Gene detail

Detailed information of HS04525 in Pseudoliparis swirei Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
HS04525	SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT	chr5	27880852	27887594	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HS04525

ATGTCGGCCAACAAGGCGAGCGACGGCGGCTGGAAGACGTTCGTGTGGAACTCGGAGAAGAAAGAGTTCCTGGGGCGAACCGGCAGCAGTTGGTGTGAGTGAAGTCTTCTTGTTCATGGCGGGTAGAAAGTGGAGGAAAGAAGATGGAGGAGCTCGCGGAACACCTGTTAACGTCGTGACTGCGCCGGGCAGGCCGAACCCGGTAAAACCGTTAAAACCGTTAAACCGAAGACACGTAGCGCGTTCTGCCTTTTATTCCTCGTCGAGTCACGTGTTGCTCGTGTTTAACGCACTTTGAGTGTTTTAGTCAAACTggccgggggccggggaccgggggccgggggccggggaccggggaccggggaccggggaccaggggccggCTCCCCGCGAGAGGACGCGTCCCGAAGGCGTCGCCCGGCTGGAGGCGGCAGCGCGTCCTTCGATGAAAAGGTCACGCTGAAGGACGGACCGGGCAGGGCCGCGCTCACCGGGCCACACCGGGGAAAGTTGCGTCTCTCCCGGGTCCTCGTCTCGGTGGCAGCAGCCTCCGCGGAGAGACAACCGGGGGACATGACCCCCCcTCGGCCCCAGAGTAACGAGCCCCTTGGGCTTTCATGTTTAAAGCccggattaccggacccggatcctgagacccgggtccggTACTTAAAGGGTTTTTAAGTGGATCACGCGCTCAGCCTGTTATACAGTCCTGGTGTAAgCTCTCTAACCCGTCTTTAGGATTACACCTCTGCCCGGTTACCGGGCCCGGTAACACGGTGCCGAGCTGATCACGACTCTCATGTCTCCAGAGGCCCCAGCTCCTCCCCTCCCCCTCCCCGAGGGAATCGGCACGATGTCCGGCTACTGTTCGTCAGTCGGTCCGCTGTGACGGACATTAATGTGTTATTACTAATCAATCCGGTCATAAAGGACCGGCTCCGTTATGTGACCGGCACGTCGCGGCGGCTCACGGGTCTCCATGGCAACACGGATTAAGCTTCATAGCGACTTTGCAGAAGCTGAGAAAAATATTTGATAAGTGAGTAAGAGGTGGGGGGGGGGGGgCTAAGCAACAGGTCGAACGAGAAGTGTGTCTTTTGTTTTTAATGAggggctccagtgtggacagacaggcagacagagagacagacagagagacagagagacagacagagacagacagagagagacagagagagagacagacagacagagagacagacagacagacagagagacagagagagagagacagacagagacagacagagagacagacagagagagacagacagagagacagacagagagacagacagacagacagacagagagacagagagacagagagagagagagagagagacagagagagacagacagagagagacagacagagagagagacagagagagagacagacagacagagagacagagagagagagacagacagagagacagagagagagacagacagacagacagagagagagagagagacagagagacagacagagagacagagagagagactttagacaggtgacttcaGGACTGCAGCAGAGCTTCAGGCTCTGCTGGgggggggtctaggtgggtgtctaggtgggtctggggggtctaggggatctagtgggggtgtctaggtgggtctggggggtgtctaggggatctgggggggtctaggtgggtgtctaggtgggtctggggggggggtgtctaggggatctgggggggtctagCTTCATCACCTGGTCCACAAAGAGCTGCTTCCTGAGCAAACACTTCCTCTGAGTGGGTATTAGAGCAGCTGCACGTGATGCGTTCAGGGCCCGTAGTTCTCCCTCTACAGGTGTGTCACACAGGAAGAGGGCCGCGTGCTTCAGACACGCCAAACGGGTTCCACAGCGCAGCCTGGGACTGAAGCCGGGAGGTGTGTTTGGAACGGTGCCACAACTACAACGGCTCACCCACCAGgaaccaggagaacgttgtgttccccacagaaccaggagaaccttgtgttccccacagaaccaggGCAGCCCGTAGACCAGAGACACGGACCGGTCCATGTCCCCTGTGTGGGGGGGTCATGAGGTCTAGGTGTGGTTGTGAAATGGCTCCTCCAGGGTCTCGTGTTTAACCCTTTAGCTCTTCTGCTAACGTTAAGAACAGGAACAGTTCACCATGTGGTGACTTCCCAGAGTGCATTTCACCGTGACGTTAACCCCCCCCCCCTCCCTACAGTTAAGATCTTCCTGTTCTACGTGATCTTCTACGGCTGCCTGGCGGGGATCTTCATCGGGACCATCCAGGCTCTGCTGCTCACGCTCAGCAACTACAAGCCCACCTACCAGGACCGGGTGGCCCCCCCAGGTAAGACCCCCCCCCCTCTTGCTGGTCTTCACCTGGTCCAGCTCACACCTCTCAGCTGGTTTTTCTGTATGAAACTCCTAATCTGTAAATAATGTCTCAAAGAGCCTCTACTCACACAGAATACTGGTCGGGTTGgtagaatagaacccagtagagcagaacacagtagagcagaacacagtagagtagagcccagtagagtagagcccagtagagtagagcccagtagagtagaacccagtagagtagaacccagtagagcccagtagagtagaacccagtagagtagagcccagtagagtagagcccagtagagtagaacccagtagagtagagcccagtagagtagaacccagtagagcccagtagaacccagtagagtgggcccagtgagtgaggccagtagagcccagtagagtagaacccagtagagtagaacccagtagagtagagcccagtagagtagagcccagtagagtagaacccagtagagtagagcccagtagagtagaacccagtagagtagagcccagtagagtagaacccagtagagtTCCTGCAGCTTCCTGGTAGAGAACAGGGAGTATCTGCTCAGCTCTCAGGCTAAAAGTTTCCATTGTGAGGGGGGAGGGGCGGGAGGGGGAGGGGCCTCACAGCCTCAGTGCTGCTCACACAACAACAGGCTCACAACTACAGTAACAAACAGAGAGACTGCTGGGAAAAAAAGGTTGTTCACGCCTGAGGAGCCTCAGCTGTGGAAAAGTACTGAGGCTCtgagtgagagagagtgagtgagagagagagtgagtgagagagtgtgagtgagtgagtgagtgagtgtgagtgtgtgtgagagagtgtgtgtgagtgagtgtgtgtgtgtgtgtgagtgagtgtgagagtgagtgtgagagagtgagtgtgagagtgagtgtgagagagtgagtgtgagtgagtgtgtgagagtgagtgtgagagtgagagtgagtgtgagagagtgagtgtgagtgagtgagtgtgagagtgtgagtgagagtgtgagtgagagtgagtgtgagtgagtgtgagtgagtgtgagtgagtgtgagtgtgagtgagtgagtgtgagtgagtgtgtgtgtgagtgagtgtgagtgagtgtgtgtgagtgtgtgagtgtgagagtgaggtgagtgtgagtgagaggaggtgtgtgagtgagtgtgtgagtgtgtgagtgagtgtgtgagtgagagtgagtgtgtgagtgtgagtgaatgagagtgagtgtgagtgtgagagagtgtgtgtgagtgagtgtgagagtgtgtgtgtgagtgagtgtgtgtgagtgtgtgagtgtgtgtgagtgagtgagtgagtgtgagtgagtgtgtgagtgtgtgagtgagtgagtgagtgtgagtgtgtgtgagtgagtgtgagtgagtgtgtgagtgtgtgtgagtgtgtgagtgtgagtgagtgtgagtgtgtgagtgagtgtgtgtgtgtgtgtgagtgagtgtgtgagtgagtgtgtgagtgagtgtgtgtgtgagtgtgagtgagtgtgtgtgagtgtgtgtgtgagtgtgtgtgattgtgattgtgtgtgtgtgtgtgagtgagtgtgtgagtgtgtgtgtgtgagtgtgagtgtgtgagtgagtgagtgtgtgagtgagtgagtgtgtgtgattgtgagtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgattgtgagtgtgattgtgtgagtgtgtgtgtgagtgagtgtgtgagagtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgagtgagtgtgtgtgattgtgagtgtgattgