCGTCCTCGTCGTCGGGGCTGCCGGAAGATTTCTTTGCGAAACCGAGCAACAAGGGAACCGTTTCCACCGAcACACCTGCTGGTCGGAGTCTGCTAGCTGGGGTTTACGAGGATGAGGAGGGTGATGAAGGACGTGCCGAAGAGGCGCGTCCGGCGGGGACCGCGGATCCCGCTCCGAAAGACACCGACGCCGCGGGGCTACCGGAGGACTTCTTCGACAGCGCCCTCCCGTCCGCGCCCGCCATCCGCCACTCGGGCTCCATCGCGAAGGCGGACGTGCcGGAGAAGAGCCCCGAGAAGAAGGAGAACACCGCCGAGGCGCTGCCGGAGGGCTTCTTCGACGACCCGGTGCGGGACGCCAAGGTGCGCAAAGTCGACGCGCCCAAAGACCACATGGACAAGGAGTGGGACGAGTTCCAGAAGGCGATCCGACAGGTCAACACGAAGTCGGAGGCCATCGTGGCGGAGGACGACGAGGAGGGGCGCCTCGAGCGGCAGATCGACGAGATCGACGAGCAGATCGAGTGCTACAGGCGCGTGGAGGTGCTGAGAGACAAGCGGGACGTGGCCAGGAGCAACGCGCTGCCCgaggaggaggaggaggaggaggaggtggacggcagcgacgaggaagaggaggacgaagaggagCTGCTGGGGCTTCTGTTCCGGGACTGGAGGGCGAAAGGGGCTCTGGCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12171	zf-C2H2_jaz	Zinc-finger double-stranded RNA-binding	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR022755	Domain	Zinc finger, double-stranded RNA binding	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR040050	Family	Zinc finger protein 830-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13278	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005681	Cellular Component	spliceosomal complex	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0033260	Biological Process	nuclear DNA replication	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan
GO:0044773	Biological Process	mitotic DNA damage checkpoint signaling	Interproscan
GO:0048478	Biological Process	obsolete replication fork protection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-