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtttgtgtgtatgtgtgagtgtgagtgagtgtgtgagtgtgtgtgtgagtgtgagagtgtgtgtgtgtgtgagtgtgtgattgtgattgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgagtgtgtgtgagtgagtgagtgtgtgtgtgtgtgtgtgagtgtgtgccaactcagtttgcattatatttacattactattcaaaccagtgaaCTCTGAGAATCAATTTTCTGAATTATCATTAAAACACTTGATATATACGTTTGTGTTTATATATAAATATACTTGACTAAAAACTGAACTATTAGAATCAATGGTttatttaattattattatttatattattaAAAACACTTTACACTCTTTAAGAATCACTAGCTTTATATTTATTGATATTAATTTAAATAATTAATAAAAACAAGGAACTCTGAGAATCAAGTTTACTTTATTGTtaaaaacactttatttatgtatatatatatatatgtatattatattccaggtttgtctatatatgtaataactagggctgtcagcattaacgcgttaatctatgcgattaatttggccacgttaacgcactaaaatattttaacgcaattaacgcaactttgtttacttccggtgttcgttgaagtgtttacactcaaaccgagtgtcaaaccgcggcagtacggtttaacactgtttccgtttttaaaacaatcatttctccgcgaaaataaggatcataaatcagtttaactggtggatgaatcagtcgggtttcctcctgctcctccttcctcccgtctcccctctgagacacaggacggaggggcgacgtgtcggggacgcgcgcgaaagaagaactcgtcatacgaaaccttcaccgtgattggtcaatccgtttgtctggcaacattttggggaaaaaacaaccaatgaacactcagtaaatcacaaaggacctcccacctcacgggtaaggcctgtcagtcagagagcagagaacacggcaccaggacaactgagcctcattgaatagagctgagattgttctggaatgttttatgtataacacgtgggggtgtgtcacatgcaaacgcctttaaaaggtgaatttacatttgtttgtaaaatgtataaaatgagcctccagagggtgaacgtgacatatgtgaatgtcagtcagtcaccaaggccactggttctgctgttcagtggtaaagatgacaggaccaatgtgtctcaatatacttcttttaaaaaaaattaatctgatgtttcactgaagaaacaatttatcatccacaatattaaatacctcgctgcactttataggtaggagcctctttgaaaacacagctctgtgtgaagtttggtctttaaaaagaatgaacttttaacttttaacttttaattgcgattaattaatcgcaatttcaaaatgtgcgattaattagttatttttttaaaatcgattgacagccctagtatttacatgtaTGTACATTATATTTCAGGCCTGTCTCACACTATATAATGTCTATCATGGTGTATGTGTCTCACCTCCAGGcCTGTCTCACACCCCTCGCTCCCTGAAGTCAGAGATCTCCTTCAGCCTGTCTGACCCCTCCTCCTACAAGAAGTACACGGACTCTGTGGACAGCTTCCTGGCTCAGTACGACGAGCCGAGGCAGGCGGACCAGATGAAGTTTGAGGACTGTGGAGGTGAGTATGGGTGcgtggtcctggtggtccgtggtcctggtggtccgtggtcctggtggtccgtggtcctggtggtcctCCTCTGACCCGCCTGTCTCATCAGACTCCCCCATGTCCTACACGGACCGCGGCAGCCTGGACAGCGACCAGGGCCAGAGGAAGGCGTGCCGCTTCCCCCGCTCGCTGCTCGCCGGCTGCTCCGGGGAGGGCGACGCCCACTACGGCTTCAAGGACGGGAAGCCGTGCATCATCGTCAAGCTCAACCGCATCGTCAACTTCAGGCCCAAGGTACACGCCCACCTGGCCGTAGTGCATTGTGGGTAACGTGACTCCGCTAACCCCTCATGGTTGTCTTCAGGCTCCCACTGACAACCAGACGCTCCCTGAGGCCCTGCAGAGCAGCGCCCAGCCCAACCTCATCCCCATCTTCTGCAAGAACAAGGTAGGCTCTGCTGGTTGCTGCTGCTGCAGGCGAGGGGGCGTGTCTCTAACCCCCATGGCGTTTCAGAGAGACGAGGACGCGGACAAGATCGGGGGGATCAAGTACTTCGGCCTGGGCGCCGGCTTCCCCCTGCAGTACTACCCGTACTACGGCAAGCTGCTGCAGCCGCAGTACCTGCAGCCGCTGCTCGCCATCCAGTTCACCAACCTGAGCCGCGACGCAGAGCTGCGCATCGAGTGCAAGGTGTACGGCGACAACATCGGCTACAGCGACAAGGACCGCTACCAGGGCCGCTTCGACGTCAAGTTCACCATCGCCTCGATGTCGGCCAACAAGGCGAGCGACGGCGGCTGGAAGACGTTCGTGTGGAACTCGGAGAAGAAAGAGTTCCTGGGGCGAACCGGCAGCAGTTGGTTTAAGATCTTCCTGTTCTACGTGATCTTCTACGGCTGCCTGGCGGGGATCTTCATCGGGACCATCCAGGCTCTGCTGCTCACGCTCAGCAACTACAAGCCCACCTACCAGGACCGGGTGGCCCCCCCAGGcCTGTCTCACACCCCTCGCTCCCTGAAGTCAGAGATCTCCTTCAGCCTGTCTGACCCCTCCTCCTACAAGAAGTACACGGACTCTGTGGACAGCTTCCTGGCTCAGTACGACGAGCCGAGGCAGGCGGACCAGATGAAGTTTGAGGACTGTGGAGGTGAGTATGGGTGcgtggtcctggtggtggtccgtggtcctggtggtccgtggtcctggtggtcctCCTCTGACCCGCCTGTCTCATCAGACTCCCCCATGTCCTACACGGACCGCGGCAGCCTGGACAGCGACCAGGGCCAGAGGAAGGCGTGCCGCTTCCCCCGCTCGCTGCTCGCCGGCTGCTCCGGGGAGGGCGACGCCCACTACGGCTTCAAGGACGGGAAGCCGTGCATCATCGTCAAGCTCAACCGCATCGTCAACTTCAGGCCCAAGGCTCCCACTGACAACCAGACGCTCCCTGAGGCCCTGCAGAGCAGCGCCCAGCCCAACCTCATCCCCATCTTCTGCAAGAACAAGAGAGACGAGGACGCGGACAAGATCGGGGGGATCAAGTACTTCGGCCTGGGCGCCGGCTTCCCCCTGCAGTACTACCCGTACTACGGCAAGCTGCTGCAGCCGCAGTACCTGCAGCCGCTGCTCGCCATCCAGTTCACCAACCTGAGCCGCGACGCAGAGCTGCGCATCGAGTGCAAGGTGTACGGCGACAACATCGGCTACAGCGACAAGGACCGCTACCAGGGCCGCTTCGACGTCAAGTTCACCATCGCCTCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00287	Na_K-ATPase	Sodium / potassium ATPase beta chain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000402	Family	Sodium/potassium-transporting ATPase subunit beta	Interproscan
IPR038702	Homologous_superfamily	Sodium/potassium-transporting ATPase subunit beta superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11523	SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0005890	Cellular Component	sodium:potassium-exchanging ATPase complex	Interproscan
GO:0006813	Biological Process	potassium ion transport	Interproscan
GO:0006814	Biological Process	sodium ion transport	Interproscan
GO:0006883	Biological Process	intracellular sodium ion homeostasis	Interproscan
GO:0030007	Biological Process	intracellular potassium ion homeostasis	Interproscan
GO:0036376	Biological Process	sodium ion export across plasma membrane	Interproscan
GO:1990573	Biological Process	potassium ion import across plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-